RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 IGHV3-16A0A0C4DH30 117 aa4.05□□□□□ -1.76
SOX2-OT-218ENST00000498731 SOCS3O14543 225 aa4.05□□□□□ -1.76
SOX2-OT-218ENST00000498731 IGHV3-53P01767 116 aa4.05□□□□□ -1.76
SOX2-OT-218ENST00000498731 Q6ZSN1 163 aa4.05□□□□□ -1.76
SOX2-OT-218ENST00000498731 SMIM11BQ8TCY0 68 aa4.05□□□□□ -1.76
SOX2-OT-218ENST00000498731 WFDC10AQ9H1F0 79 aa4.05□□□□□ -1.76
SOX2-OT-218ENST00000498731 NDUFC2-KCTD14E9PQ53 114 aa4.04□□□□□ -1.76
SOX2-OT-218ENST00000498731 K7EQG2 157 aa4.04□□□□□ -1.76
SOX2-OT-218ENST00000498731 PRB2P02812 416 aaPredicted RBP4.04□□□□□ -1.76
SOX2-OT-218ENST00000498731 FSHBP01225 129 aa4.04□□□□□ -1.76
SOX2-OT-218ENST00000498731 IGHV1OR15-1A0A075B7D0 117 aa4.04□□□□□ -1.76
SOX2-OT-218ENST00000498731 ODF3L2Q3SX64 289 aa4.04□□□□□ -1.76
SOX2-OT-218ENST00000498731 FAM222AQ5U5X8 452 aa4.04□□□□□ -1.76
SOX2-OT-218ENST00000498731 PSPHP1O15172 72 aa4.03□□□□□ -1.76
SOX2-OT-218ENST00000498731 KLKP1Q107X0 134 aa4.03□□□□□ -1.76
SOX2-OT-218ENST00000498731 C4orf3Q8WVX3 66 aa4.03□□□□□ -1.76
SOX2-OT-218ENST00000498731 FBN3Q75N90 2809 aa4.03□□□□□ -1.76
SOX2-OT-218ENST00000498731 RNASE1P07998 156 aaKnown RBP4.03□□□□□ -1.76
SOX2-OT-218ENST00000498731 KRTAP1-1Q07627 177 aa4.03□□□□□ -1.76
SOX2-OT-218ENST00000498731 LINC00467Q9BRT7 94 aa4.03□□□□□ -1.76
SOX2-OT-218ENST00000498731 DEFB114Q30KQ6 69 aa4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 PLAC8L1A1L4L8 177 aa4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 MED14OSP0DP75 135 aa4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 PRR3P79522 188 aaKnown RBP4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 KRTAP24-1Q3LI83 254 aa4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 FAM19A3Q7Z5A8 133 aa4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 MAP6D1Q9H9H5 199 aa4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 TRGV1A0A0A0MS02 117 aa4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 NDUFA1O15239 70 aa4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 RPL36AP83881 106 aaKnown RBP4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 Q8N9L7 120 aa4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 RPL36ALQ969Q0 106 aaKnown RBP4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 C11orf68Q9H3H3 251 aaKnown RBP4.02□□□□□ -1.77
SOX2-OT-218ENST00000498731 Q6ZRP5 223 aa4.01□□□□□ -1.77
SOX2-OT-218ENST00000498731 LENEPQ9Y5L5 61 aa4.01□□□□□ -1.77
SOX2-OT-218ENST00000498731 CHCHD7Q9BUK0 85 aa4.01□□□□□ -1.77
SOX2-OT-218ENST00000498731 TRBV7-4A0A0J9YYF1 115 aa4□□□□□ -1.77
SOX2-OT-218ENST00000498731 TRBV6-5A0A0K0K1A5 114 aa4□□□□□ -1.77
SOX2-OT-218ENST00000498731 NBEAL2Q6ZNJ1 2754 aa4□□□□□ -1.77
SOX2-OT-218ENST00000498731 TRAV7A0A075B6U4 112 aa4□□□□□ -1.77
SOX2-OT-218ENST00000498731 A8MTW9 85 aa4□□□□□ -1.77
SOX2-OT-218ENST00000498731 NANOS2P60321 138 aaKnown RBP4□□□□□ -1.77
SOX2-OT-218ENST00000498731 KLK9Q2XQG4 91 aa4□□□□□ -1.77
SOX2-OT-218ENST00000498731 Q6ZVQ6 151 aa4□□□□□ -1.77
SOX2-OT-218ENST00000498731 C1orf158Q8N1D5 194 aa4□□□□□ -1.77
SOX2-OT-218ENST00000498731 ANK3Q12955 4377 aaKnown RBP4□□□□□ -1.77
SOX2-OT-218ENST00000498731 TRGV2A0A075B6R0 118 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 IGKV3OR2-268A0A0C4DH90 116 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 SMIM1B2RUZ4 78 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 K7EQD1 137 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 INSP01308 110 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 DAD1P61803 113 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 Q6ZRU5 148 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 KLLNB2CW77 178 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 LINC00242Q5T6M2 205 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 Q6ZTC4 211 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 PRR15Q8IV56 129 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 TRAV13-2A0A0B4J235 113 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 DEFB4AO15263 64 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 DEFB130BP0DP73 79 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 DEFB130AP0DP74 79 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 MIFP14174 115 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 HAMPP81172 84 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 LCE2CQ5TA81 110 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 Q8N3U1 123 aa3.99□□□□□ -1.77
SOX2-OT-218ENST00000498731 LINC01547P58512 204 aaPredicted RBP3.98□□□□□ -1.77
SOX2-OT-218ENST00000498731 NOP10Q9NPE3 64 aaKnown RBP3.98□□□□□ -1.77
SOX2-OT-218ENST00000498731 HTN3P15516 51 aa3.98□□□□□ -1.77
SOX2-OT-218ENST00000498731 IBA57-AS1B1ANH7 110 aa3.98□□□□□ -1.77
SOX2-OT-218ENST00000498731 PPP1R17O96001 155 aa3.97□□□□□ -1.77
SOX2-OT-218ENST00000498731 PRR4Q16378 134 aa3.97□□□□□ -1.77
SOX2-OT-218ENST00000498731 HIGD2AQ9BW72 106 aa3.97□□□□□ -1.77
SOX2-OT-218ENST00000498731 IGLV5-39A0A0G2JS06 123 aa3.97□□□□□ -1.77
SOX2-OT-218ENST00000498731 SND1-IT1Q9HBX3 110 aa3.97□□□□□ -1.77
SOX2-OT-218ENST00000498731 LOC100131303A0A0U1RQF7 123 aa3.97□□□□□ -1.77
SOX2-OT-218ENST00000498731 CCL18P55774 89 aa3.97□□□□□ -1.77
SOX2-OT-218ENST00000498731 A0A096LPF7 62 aa3.96□□□□□ -1.78
SOX2-OT-218ENST00000498731 CRPP02741 224 aa3.96□□□□□ -1.78
SOX2-OT-218ENST00000498731 ESRGQ1W209 222 aa3.96□□□□□ -1.78
SOX2-OT-218ENST00000498731 REG3GQ6UW15 175 aa3.96□□□□□ -1.78
SOX2-OT-218ENST00000498731 ORMDL1Q9P0S3 153 aa3.96□□□□□ -1.78
SOX2-OT-218ENST00000498731 TRGV4A0A0C4DH28 118 aa3.96□□□□□ -1.78
SOX2-OT-218ENST00000498731 TMEM254Q8TBM7 123 aa3.96□□□□□ -1.78
SOX2-OT-218ENST00000498731 Q8NDZ9 215 aa3.96□□□□□ -1.78
SOX2-OT-218ENST00000498731 TRBV10-1A0A0K0K1A3 114 aa3.95□□□□□ -1.78
SOX2-OT-218ENST00000498731 KRTAP10-3P60369 221 aa3.95□□□□□ -1.78
SOX2-OT-218ENST00000498731 IGLV5-45A0A087WSX0 123 aa3.95□□□□□ -1.78
SOX2-OT-218ENST00000498731 LORP23490 312 aaPredicted RBP3.95□□□□□ -1.78
SOX2-OT-218ENST00000498731 TOMM7Q9P0U1 55 aa3.95□□□□□ -1.78
SOX2-OT-218ENST00000498731 LYRM9A8MSI8 78 aa3.94□□□□□ -1.78
SOX2-OT-218ENST00000498731 A8MUN3 132 aa3.94□□□□□ -1.78
SOX2-OT-218ENST00000498731 DEFB135Q30KP9 77 aa3.94□□□□□ -1.78
SOX2-OT-218ENST00000498731 BPY2O14599 106 aa3.94□□□□□ -1.78
SOX2-OT-218ENST00000498731 NREPQ16612 68 aa3.94□□□□□ -1.78
SOX2-OT-218ENST00000498731 LINC00612Q8N6U2 182 aa3.94□□□□□ -1.78
SOX2-OT-218ENST00000498731 C10orf25Q5T742 122 aa3.94□□□□□ -1.78
SOX2-OT-218ENST00000498731 MEGF8Q7Z7M0 2845 aa3.94□□□□□ -1.78
SOX2-OT-218ENST00000498731 TRAV22A0A0B4J277 110 aa3.93□□□□□ -1.78
SOX2-OT-218ENST00000498731 Q6ZQT0 140 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms