RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 ESPL1Q14674 2120 aa2.18□□□□□ -2.06
CHD1-209ENST00000512844 TANC2Q9HCD6 1990 aa2.18□□□□□ -2.06
CHD1-209ENST00000512844 TEX49A0A1B0GTD5 131 aa2.17□□□□□ -2.06
CHD1-209ENST00000512844 NUPR2A6NF83 97 aa2.17□□□□□ -2.06
CHD1-209ENST00000512844 H3BUA1 57 aa2.17□□□□□ -2.06
CHD1-209ENST00000512844 IGHV3-30P01768 117 aa2.17□□□□□ -2.06
CHD1-209ENST00000512844 IGHV3-30-5P0DP03 117 aa2.17□□□□□ -2.06
CHD1-209ENST00000512844 EFNA4P52798 201 aa2.17□□□□□ -2.06
CHD1-209ENST00000512844 ELOF1P60002 83 aaKnown RBP2.17□□□□□ -2.06
CHD1-209ENST00000512844 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.17□□□□□ -2.06
CHD1-209ENST00000512844 LINC01600Q96MT4 127 aa2.17□□□□□ -2.06
CHD1-209ENST00000512844 PTPRBP23467 1997 aa2.17□□□□□ -2.06
CHD1-209ENST00000512844 MYO9BQ13459 2157 aa2.17□□□□□ -2.06
CHD1-209ENST00000512844 FREM1Q5H8C1 2179 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 DIDO1Q9BTC0 2240 aaKnown RBP2.16□□□□□ -2.06
CHD1-209ENST00000512844 A0A0G2JQZ4 141 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 TRBV6-5A0A0K0K1A5 114 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 TRBV6-4A0A1B0GX49 114 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 NDUFA4O00483 81 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 COX6B1P14854 86 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 ZNF56Q15929 161 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 KLK9Q2XQG4 91 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 CSAG1Q6PB30 78 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 VMO1Q7Z5L0 202 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 LINC00643Q86TS7 51 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 USMG5Q96IX5 58 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 ODF3Q96PU9 254 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 LINC00474Q9P2X8 69 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 PCNTO95613 3336 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 HTTP42858 3142 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 FAM186AA6NE01 2351 aa2.16□□□□□ -2.06
CHD1-209ENST00000512844 CEP350Q5VT06 3117 aa2.15□□□□□ -2.07
CHD1-209ENST00000512844 JMJD7-PLA2G4BH0Y9G9 81 aa2.15□□□□□ -2.07
CHD1-209ENST00000512844 I3L3M4 83 aa2.15□□□□□ -2.07
CHD1-209ENST00000512844 DNAL4O96015 105 aa2.15□□□□□ -2.07
CHD1-209ENST00000512844 SFTA2Q6UW10 78 aa2.15□□□□□ -2.07
CHD1-209ENST00000512844 Q8N6K4 173 aa2.15□□□□□ -2.07
CHD1-209ENST00000512844 BRWD1Q9NSI6 2320 aa2.15□□□□□ -2.07
CHD1-209ENST00000512844 DNAJC13O75165 2243 aa2.15□□□□□ -2.07
CHD1-209ENST00000512844 TRANK1O15050 2925 aa2.14□□□□□ -2.07
CHD1-209ENST00000512844 AHCTF1Q8WYP5 2266 aa2.14□□□□□ -2.07
CHD1-209ENST00000512844 TRGV4A0A0C4DH28 118 aa2.14□□□□□ -2.07
CHD1-209ENST00000512844 IGIPA6NJ69 53 aa2.14□□□□□ -2.07
CHD1-209ENST00000512844 CHKB-CPT1BH3BT56 60 aa2.14□□□□□ -2.07
CHD1-209ENST00000512844 POLR2KP53803 58 aaKnown RBP2.14□□□□□ -2.07
CHD1-209ENST00000512844 FAM74A4Q5TZK3 123 aa2.14□□□□□ -2.07
CHD1-209ENST00000512844 MUSTN1Q8IVN3 82 aa2.14□□□□□ -2.07
CHD1-209ENST00000512844 TMEM263Q8WUH6 116 aaKnown RBP2.14□□□□□ -2.07
CHD1-209ENST00000512844 DOCK10Q96BY6 2186 aa2.14□□□□□ -2.07
CHD1-209ENST00000512844 CHD9Q3L8U1 2897 aa2.13□□□□□ -2.07
CHD1-209ENST00000512844 TNCP24821 2201 aa2.13□□□□□ -2.07
CHD1-209ENST00000512844 A0A0C4DFX4 3053 aa2.13□□□□□ -2.07
CHD1-209ENST00000512844 PDE6GP18545 87 aa2.13□□□□□ -2.07
CHD1-209ENST00000512844 KLKP1Q107X0 134 aa2.13□□□□□ -2.07
CHD1-209ENST00000512844 DEFB121Q5J5C9 76 aa2.13□□□□□ -2.07
CHD1-209ENST00000512844 ATP5EP2Q5VTU8 51 aa2.13□□□□□ -2.07
CHD1-209ENST00000512844 DEFB124Q8NES8 71 aa2.13□□□□□ -2.07
CHD1-209ENST00000512844 RPL39LQ96EH5 51 aaKnown RBP2.13□□□□□ -2.07
CHD1-209ENST00000512844 SDK1Q7Z5N4 2213 aa2.13□□□□□ -2.07
CHD1-209ENST00000512844 NAV3Q8IVL0 2385 aa2.13□□□□□ -2.07
CHD1-209ENST00000512844 HEATR1Q9H583 2144 aaKnown RBP2.12□□□□□ -2.07
CHD1-209ENST00000512844 CLPSL1A2RUU4 121 aa2.12□□□□□ -2.07
CHD1-209ENST00000512844 H0YGX0 51 aa2.12□□□□□ -2.07
CHD1-209ENST00000512844 NDUFA1O15239 70 aa2.12□□□□□ -2.07
CHD1-209ENST00000512844 RHPN1-AS1Q9BWJ2 59 aa2.12□□□□□ -2.07
CHD1-209ENST00000512844 CHD7Q9P2D1 2997 aa2.12□□□□□ -2.07
CHD1-209ENST00000512844 KNTC1P50748 2209 aa2.11□□□□□ -2.07
CHD1-209ENST00000512844 INTS1Q8N201 2190 aaKnown RBP2.11□□□□□ -2.07
CHD1-209ENST00000512844 H7BZZ5 65 aa2.11□□□□□ -2.07
CHD1-209ENST00000512844 M0QY20 66 aa2.11□□□□□ -2.07
CHD1-209ENST00000512844 RNASE3P12724 160 aaKnown RBP2.11□□□□□ -2.07
CHD1-209ENST00000512844 RPL39P62891 51 aaKnown RBP2.11□□□□□ -2.07
CHD1-209ENST00000512844 Q6JHZ5 121 aa2.11□□□□□ -2.07
CHD1-209ENST00000512844 C5orf56Q8N8D9 126 aa2.11□□□□□ -2.07
CHD1-209ENST00000512844 AMELXQ99217 191 aa2.11□□□□□ -2.07
CHD1-209ENST00000512844 SNURFQ9Y675 71 aa2.11□□□□□ -2.07
CHD1-209ENST00000512844 CEP290O15078 2479 aa2.11□□□□□ -2.07
CHD1-209ENST00000512844 MALRD1Q5VYJ5 2156 aa2.1□□□□□ -2.07
CHD1-209ENST00000512844 CENPFP49454 3210 aa2.1□□□□□ -2.07
CHD1-209ENST00000512844 IGKV3-7A0A075B6H7 116 aa2.1□□□□□ -2.07
CHD1-209ENST00000512844 TRAV22A0A0B4J277 110 aa2.1□□□□□ -2.07
CHD1-209ENST00000512844 LYNX1G3V0Z9 82 aa2.1□□□□□ -2.07
CHD1-209ENST00000512844 LYNX1P0DP58 116 aa2.1□□□□□ -2.07
CHD1-209ENST00000512844 TPRXLQ17RH7 258 aa2.1□□□□□ -2.07
CHD1-209ENST00000512844 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
CHD1-209ENST00000512844 WFDC10AQ9H1F0 79 aa2.1□□□□□ -2.07
CHD1-209ENST00000512844 MED13Q9UHV7 2174 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 G3V318 75 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 COA5Q86WW8 74 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 C20orf197Q8N268 126 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 DEFB123Q8N688 67 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 LINC00308Q8TCZ7 52 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 COX7B2Q8TF08 81 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 UBL5Q9BZL1 73 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 PRO3102Q9H379 93 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 OTOGLQ3ZCN5 2332 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 PLCE1Q9P212 2302 aa2.09□□□□□ -2.07
CHD1-209ENST00000512844 PRB3Q04118 309 aaPredicted RBP2.08□□□□□ -2.08
CHD1-209ENST00000512844 SPACA4Q8TDM5 124 aa2.08□□□□□ -2.08
CHD1-209ENST00000512844 CDC42SE2Q9NRR3 84 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms