RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 UBE2D1P51668 147 aa2.44□□□□□ -2.02
C11orf54-208ENST00000530279 RPL39P62891 51 aaKnown RBP2.44□□□□□ -2.02
C11orf54-208ENST00000530279 HERVK_113P63121 156 aa2.44□□□□□ -2.02
C11orf54-208ENST00000530279 SYCNQ0VAF6 134 aa2.44□□□□□ -2.02
C11orf54-208ENST00000530279 FABP9Q0Z7S8 132 aa2.44□□□□□ -2.02
C11orf54-208ENST00000530279 CLPSL2Q6UWE3 100 aa2.44□□□□□ -2.02
C11orf54-208ENST00000530279 Q6ZUT4 128 aa2.44□□□□□ -2.02
C11orf54-208ENST00000530279 TOMM6Q96B49 74 aa2.44□□□□□ -2.02
C11orf54-208ENST00000530279 SMCO4Q9NRQ5 59 aa2.44□□□□□ -2.02
C11orf54-208ENST00000530279 MRPL35Q9NZE8 188 aaKnown RBP2.44□□□□□ -2.02
C11orf54-208ENST00000530279 PLAC8Q9NZF1 115 aa2.44□□□□□ -2.02
C11orf54-208ENST00000530279 HSPG2P98160 4391 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 IGKV3OR2-268A0A0C4DH90 116 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 TRBV30A0A0K0K1B3 111 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 LOC107984640A0A0U1RRK4 108 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 NMUP48645 174 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 Q5VSD8 79 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 SFTA2Q6UW10 78 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 FA2HQ7L5A8 372 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 SCXQ7RTU7 201 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 CIRBP-AS1Q8TBR5 109 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 SPACA4Q8TDM5 124 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 DEFB104AQ8WTQ1 72 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 CARD19Q96LW7 228 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 TRAPPC1Q9Y5R8 145 aa2.43□□□□□ -2.02
C11orf54-208ENST00000530279 APOBP04114 4563 aaKnown RBP2.43□□□□□ -2.02
C11orf54-208ENST00000530279 LOC389332A0A1B0GUA5 103 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 TINCRA0A1B0GVN0 87 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.42□□□□□ -2.02
C11orf54-208ENST00000530279 NDUFA1O15239 70 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 LINC00614P0C842 121 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 CXCL5P42830 114 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 UBE2AP49459 152 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 PMVKQ15126 192 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 LINC00173Q6ZV60 143 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 MRPL55Q7Z7F7 128 aaKnown RBP2.42□□□□□ -2.02
C11orf54-208ENST00000530279 Q8IZM0 81 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 C18orf32Q8TCD1 76 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 CHCHD1Q96BP2 118 aaKnown RBP2.42□□□□□ -2.02
C11orf54-208ENST00000530279 YPEL4Q96NS1 127 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 SCGB3A1Q96QR1 104 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 CAMK2N2Q96S95 79 aa2.42□□□□□ -2.02
C11orf54-208ENST00000530279 H0Y9J4 135 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 H3BRM9 83 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 OXTP01178 125 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 HBDP02042 147 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 INAFM2P0DMQ5 153 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 COX6A2Q02221 97 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 SPAG11BQ08648 103 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 PDZD11Q5EBL8 140 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 C5orf38Q86SI9 138 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 ORAOV1Q8WV07 137 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 PACRGQ96M98 296 aaPredicted RBP2.41□□□□□ -2.02
C11orf54-208ENST00000530279 CST9LQ9H4G1 147 aa2.41□□□□□ -2.02
C11orf54-208ENST00000530279 TRAV12-1A0A0B4J245 112 aa2.4□□□□□ -2.03
C11orf54-208ENST00000530279 NDUFC2-KCTD14E9PQ53 114 aa2.4□□□□□ -2.03
C11orf54-208ENST00000530279 F8VRH5 84 aa2.4□□□□□ -2.03
C11orf54-208ENST00000530279 IGLC3P0DOY3 106 aa2.4□□□□□ -2.03
C11orf54-208ENST00000530279 FUSP35637 526 aaKnown RBP eCLIP2.4□□□□□ -2.03
C11orf54-208ENST00000530279 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.03
C11orf54-208ENST00000530279 RPL37AP61513 92 aaKnown RBP2.4□□□□□ -2.03
C11orf54-208ENST00000530279 RNASE13Q5GAN3 156 aaKnown RBP2.4□□□□□ -2.03
C11orf54-208ENST00000530279 Q6ZRU5 148 aa2.4□□□□□ -2.03
C11orf54-208ENST00000530279 DPH3Q96FX2 82 aa2.4□□□□□ -2.03
C11orf54-208ENST00000530279 CDKN2A-AS1Q9UH64 79 aa2.4□□□□□ -2.03
C11orf54-208ENST00000530279 PCLOQ9Y6V0 5065 aa2.4□□□□□ -2.03
C11orf54-208ENST00000530279 FAT1Q14517 4588 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 A0A096LNI7 61 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 A0A096LNJ9 63 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 A0A0J9YXV3 536 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 PANO1I0J062 215 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 SMR3BP02814 79 aaPredicted RBP2.39□□□□□ -2.03
C11orf54-208ENST00000530279 CKS1BP61024 79 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 COX17Q14061 63 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 PCP2Q8IVA1 136 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 LINC00469Q8N7U9 141 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 TP73-AS1Q9UF72 201 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 VPS13BQ7Z7G8 4022 aa2.39□□□□□ -2.03
C11orf54-208ENST00000530279 IGKV2-24A0A0C4DH68 120 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 COLCA2A8K830 154 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 A8MU10 97 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 LINC00587B1AMM8 73 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 VAMP3Q15836 100 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 C9orf116Q5BN46 136 aaPredicted RBP2.38□□□□□ -2.03
C11orf54-208ENST00000530279 UNQ6190/PRO20217Q6UXQ8 127 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 BAGE3Q86Y29 109 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 CBLN2Q8IUK8 224 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 IFI27L1Q96BM0 104 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 LINC00526Q96FQ7 95 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 C6orf48Q9UBA6 75 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 HSPB8Q9UJY1 196 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 DNAH8Q96JB1 4490 aa2.38□□□□□ -2.03
C11orf54-208ENST00000530279 IGLV1-50A0A075B6I6 118 aa2.37□□□□□ -2.03
C11orf54-208ENST00000530279 TRGC2P03986 189 aa2.37□□□□□ -2.03
C11orf54-208ENST00000530279 ZNF22P17026 224 aaPredicted RBP2.37□□□□□ -2.03
C11orf54-208ENST00000530279 PLNP26678 52 aa2.37□□□□□ -2.03
C11orf54-208ENST00000530279 AKR1D1P51857 326 aa2.37□□□□□ -2.03
C11orf54-208ENST00000530279 PRR3P79522 188 aaKnown RBP2.37□□□□□ -2.03
C11orf54-208ENST00000530279 RPL18AQ02543 176 aaKnown RBP2.37□□□□□ -2.03
C11orf54-208ENST00000530279 SPINK6Q6UWN8 80 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms