RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 M0R2T5 61 aa-0.3□□□□□ -2.46
PSPC1-205ENST00000497722 TNRC18O15417 2968 aaPredicted RBP-0.3□□□□□ -2.46
PSPC1-205ENST00000497722 KRTDAPP60985 99 aa-0.3□□□□□ -2.46
PSPC1-205ENST00000497722 CGREF1Q99674 301 aa-0.3□□□□□ -2.46
PSPC1-205ENST00000497722 VPS13BQ7Z7G8 4022 aa-0.3□□□□□ -2.46
PSPC1-205ENST00000497722 MYO18BQ8IUG5 2567 aa-0.3□□□□□ -2.46
PSPC1-205ENST00000497722 EDC4Q6P2E9 1401 aaKnown RBP-0.3□□□□□ -2.46
PSPC1-205ENST00000497722 MUC17Q685J3 4493 aa-0.3□□□□□ -2.46
PSPC1-205ENST00000497722 CUBNO60494 3623 aa-0.31□□□□□ -2.46
PSPC1-205ENST00000497722 hADV29S1A0JD25 119 aa-0.31□□□□□ -2.46
PSPC1-205ENST00000497722 SFTA2Q6UW10 78 aa-0.31□□□□□ -2.46
PSPC1-205ENST00000497722 GTF2H5Q6ZYL4 71 aa-0.31□□□□□ -2.46
PSPC1-205ENST00000497722 SPG11Q96JI7 2443 aa-0.31□□□□□ -2.46
PSPC1-205ENST00000497722 DNHD1Q96M86 4753 aa-0.31□□□□□ -2.46
PSPC1-205ENST00000497722 DNAH7Q8WXX0 4024 aa-0.31□□□□□ -2.46
PSPC1-205ENST00000497722 USP9XQ93008 2570 aaPredicted RBP-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 LRRC37AA6NMS7 1700 aa-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 CELSR3Q9NYQ7 3312 aa-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 COX8AP10176 69 aa-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 SNCAP37840 140 aa-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 DEFB135Q30KP9 77 aa-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 DEFB112Q30KQ8 113 aa-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 FDCSPQ8NFU4 85 aa-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 USMG5Q96IX5 58 aa-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 LYSTQ99698 3801 aa-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 DNAH9Q9NYC9 4486 aa-0.32□□□□□ -2.46
PSPC1-205ENST00000497722 REV3LO60673 3130 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 TACC2O95359 2948 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 NKTRP30414 1462 aaKnown RBP-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 MLH3Q9UHC1 1453 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 ABCA13Q86UQ4 5058 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 NIPBLQ6KC79 2804 aaeCLIP-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 LAMA3Q16787 3333 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 C20orf202A1L168 122 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 H3BNG1 76 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 NDUFC1O43677 76 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 SEC11AP67812 179 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 SPRR2FQ96RM1 72 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 ANKRD36A6QL64 1941 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 KNDC1Q76NI1 1749 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 SLIT1O75093 1534 aa-0.33□□□□□ -2.46
PSPC1-205ENST00000497722 NBEAL2Q6ZNJ1 2754 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 PLECQ15149 4684 aaKnown RBP-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 ZZEF1O43149 2961 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 A0A087WVE0 104 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 H0YGG7 62 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 SYS1-DBNDD2H3BUS1 97 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 TRANK1O15050 2925 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 DEFB1P60022 68 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 DEFB105AQ8NG35 78 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 DNAH2Q9P225 4427 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 NBASA2RRP1 2371 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 RELNP78509 3460 aa-0.34□□□□□ -2.46
PSPC1-205ENST00000497722 MON2Q7Z3U7 1717 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 ADAMTS12P58397 1594 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 DNAH11Q96DT5 4516 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 TRBV25-1A0A075B6N4 114 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 H0YAA0 97 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 H7BZZ5 65 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 K7EP34 96 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 KRTAP19-6Q3LI70 58 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 C14orf144Q96I85 54 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 CACFD1Q9UGQ2 172 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 C5P01031 1676 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 ABCC2Q92887 1545 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 PTPN23Q9H3S7 1636 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 FYCO1Q9BQS8 1478 aa-0.35□□□□□ -2.47
PSPC1-205ENST00000497722 KNL1Q8NG31 2342 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 ANKRD11Q6UB99 2663 aaPredicted RBP-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 ANKRD50Q9ULJ7 1429 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 A0A1B0GU69 56 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 C7orf77A4D0Y5 90 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 MT1HL1P0DM35 61 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 S100PP25815 95 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 H1FX-AS1Q4G0G2 97 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 C6orf201Q7Z4U5 140 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 AKAP13Q12802 2813 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 ANK3Q12955 4377 aaKnown RBP-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 EYSQ5T1H1 3165 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 TEX15Q9BXT5 2789 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 TEX14Q8IWB6 1497 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 RAPGEF2Q9Y4G8 1499 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 LAMA1P25391 3075 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 COL12A1Q99715 3063 aa-0.36□□□□□ -2.47
PSPC1-205ENST00000497722 CMYA5Q8N3K9 4069 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.37□□□□□ -2.472e-23■■■■■ 173.4
PSPC1-205ENST00000497722 CUX1P39880 1505 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 WDR87Q6ZQQ6 2873 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 DYNC1H1Q14204 4646 aaKnown RBP-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 A0A0G2JND7 137 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 H0Y9P7 68 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 H3BQF6 201 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 MPC2O95563 127 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 DEFB110Q30KQ9 67 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 PSMG4Q5JS54 123 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 ANKRD36BQ8N2N9 1353 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 NRXN1Q9ULB1 1477 aa-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 PRRC2CQ9Y520 2896 aaKnown RBP-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 CLTCQ00610 1675 aaKnown RBP-0.37□□□□□ -2.47
PSPC1-205ENST00000497722 COL6A5A8TX70 2615 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms