RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 Q6ZTC4 211 aa4.91□□□□□ -1.62
TGFBR3-210ENST00000533089 Q6ZQT0 140 aa4.91□□□□□ -1.62
TGFBR3-210ENST00000533089 LINC01546A6NGU7 62 aa4.9□□□□□ -1.62
TGFBR3-210ENST00000533089 REG3GQ6UW15 175 aa4.9□□□□□ -1.62
TGFBR3-210ENST00000533089 Q6ZRU5 148 aa4.9□□□□□ -1.63
TGFBR3-210ENST00000533089 AMELXQ99217 191 aa4.9□□□□□ -1.63
TGFBR3-210ENST00000533089 COX6B2Q6YFQ2 88 aa4.89□□□□□ -1.63
TGFBR3-210ENST00000533089 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
TGFBR3-210ENST00000533089 HIVEP3Q5T1R4 2406 aa4.89□□□□□ -1.63
TGFBR3-210ENST00000533089 UNQ6190/PRO20217Q6UXQ8 127 aa4.89□□□□□ -1.63
TGFBR3-210ENST00000533089 SPACA4Q8TDM5 124 aa4.89□□□□□ -1.63
TGFBR3-210ENST00000533089 LRRK2Q5S007 2527 aa4.89□□□□□ -1.63
TGFBR3-210ENST00000533089 NAV3Q8IVL0 2385 aa4.88□□□□□ -1.63
TGFBR3-210ENST00000533089 KLLNB2CW77 178 aa4.88□□□□□ -1.63
TGFBR3-210ENST00000533089 FP248Q71RG6 208 aaPredicted RBP4.88□□□□□ -1.63
TGFBR3-210ENST00000533089 CDC42SE2Q9NRR3 84 aa4.88□□□□□ -1.63
TGFBR3-210ENST00000533089 ACYP2P14621 99 aa4.88□□□□□ -1.63
TGFBR3-210ENST00000533089 Q1T7F1 81 aa4.88□□□□□ -1.63
TGFBR3-210ENST00000533089 Q8IZM0 81 aa4.88□□□□□ -1.63
TGFBR3-210ENST00000533089 ODF3L2Q3SX64 289 aa4.88□□□□□ -1.63
TGFBR3-210ENST00000533089 PRRC2AP48634 2157 aaKnown RBP4.88□□□□□ -1.63
TGFBR3-210ENST00000533089 DOPEY1Q5JWR5 2465 aa4.88□□□□□ -1.63
TGFBR3-210ENST00000533089 GOLGB1Q14789 3259 aaKnown RBP4.87□□□□□ -1.63
TGFBR3-210ENST00000533089 C11orf72Q8NBR9 251 aa4.87□□□□□ -1.63
TGFBR3-210ENST00000533089 CHCHD7Q9BUK0 85 aa4.87□□□□□ -1.63
TGFBR3-210ENST00000533089 A0A087WSZ3 146 aa4.87□□□□□ -1.63
TGFBR3-210ENST00000533089 C6orf48Q9UBA6 75 aa4.87□□□□□ -1.63
TGFBR3-210ENST00000533089 MIR22HGQ0VDD5 57 aa4.86□□□□□ -1.63
TGFBR3-210ENST00000533089 FAM229BQ4G0N7 80 aa4.86□□□□□ -1.63
TGFBR3-210ENST00000533089 CYSTM1Q9H1C7 97 aa4.86□□□□□ -1.63
TGFBR3-210ENST00000533089 KIF25-AS1Q9Y6Z4 181 aa4.86□□□□□ -1.63
TGFBR3-210ENST00000533089 LOC110117498A0A087WWA1 95 aa4.86□□□□□ -1.63
TGFBR3-210ENST00000533089 IGLV1-51P01701 117 aa4.86□□□□□ -1.63
TGFBR3-210ENST00000533089 C16orf95Q9H693 158 aa4.86□□□□□ -1.63
TGFBR3-210ENST00000533089 OXTP01178 125 aa4.86□□□□□ -1.63
TGFBR3-210ENST00000533089 EGFEM1PQ0D2K5 195 aa4.86□□□□□ -1.63
TGFBR3-210ENST00000533089 FASNP49327 2511 aaKnown RBP4.86□□□□□ -1.63
TGFBR3-210ENST00000533089 H3BPC8 53 aa4.85□□□□□ -1.63
TGFBR3-210ENST00000533089 UQCR11O14957 56 aa4.85□□□□□ -1.63
TGFBR3-210ENST00000533089 SRCAPQ6ZRS2 3230 aa4.85□□□□□ -1.63
TGFBR3-210ENST00000533089 CHTF8P0CG12 524 aa4.85□□□□□ -1.63
TGFBR3-210ENST00000533089 Q9BRP9 147 aa4.85□□□□□ -1.63
TGFBR3-210ENST00000533089 RAI1Q7Z5J4 1906 aaPredicted RBP4.85□□□□□ -1.63
TGFBR3-210ENST00000533089 LYPD5Q6UWN5 251 aa4.84□□□□□ -1.63
TGFBR3-210ENST00000533089 ADAMTS20P59510 1910 aa4.84□□□□□ -1.63
TGFBR3-210ENST00000533089 IGLV4-60A0A075B6I1 120 aa4.84□□□□□ -1.63
TGFBR3-210ENST00000533089 LINC00313P59037 77 aa4.84□□□□□ -1.63
TGFBR3-210ENST00000533089 LINC01600Q96MT4 127 aa4.83□□□□□ -1.64
TGFBR3-210ENST00000533089 ELOF1P60002 83 aaKnown RBP4.83□□□□□ -1.64
TGFBR3-210ENST00000533089 APLNQ9ULZ1 77 aa4.82□□□□□ -1.64
TGFBR3-210ENST00000533089 LINC00588Q9Y4M8 146 aa4.81□□□□□ -1.64
TGFBR3-210ENST00000533089 PTPRBP23467 1997 aa4.81□□□□□ -1.64
TGFBR3-210ENST00000533089 ABCA2Q9BZC7 2435 aa4.8□□□□□ -1.64
TGFBR3-210ENST00000533089 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
TGFBR3-210ENST00000533089 COX8CQ7Z4L0 72 aa4.8□□□□□ -1.64
TGFBR3-210ENST00000533089 TET2Q6N021 2002 aaPredicted RBP4.8□□□□□ -1.64
TGFBR3-210ENST00000533089 KIAA0087Q14695 138 aa4.8□□□□□ -1.64
TGFBR3-210ENST00000533089 LITAFQ99732 161 aa4.79□□□□□ -1.64
TGFBR3-210ENST00000533089 IGLV5-39A0A0G2JS06 123 aa4.79□□□□□ -1.64
TGFBR3-210ENST00000533089 TP53AIP1Q9HCN2 124 aa4.79□□□□□ -1.64
TGFBR3-210ENST00000533089 FAM229AH3BQW9 127 aa4.78□□□□□ -1.64
TGFBR3-210ENST00000533089 C16orf90A8MZG2 172 aa4.78□□□□□ -1.64
TGFBR3-210ENST00000533089 Q6ZRP5 223 aa4.78□□□□□ -1.64
TGFBR3-210ENST00000533089 Q6ZSN1 163 aa4.78□□□□□ -1.64
TGFBR3-210ENST00000533089 C9orf92A6NGG3 77 aa4.77□□□□□ -1.65
TGFBR3-210ENST00000533089 JMJD1CQ15652 2540 aa4.77□□□□□ -1.65
TGFBR3-210ENST00000533089 WDR87Q6ZQQ6 2873 aa4.77□□□□□ -1.65
TGFBR3-210ENST00000533089 TRBV7-4A0A0J9YYF1 115 aa4.77□□□□□ -1.65
TGFBR3-210ENST00000533089 RPL37AP61513 92 aaKnown RBP4.77□□□□□ -1.65
TGFBR3-210ENST00000533089 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
TGFBR3-210ENST00000533089 PCSK5Q92824 1860 aa4.77□□□□□ -1.65
TGFBR3-210ENST00000533089 Q75L30 129 aa4.77□□□□□ -1.65
TGFBR3-210ENST00000533089 USP9XQ93008 2570 aaPredicted RBP4.76□□□□□ -1.65
TGFBR3-210ENST00000533089 MYO9AB2RTY4 2548 aa4.76□□□□□ -1.65
TGFBR3-210ENST00000533089 K7EQZ3 153 aa4.76□□□□□ -1.65
TGFBR3-210ENST00000533089 USP9YO00507 2555 aaPredicted RBP4.76□□□□□ -1.65
TGFBR3-210ENST00000533089 CPAMD8Q8IZJ3 1885 aa4.76□□□□□ -1.65
TGFBR3-210ENST00000533089 CRIPTQ9P021 101 aa4.76□□□□□ -1.65
TGFBR3-210ENST00000533089 C22orf24Q9Y442 160 aa4.76□□□□□ -1.65
TGFBR3-210ENST00000533089 C9orf129Q5T035 196 aaKnown RBP4.75□□□□□ -1.65
TGFBR3-210ENST00000533089 PRR26Q8N8Z3 221 aa4.75□□□□□ -1.65
TGFBR3-210ENST00000533089 UTRNP46939 3433 aa4.74□□□□□ -1.65
TGFBR3-210ENST00000533089 MOBPQ13875 183 aa4.74□□□□□ -1.65
TGFBR3-210ENST00000533089 Q96NJ1 140 aa4.74□□□□□ -1.65
TGFBR3-210ENST00000533089 ABCA12Q86UK0 2595 aa4.74□□□□□ -1.65
TGFBR3-210ENST00000533089 A0A1B0GUV1 79 aa4.74□□□□□ -1.65
TGFBR3-210ENST00000533089 Q5VV11 94 aa4.74□□□□□ -1.65
TGFBR3-210ENST00000533089 FLNBO75369 2602 aaKnown RBP4.73□□□□□ -1.65
TGFBR3-210ENST00000533089 KRTAP24-1Q3LI83 254 aa4.73□□□□□ -1.65
TGFBR3-210ENST00000533089 MUC4Q99102 2169 aa4.73□□□□□ -1.65
TGFBR3-210ENST00000533089 CHD9Q3L8U1 2897 aa4.73□□□□□ -1.65
TGFBR3-210ENST00000533089 A0A1B0GW54 56 aa4.72□□□□□ -1.65
TGFBR3-210ENST00000533089 EIF4EBP3O60516 100 aaPredicted RBP4.72□□□□□ -1.65
TGFBR3-210ENST00000533089 ST20-AS1Q8NBB2 130 aa4.72□□□□□ -1.65
TGFBR3-210ENST00000533089 KRTAP16-1A8MUX0 517 aa4.72□□□□□ -1.65
TGFBR3-210ENST00000533089 Q8NBF4 154 aa4.72□□□□□ -1.65
TGFBR3-210ENST00000533089 LINC00476Q8WZB0 136 aa4.72□□□□□ -1.65
TGFBR3-210ENST00000533089 CENPFP49454 3210 aa4.72□□□□□ -1.65
TGFBR3-210ENST00000533089 SMR3BP02814 79 aaPredicted RBP4.72□□□□□ -1.65
TGFBR3-210ENST00000533089 RTL8CO15255 209 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms