RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 KRTAP10-3P60369 221 aa4.93□□□□□ -1.62
EPHA3-203ENST00000494014 TOMM7Q9P0U1 55 aa4.93□□□□□ -1.62
EPHA3-203ENST00000494014 H3BQ85 93 aa4.93□□□□□ -1.62
EPHA3-203ENST00000494014 PLAC8L1A1L4L8 177 aa4.93□□□□□ -1.62
EPHA3-203ENST00000494014 UBE2L6O14933 153 aa4.93□□□□□ -1.62
EPHA3-203ENST00000494014 HAMPP81172 84 aa4.93□□□□□ -1.62
EPHA3-203ENST00000494014 Q6ZVQ6 151 aa4.93□□□□□ -1.62
EPHA3-203ENST00000494014 PRKDCP78527 4128 aaKnown RBP4.92□□□□□ -1.62
EPHA3-203ENST00000494014 ZNF561-AS1K7EIQ3 104 aa4.92□□□□□ -1.62
EPHA3-203ENST00000494014 PRR15Q8IV56 129 aa4.92□□□□□ -1.62
EPHA3-203ENST00000494014 C1orf158Q8N1D5 194 aa4.92□□□□□ -1.62
EPHA3-203ENST00000494014 DYNLRB2Q8TF09 96 aa4.92□□□□□ -1.62
EPHA3-203ENST00000494014 ESRGQ1W209 222 aa4.92□□□□□ -1.62
EPHA3-203ENST00000494014 C6orf223Q8N319 242 aa4.92□□□□□ -1.62
EPHA3-203ENST00000494014 PMAIP1Q13794 54 aa4.91□□□□□ -1.62
EPHA3-203ENST00000494014 C6orf226Q5I0X4 101 aa4.91□□□□□ -1.62
EPHA3-203ENST00000494014 Q8N3U1 123 aa4.91□□□□□ -1.62
EPHA3-203ENST00000494014 C11orf44Q8N8P7 122 aa4.91□□□□□ -1.62
EPHA3-203ENST00000494014 TMEM254Q8TBM7 123 aa4.91□□□□□ -1.62
EPHA3-203ENST00000494014 C11orf68Q9H3H3 251 aaKnown RBP4.91□□□□□ -1.62
EPHA3-203ENST00000494014 NBEAL1Q6ZS30 2694 aa4.91□□□□□ -1.62
EPHA3-203ENST00000494014 NREPQ16612 68 aa4.91□□□□□ -1.62
EPHA3-203ENST00000494014 NTM-AS1Q6ZSK4 140 aa4.91□□□□□ -1.62
EPHA3-203ENST00000494014 Q6ZTI0 123 aa4.91□□□□□ -1.62
EPHA3-203ENST00000494014 C9orf66Q5T8R8 295 aa4.91□□□□□ -1.62
EPHA3-203ENST00000494014 A6NDX4 124 aa4.9□□□□□ -1.62
EPHA3-203ENST00000494014 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.62
EPHA3-203ENST00000494014 TM2D3Q9BRN9 247 aa4.9□□□□□ -1.62
EPHA3-203ENST00000494014 A0A087WZ39 114 aa4.9□□□□□ -1.63
EPHA3-203ENST00000494014 Q6ZRU5 148 aa4.9□□□□□ -1.63
EPHA3-203ENST00000494014 IGHV3OR16-9A0A0B4J2B5 98 aa4.89□□□□□ -1.63
EPHA3-203ENST00000494014 IGHV4-59P01825 116 aa4.89□□□□□ -1.63
EPHA3-203ENST00000494014 INSP01308 110 aa4.89□□□□□ -1.63
EPHA3-203ENST00000494014 FUSP35637 526 aaKnown RBP eCLIP4.89□□□□□ -1.63
EPHA3-203ENST00000494014 NANOS2P60321 138 aaKnown RBP4.89□□□□□ -1.63
EPHA3-203ENST00000494014 PRYO14603 147 aa4.88□□□□□ -1.63
EPHA3-203ENST00000494014 LY6EQ16553 131 aa4.88□□□□□ -1.63
EPHA3-203ENST00000494014 FAM229BQ4G0N7 80 aa4.88□□□□□ -1.63
EPHA3-203ENST00000494014 BRD3OSQ6XYD6 125 aa4.88□□□□□ -1.63
EPHA3-203ENST00000494014 DEFB131AP59861 70 aa4.88□□□□□ -1.63
EPHA3-203ENST00000494014 LINC00575Q6W349 94 aa4.88□□□□□ -1.63
EPHA3-203ENST00000494014 ZNF702PQ9H963 129 aa4.88□□□□□ -1.63
EPHA3-203ENST00000494014 H3BUX3 64 aa4.87□□□□□ -1.63
EPHA3-203ENST00000494014 BPY2O14599 106 aa4.87□□□□□ -1.63
EPHA3-203ENST00000494014 EGFEM1PQ0D2K5 195 aa4.87□□□□□ -1.63
EPHA3-203ENST00000494014 PRM2P04554 102 aa4.86□□□□□ -1.63
EPHA3-203ENST00000494014 Q8IZM0 81 aa4.86□□□□□ -1.63
EPHA3-203ENST00000494014 IL17DQ8TAD2 202 aa4.86□□□□□ -1.63
EPHA3-203ENST00000494014 Q6ZTC4 211 aa4.86□□□□□ -1.63
EPHA3-203ENST00000494014 TRGV1A0A0A0MS02 117 aa4.86□□□□□ -1.63
EPHA3-203ENST00000494014 CD164Q04900 197 aa4.86□□□□□ -1.63
EPHA3-203ENST00000494014 COX17Q14061 63 aa4.86□□□□□ -1.63
EPHA3-203ENST00000494014 C6orf99Q4VX62 202 aa4.86□□□□□ -1.63
EPHA3-203ENST00000494014 Q1T7F1 81 aa4.85□□□□□ -1.63
EPHA3-203ENST00000494014 SORL1Q92673 2214 aa4.85□□□□□ -1.63
EPHA3-203ENST00000494014 M0R2N4 97 aa4.85□□□□□ -1.63
EPHA3-203ENST00000494014 MUC7Q8TAX7 377 aa4.85□□□□□ -1.63
EPHA3-203ENST00000494014 PKD1L1Q8TDX9 2849 aa4.85□□□□□ -1.63
EPHA3-203ENST00000494014 IGKV3OR2-268A0A0C4DH90 116 aa4.84□□□□□ -1.63
EPHA3-203ENST00000494014 OCR1Q9BZK8 76 aa4.83□□□□□ -1.64
EPHA3-203ENST00000494014 DYNC2H1Q8NCM8 4307 aaKnown RBP4.83□□□□□ -1.64
EPHA3-203ENST00000494014 hDV103S1A0JD37 113 aa4.83□□□□□ -1.64
EPHA3-203ENST00000494014 DAD1P61803 113 aa4.83□□□□□ -1.64
EPHA3-203ENST00000494014 MAP6D1Q9H9H5 199 aa4.83□□□□□ -1.64
EPHA3-203ENST00000494014 DNAH9Q9NYC9 4486 aa4.82□□□□□ -1.64
EPHA3-203ENST00000494014 VWFP04275 2813 aa4.82□□□□□ -1.64
EPHA3-203ENST00000494014 IGLV4-60A0A075B6I1 120 aa4.82□□□□□ -1.64
EPHA3-203ENST00000494014 LINC00959A0A1B0GUT2 108 aa4.82□□□□□ -1.64
EPHA3-203ENST00000494014 TRBV6-8A0A0A6YYG3 113 aa4.81□□□□□ -1.64
EPHA3-203ENST00000494014 SCXQ7RTU7 201 aa4.81□□□□□ -1.64
EPHA3-203ENST00000494014 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-203ENST00000494014 Q6ZQY7 126 aa4.81□□□□□ -1.64
EPHA3-203ENST00000494014 MGAM2Q2M2H8 2515 aa4.81□□□□□ -1.64
EPHA3-203ENST00000494014 COX7BP24311 80 aa4.81□□□□□ -1.64
EPHA3-203ENST00000494014 PRR3P79522 188 aaKnown RBP4.81□□□□□ -1.64
EPHA3-203ENST00000494014 UBE2E2Q96LR5 201 aa4.81□□□□□ -1.64
EPHA3-203ENST00000494014 DEFB114Q30KQ6 69 aa4.8□□□□□ -1.64
EPHA3-203ENST00000494014 CD164L2Q6UWJ8 174 aa4.8□□□□□ -1.64
EPHA3-203ENST00000494014 B9D2Q9BPU9 175 aa4.8□□□□□ -1.64
EPHA3-203ENST00000494014 IGHV4-28A0A0C4DH34 117 aa4.8□□□□□ -1.64
EPHA3-203ENST00000494014 IGKV4-1P06312 121 aa4.8□□□□□ -1.64
EPHA3-203ENST00000494014 LYRM9A8MSI8 78 aa4.79□□□□□ -1.64
EPHA3-203ENST00000494014 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
EPHA3-203ENST00000494014 Q6ZRP5 223 aa4.79□□□□□ -1.64
EPHA3-203ENST00000494014 HIGD2AQ9BW72 106 aa4.79□□□□□ -1.64
EPHA3-203ENST00000494014 CCL24O00175 119 aa4.78□□□□□ -1.64
EPHA3-203ENST00000494014 C10orf99Q6UWK7 81 aa4.78□□□□□ -1.64
EPHA3-203ENST00000494014 LCE6AA0A183 80 aa4.78□□□□□ -1.64
EPHA3-203ENST00000494014 IGLV6-57P01721 117 aa4.78□□□□□ -1.64
EPHA3-203ENST00000494014 STHQ8IWL8 128 aa4.78□□□□□ -1.64
EPHA3-203ENST00000494014 TRGV4A0A0C4DH28 118 aa4.77□□□□□ -1.65
EPHA3-203ENST00000494014 A0A1B0GUV1 79 aa4.77□□□□□ -1.65
EPHA3-203ENST00000494014 K7EIL1 84 aa4.77□□□□□ -1.65
EPHA3-203ENST00000494014 KIAA0087Q14695 138 aa4.77□□□□□ -1.65
EPHA3-203ENST00000494014 MRPL55Q7Z7F7 128 aaKnown RBP4.77□□□□□ -1.65
EPHA3-203ENST00000494014 TRGV2A0A075B6R0 118 aa4.77□□□□□ -1.65
EPHA3-203ENST00000494014 LOC100131303A0A0U1RQF7 123 aa4.77□□□□□ -1.65
EPHA3-203ENST00000494014 C1orf64Q8NEQ6 169 aa4.77□□□□□ -1.65
EPHA3-203ENST00000494014 DIRC1Q969H9 104 aa4.77□□□□□ -1.65
EPHA3-203ENST00000494014 C16orf74Q96GX8 76 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms