RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 HAMPP81172 84 aa3.26□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 SPINK13Q1W4C9 94 aa3.26□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 SSC5DA1L4H1 1573 aa3.25□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 NWD1Q149M9 1564 aa3.25□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 AGLP35573 1532 aa3.25□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 A0A1B0GVY2 172 aa3.25□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 LINC00959A0A1B0GUT2 108 aa3.24□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 ABCA1O95477 2261 aa3.23□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 NMES1Q9C002 83 aa3.23□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 PLXNB2O15031 1838 aa3.22□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 F5P12259 2224 aa3.22□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 NDUFA4O00483 81 aa3.22□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 COX7BP24311 80 aa3.22□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
RNU6ATAC39P-201ENST00000516309 DEFB103AP81534 67 aa3.21□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 CMC2Q9NRP2 79 aa3.21□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 CDC42BPAQ5VT25 1732 aa3.2□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 RPL38P63173 70 aaKnown RBP3.2□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 KRTAP13-4Q3LI77 160 aa3.2□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 BRD3OSQ6XYD6 125 aa3.2□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 TRPM2O94759 1503 aa3.19□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 SSBP3-AS1Q7Z2R9 100 aa3.18□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 SERF2P84101 59 aa3.17□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 LY6G6CO95867 125 aa3.16□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 CACNA1GO43497 2377 aa3.15□□□□□ -1.9
RNU6ATAC39P-201ENST00000516309 PRB2P02812 416 aaPredicted RBP3.15□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 DEFB114Q30KQ6 69 aa3.15□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 PLNP26678 52 aa3.13□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 ABRACLQ9P1F3 81 aa3.13□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 TOGARAM1Q9Y4F4 1720 aa3.13□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 KRTAP10-1P60331 282 aa3.12□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 TULP4Q9NRJ4 1543 aa3.12□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 CADP27708 2225 aa3.12□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 ASCC3Q8N3C0 2202 aaKnown RBP3.12□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 K7EMI3 77 aa3.11□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 KRTAP10-3P60369 221 aa3.1□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 KCNQ1DNQ9H478 68 aa3.1□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 NFAT5O94916 1531 aa3.09□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 CPSF4LA6NMK7 179 aaKnown RBP3.09□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 M0R1W7 72 aa3.09□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 UBE2DNLQ8IWF7 75 aa3.09□□□□□ -1.91
RNU6ATAC39P-201ENST00000516309 SPTY2D1-AS1A0A0U1RR47 76 aa3.08□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 ARL14EPLP0DKL9 152 aa3.07□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 PCOTHQ58A44 107 aa3.07□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 DDX60Q8IY21 1712 aaKnown RBP3.07□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 NOTCH3Q9UM47 2321 aa3.07□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 PRB1P04280 392 aa3.06□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 TNCP24821 2201 aa3.05□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 ETDCA0A1B0GVM5 59 aa3.05□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 SMIM27A0A1W2PRY6 76 aa3.05□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 MRPL33O75394 65 aaKnown RBP3.05□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 BAHCC1Q9P281 2608 aa3.05□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 DEPDC5O75140 1603 aa3.04□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 IGIPA6NJ69 53 aa3.04□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 ANGP03950 147 aaKnown RBP3.04□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 CACNA1BQ00975 2339 aa3.03□□□□□ -1.92
RNU6ATAC39P-201ENST00000516309 I3L3M4 83 aa3.02□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 FXYD6P3P58550 94 aa3.02□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 ATP7AQ04656 1500 aa3.02□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 TNRC6CQ9HCJ0 1690 aaKnown RBP3.01□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 KRTAP13-3Q3SY46 172 aa3.01□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 TECTAO75443 2155 aa3.01□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 ANKRD17O75179 2603 aaKnown RBP3.01□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 C4AP0C0L4 1744 aa2.99□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 URB1O60287 2271 aaKnown RBP2.98□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 DEFB131BA0A096LNP1 70 aa2.98□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 COX6B1P14854 86 aa2.98□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 ASXL3Q9C0F0 2248 aa2.98□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 C4BP0C0L5 1744 aa2.97□□□□□ -1.93
RNU6ATAC39P-201ENST00000516309 IQGAP1P46940 1657 aa2.95□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 CRIPTQ9P021 101 aa2.95□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 LINC01546A6NGU7 62 aa2.94□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 K7EIL1 84 aa2.93□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 USMG5Q96IX5 58 aa2.93□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 KIF21BO75037 1637 aa2.93□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 AHCTF1Q8WYP5 2266 aa2.93□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 H0YGX0 51 aa2.92□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 DEFB119Q8N690 84 aa2.92□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 KNTC1P50748 2209 aa2.92□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 SAMD9LQ8IVG5 1584 aa2.91□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 KRTAP12-1P59990 96 aa2.91□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 TP53AIP1Q9HCN2 124 aa2.91□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 ZDBF2Q9HCK1 2354 aa2.9□□□□□ -1.94
RNU6ATAC39P-201ENST00000516309 PIGYQ3MUY2 71 aa2.9□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 I3L2K1 104 aa2.88□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 DEFB123Q8N688 67 aa2.87□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 TIMM8BQ9Y5J9 83 aaPredicted RBP2.87□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 NAV3Q8IVL0 2385 aa2.87□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 KRTAP10-10P60014 251 aa2.86□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 FLG2Q5D862 2391 aaPredicted RBP2.85□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 LYNX1P0DP58 116 aa2.85□□□□□ -1.95
RNU6ATAC39P-201ENST00000516309 MROH2BQ7Z745 1585 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms