RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 GCHFRP30047 84 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 MIC13Q5XKP0 118 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 Q6ZQY7 126 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 MGST2Q99735 147 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 SMR3AQ99954 134 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 NDUFA4L2Q9NRX3 87 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 TMEM167BQ9NRX6 74 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 ARL2-SNX15V9GYD0 113 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 ZNF462Q96JM2 2506 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 CREBBPQ92793 2442 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 CADP27708 2225 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 KALRNO60229 2985 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 PIEZO2Q9H5I5 2752 aa1.4□□□□□ -2.19
HMGB1P47-201ENST00000511281 FASNP49327 2511 aaKnown RBP1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 SPG11Q96JI7 2443 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 MYO18BQ8IUG5 2567 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 DOPEY1Q5JWR5 2465 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 IGLC7A0M8Q6 106 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 OOSP1A8MZH6 123 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 F6UZH7 168 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 LYNX1G3V0Z9 82 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 M0R2Z0 102 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 CORTO00230 105 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 LINC00694P0DN24 101 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 UBE2L3P68036 154 aaKnown RBP1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 PRB3Q04118 309 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 WT1-ASQ06250 92 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 ADIRFQ15847 76 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 MINOS1Q5TGZ0 78 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 PPDPFLQ8WWR9 84 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 NPVFQ9HCQ7 196 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 TMEM242Q9NWH2 141 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 ABCA4P78363 2273 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 UBR5O95071 2799 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 DNAJC13O75165 2243 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 FBN2P35556 2912 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 PTPN13Q12923 2485 aa1.39□□□□□ -2.19
HMGB1P47-201ENST00000511281 DOPEY2Q9Y3R5 2298 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 LRRK2Q5S007 2527 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 PLCE1Q9P212 2302 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 USP9YO00507 2555 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 I3L2K1 104 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 K7EIL1 84 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 NDUFA3O95167 84 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 IGKCP01834 107 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 S100A8P05109 93 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 IGLC1P0CG04 106 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 SMIM6P0DI80 62 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 S100PP25815 95 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 FXYD3Q14802 87 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 PLGLAQ15195 96 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 C10orf99Q6UWK7 81 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 VMO1Q7Z5L0 202 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 ATOH7Q8N100 152 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 FAM167A-AS1Q96KT0 104 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 PFDN5Q99471 154 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 TRGV9Q99603 122 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 TCEAL7Q9BRU2 100 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 BPESC1Q9GZL8 116 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 PRRC2CQ9Y520 2896 aaKnown RBP1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 USF3Q68DE3 2245 aa1.38□□□□□ -2.19
HMGB1P47-201ENST00000511281 CFAP46Q8IYW2 2715 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 TRBV30A0A0K0K1B3 111 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 HIGD1CA8MV81 97 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 J3QR89 54 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 K7EIM0 57 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 APELAP0DMC3 54 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 PYYP10082 97 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 GNG4P50150 75 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 C10orf113Q5VZT2 155 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 BAGE2Q86Y30 109 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 C12orf57Q99622 126 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 CCL19Q99731 98 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 HILPDAQ9Y5L2 63 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 SETXQ7Z333 2677 aaKnown RBP1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 ZNF469Q96JG9 3925 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 AKAP9Q99996 3911 aa1.37□□□□□ -2.19
HMGB1P47-201ENST00000511281 SPTBN1Q01082 2364 aaKnown RBP1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 TRAV30A0A087WSZ9 112 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 TRBV6-1A0A0K0K1D8 114 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 NBDYA0A0U1RRE5 68 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 FAM236AA0A1B0GUQ0 79 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 FAM236BA0A1B0GV22 79 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 SMIM27A0A1W2PRY6 76 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 NPFFO15130 113 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 GNG7O60262 68 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 IGLC2P0DOY2 106 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 CBLN1P23435 193 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 AKAP6Q13023 2319 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 KLK9Q2XQG4 91 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 Q56UQ5 140 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 Q86TA4 180 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 TTC9CQ8N5M4 171 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 FAM103A1Q9BTL3 118 aaKnown RBP1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 V9GYV3 84 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 PDZD2O15018 2839 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 MED13LQ71F56 2210 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 USP9XQ93008 2570 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 ESPL1Q14674 2120 aa1.36□□□□□ -2.19
HMGB1P47-201ENST00000511281 HECTD1Q9ULT8 2610 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms