RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 KIAA0087Q14695 138 aa3.98□□□□□ -1.77
RAB3GAP1-207ENST00000539493 A0A087X002 238 aa3.98□□□□□ -1.77
RAB3GAP1-207ENST00000539493 SLURP1P55000 103 aa3.98□□□□□ -1.77
RAB3GAP1-207ENST00000539493 UNC79Q9P2D8 2635 aa3.98□□□□□ -1.77
RAB3GAP1-207ENST00000539493 DNAJC9-AS1A6NH13 148 aa3.98□□□□□ -1.77
RAB3GAP1-207ENST00000539493 KRTAP1-1Q07627 177 aa3.98□□□□□ -1.77
RAB3GAP1-207ENST00000539493 Q75L30 129 aa3.98□□□□□ -1.77
RAB3GAP1-207ENST00000539493 C4orf3Q8WVX3 66 aa3.98□□□□□ -1.77
RAB3GAP1-207ENST00000539493 LIMD2Q9BT23 127 aa3.98□□□□□ -1.77
RAB3GAP1-207ENST00000539493 A8MU10 97 aa3.97□□□□□ -1.77
RAB3GAP1-207ENST00000539493 H3BQ85 93 aa3.97□□□□□ -1.77
RAB3GAP1-207ENST00000539493 SONP18583 2426 aaKnown RBP3.97□□□□□ -1.77
RAB3GAP1-207ENST00000539493 MUC4Q99102 2169 aa3.97□□□□□ -1.77
RAB3GAP1-207ENST00000539493 PSPHP1O15172 72 aa3.97□□□□□ -1.77
RAB3GAP1-207ENST00000539493 IGKV3-20P01619 116 aa3.97□□□□□ -1.77
RAB3GAP1-207ENST00000539493 CDKN2A-AS1Q9UH64 79 aa3.97□□□□□ -1.77
RAB3GAP1-207ENST00000539493 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.77
RAB3GAP1-207ENST00000539493 SMIM1B2RUZ4 78 aa3.96□□□□□ -1.77
RAB3GAP1-207ENST00000539493 Q8N814 137 aa3.96□□□□□ -1.77
RAB3GAP1-207ENST00000539493 TRBV10-1A0A0K0K1A3 114 aa3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 RPL36AP83881 106 aaKnown RBP3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 DEFB114Q30KQ6 69 aa3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 ASB16-AS1Q495Z4 193 aa3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 SERTAD4-AS1Q5TG53 156 aa3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 NKAPP1Q8N9T2 125 aa3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 RPL36ALQ969Q0 106 aaKnown RBP3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 CHCHD7Q9BUK0 85 aa3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 GCN1Q92616 2671 aaKnown RBP3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 ELOF1P60002 83 aaKnown RBP3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 SPINK13Q1W4C9 94 aa3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 Q6ZTI0 123 aa3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
RAB3GAP1-207ENST00000539493 HCG22E2RYF7 251 aa3.95□□□□□ -1.78
RAB3GAP1-207ENST00000539493 IGHV1OR15-1A0A075B7D0 117 aa3.95□□□□□ -1.78
RAB3GAP1-207ENST00000539493 SND1-IT1Q9HBX3 110 aa3.95□□□□□ -1.78
RAB3GAP1-207ENST00000539493 NIPBLQ6KC79 2804 aaeCLIP3.95□□□□□ -1.78
RAB3GAP1-207ENST00000539493 IGHV3-16A0A0C4DH30 117 aa3.94□□□□□ -1.78
RAB3GAP1-207ENST00000539493 CDC42SE2Q9NRR3 84 aa3.94□□□□□ -1.78
RAB3GAP1-207ENST00000539493 ACANP16112 2415 aa3.94□□□□□ -1.78
RAB3GAP1-207ENST00000539493 DEFB131AP59861 70 aa3.94□□□□□ -1.78
RAB3GAP1-207ENST00000539493 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.94□□□□□ -1.78
RAB3GAP1-207ENST00000539493 Q8N9P0 234 aaPredicted RBP3.94□□□□□ -1.78
RAB3GAP1-207ENST00000539493 TRBV6-4A0A1B0GX49 114 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 A8MTW9 85 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 SLPIP03973 132 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 IGKV4-1P06312 121 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 RNASE1P07998 156 aaKnown RBP3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 LINC00242Q5T6M2 205 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 Q9BRP9 147 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 HIGD2AQ9BW72 106 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 FASNP49327 2511 aaKnown RBP3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 OXLD1Q5BKU9 147 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 NTM-AS1Q6ZSK4 140 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 LINC01006Q8NI28 216 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 MAP6D1Q9H9H5 199 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 OTOGQ6ZRI0 2925 aa3.93□□□□□ -1.78
RAB3GAP1-207ENST00000539493 MTORP42345 2549 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 F5H697 171 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 HAMPP81172 84 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 COX6A2Q02221 97 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 CCL24O00175 119 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 FAM74A4Q5TZK3 123 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 HECTD1Q9ULT8 2610 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 SORL1Q92673 2214 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 C3orf84H3BNL1 204 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 CCL18P55774 89 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 LINC00313P59037 77 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 SMR3AQ99954 134 aa3.92□□□□□ -1.78
RAB3GAP1-207ENST00000539493 IGHV3OR16-12A0A075B7B8 117 aa3.91□□□□□ -1.78
RAB3GAP1-207ENST00000539493 NANOS2P60321 138 aaKnown RBP3.91□□□□□ -1.78
RAB3GAP1-207ENST00000539493 SETD2Q9BYW2 2564 aaPredicted RBP3.91□□□□□ -1.78
RAB3GAP1-207ENST00000539493 CHKB-CPT1BH3BT56 60 aa3.91□□□□□ -1.78
RAB3GAP1-207ENST00000539493 M0R2N4 97 aa3.91□□□□□ -1.78
RAB3GAP1-207ENST00000539493 HTN1P15515 57 aa3.91□□□□□ -1.78
RAB3GAP1-207ENST00000539493 ODF3L2Q3SX64 289 aa3.91□□□□□ -1.78
RAB3GAP1-207ENST00000539493 PRM2P04554 102 aa3.9□□□□□ -1.78
RAB3GAP1-207ENST00000539493 MOBPQ13875 183 aa3.9□□□□□ -1.78
RAB3GAP1-207ENST00000539493 K7EQD1 137 aa3.9□□□□□ -1.79
RAB3GAP1-207ENST00000539493 PLAC8Q9NZF1 115 aa3.9□□□□□ -1.79
RAB3GAP1-207ENST00000539493 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
RAB3GAP1-207ENST00000539493 DEFB104AQ8WTQ1 72 aa3.9□□□□□ -1.79
RAB3GAP1-207ENST00000539493 NDUFB1O75438 58 aa3.89□□□□□ -1.79
RAB3GAP1-207ENST00000539493 SETXQ7Z333 2677 aaKnown RBP3.89□□□□□ -1.79
RAB3GAP1-207ENST00000539493 PLA2G1BP04054 148 aaKnown RBP3.89□□□□□ -1.79
RAB3GAP1-207ENST00000539493 PROK1P58294 105 aa3.89□□□□□ -1.79
RAB3GAP1-207ENST00000539493 C9orf116Q5BN46 136 aaPredicted RBP3.89□□□□□ -1.79
RAB3GAP1-207ENST00000539493 MUC7Q8TAX7 377 aa3.89□□□□□ -1.79
RAB3GAP1-207ENST00000539493 LINC00467Q9BRT7 94 aa3.89□□□□□ -1.79
RAB3GAP1-207ENST00000539493 INSP01308 110 aa3.88□□□□□ -1.79
RAB3GAP1-207ENST00000539493 LINC00575Q6W349 94 aa3.88□□□□□ -1.79
RAB3GAP1-207ENST00000539493 WNK1Q9H4A3 2382 aa3.88□□□□□ -1.79
RAB3GAP1-207ENST00000539493 HIVEP2P31629 2446 aa3.88□□□□□ -1.79
RAB3GAP1-207ENST00000539493 LRCOL1A6NCL2 159 aa3.88□□□□□ -1.79
RAB3GAP1-207ENST00000539493 IGHV3-73A0A0B4J1V6 119 aa3.88□□□□□ -1.79
RAB3GAP1-207ENST00000539493 RNASE13Q5GAN3 156 aaKnown RBP3.88□□□□□ -1.79
RAB3GAP1-207ENST00000539493 SPTSSBQ8NFR3 76 aa3.88□□□□□ -1.79
RAB3GAP1-207ENST00000539493 IGLV1-51P01701 117 aa3.87□□□□□ -1.79
RAB3GAP1-207ENST00000539493 MP68P56378 58 aa3.87□□□□□ -1.79
RAB3GAP1-207ENST00000539493 NOTCH2Q04721 2471 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 348.2 ms