RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 A0A1B0GUT8 65 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 H0Y9P7 68 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 PIN1P1O15428 100 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 SFTA3P0C7M3 94 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 ACYP2P14621 99 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 SPATA8Q6RVD6 105 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 SMIM11BQ8TCY0 68 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 TMEM263Q8WUH6 116 aaKnown RBP0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 OBSCN-AS1Q96MR7 158 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 CCL19Q99731 98 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 ASXL3Q9C0F0 2248 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 GLI2P10070 1586 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 UGGT1Q9NYU2 1555 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 NRAPQ86VF7 1730 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 CNTRLQ7Z7A1 2325 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 ABCC6O95255 1503 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 LRRC7Q96NW7 1537 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 ZNF831Q5JPB2 1677 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 FAM208BQ5VWN6 2430 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 NOTCH1P46531 2555 aa0.43□□□□□ -2.34
SCARNA16.2-201ENST00000516520 TNCP24821 2201 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 GOLGA4Q13439 2230 aaKnown RBP0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 LAMC1P11047 1609 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 ADCY10Q96PN6 1610 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 BIVM-ERCC5R4GMW8 1640 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 DOT1LQ8TEK3 1739 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 SSC5DA1L4H1 1573 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 TRBV6-1A0A0K0K1D8 114 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 LCE6AA0A183 80 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 M0R3E3 92 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 NCR3O14931 201 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 C3orf79P0CE67 100 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 SPINT3P49223 89 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 FXYD6P3P58550 94 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 GNGT1P63211 74 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 ATXN8Q156A1 80 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 C10orf113Q5VZT2 155 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 PLAC4Q8WY50 150 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 LINC00472Q9H8W2 130 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 PROK2Q9HC23 129 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 JMJD1CQ15652 2540 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 CNOT1A5YKK6 2376 aaKnown RBP0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 NRXN3Q9Y4C0 1643 aa0.42□□□□□ -2.34
SCARNA16.2-201ENST00000516520 DDX60LQ5H9U9 1706 aaKnown RBP0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 NWD1Q149M9 1564 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 FXYD6-FXYD2A0A087WZ82 144 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 GVQW2A0A096LPI5 108 aaPredicted RBP0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 A0A0D9SFI3 127 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 G3V318 75 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 KRTAP10-4P60372 401 aaPredicted RBP0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 RPL37P61927 97 aaKnown RBP0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 Q6ZRX8 168 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 DEFB107AQ8IZN7 70 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 FDCSPQ8NFU4 85 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 GNG13Q9P2W3 67 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 TULP4Q9NRJ4 1543 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 DOPEY2Q9Y3R5 2298 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 NESP48681 1621 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 TJP1Q07157 1748 aa0.41□□□□□ -2.34
SCARNA16.2-201ENST00000516520 IQGAP2Q13576 1575 aa0.4□□□□□ -2.34
SCARNA16.2-201ENST00000516520 TOP2AP11388 1531 aaKnown RBP0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 CACNA1EQ15878 2313 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 ABCA5Q8WWZ7 1642 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 TRAV21A0A0B4J279 112 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 A0A1B0GU69 56 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 SNRPGP15A8MWD9 76 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 H3BVH4 76 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 K7EIL1 84 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 LY6G6CO95867 125 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 IFI6P09912 130 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 S100A3P33764 101 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 SPINK7P58062 85 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 RPL38P63173 70 aaKnown RBP0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 NREPQ16612 68 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 DEFB112Q30KQ8 113 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 HILPDAQ9Y5L2 63 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 COL6A6A6NMZ7 2263 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 ABCC8Q09428 1581 aa0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 FAM208AQ9UK61 1670 aaKnown RBP0.4□□□□□ -2.35
SCARNA16.2-201ENST00000516520 PLCE1Q9P212 2302 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 AHNAK2Q8IVF2 5795 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 SLIT1O75093 1534 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 CPS1P31327 1500 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 KIAA0586Q9BVV6 1533 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 COX7BP24311 80 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 HAMPP81172 84 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 DEFB114Q30KQ6 69 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 UBE2DNLQ8IWF7 75 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 WFDC9Q8NEX5 89 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 GAFA1Q96PS6 74 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 UBL5Q9BZL1 73 aa0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 PTPRZ1P23471 2315 aaPredicted RBP0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 TNRC6CQ9HCJ0 1690 aaKnown RBP0.39□□□□□ -2.35
SCARNA16.2-201ENST00000516520 EFCAB6Q5THR3 1501 aa0.38□□□□□ -2.35
SCARNA16.2-201ENST00000516520 ROS1P08922 2347 aa0.38□□□□□ -2.35
SCARNA16.2-201ENST00000516520 C2CD3Q4AC94 2353 aa0.38□□□□□ -2.35
SCARNA16.2-201ENST00000516520 LINC00959A0A1B0GUT2 108 aa0.38□□□□□ -2.35
SCARNA16.2-201ENST00000516520 LINC01549A6NIU2 74 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms