RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 A0A0G2JMZ2 1700 aa1.12□□□□□ -2.23
VPS36-205ENST00000492650 PKD1L3Q7Z443 1732 aa1.12□□□□□ -2.23
VPS36-205ENST00000492650 ZNF831Q5JPB2 1677 aa1.11□□□□□ -2.23
VPS36-205ENST00000492650 LCE6AA0A183 80 aa1.11□□□□□ -2.23
VPS36-205ENST00000492650 ATXN8Q156A1 80 aa1.11□□□□□ -2.23
VPS36-205ENST00000492650 NREPQ16612 68 aa1.11□□□□□ -2.23
VPS36-205ENST00000492650 KRTAP21-3Q3LHN1 58 aa1.11□□□□□ -2.23
VPS36-205ENST00000492650 GNG13Q9P2W3 67 aa1.11□□□□□ -2.23
VPS36-205ENST00000492650 COL6A6A6NMZ7 2263 aa1.11□□□□□ -2.23
VPS36-205ENST00000492650 TIAM1Q13009 1591 aa1.11□□□□□ -2.23
VPS36-205ENST00000492650 KIAA0556O60303 1618 aa1.11□□□□□ -2.23
VPS36-205ENST00000492650 FAM208BQ5VWN6 2430 aa1.1□□□□□ -2.23
VPS36-205ENST00000492650 LMTK2Q8IWU2 1503 aa1.1□□□□□ -2.23
VPS36-205ENST00000492650 EEA1Q15075 1411 aa1.1□□□□□ -2.23
VPS36-205ENST00000492650 COX7BP24311 80 aa1.1□□□□□ -2.23
VPS36-205ENST00000492650 SPINK9Q5DT21 86 aa1.1□□□□□ -2.23
VPS36-205ENST00000492650 CCDC180Q9P1Z9 1646 aa1.1□□□□□ -2.23
VPS36-205ENST00000492650 DIP2AQ14689 1571 aa1.09□□□□□ -2.23
VPS36-205ENST00000492650 ROS1P08922 2347 aa1.09□□□□□ -2.23
VPS36-205ENST00000492650 LAMC1P11047 1609 aa1.09□□□□□ -2.23
VPS36-205ENST00000492650 PAPPAQ13219 1627 aa1.09□□□□□ -2.23
VPS36-205ENST00000492650 SMIM5Q71RC9 77 aa1.09□□□□□ -2.23
VPS36-205ENST00000492650 RALGAPBQ86X10 1494 aa1.09□□□□□ -2.24
VPS36-205ENST00000492650 PLXNB2O15031 1838 aa1.08□□□□□ -2.24
VPS36-205ENST00000492650 PREX2Q70Z35 1606 aa1.07□□□□□ -2.24
VPS36-205ENST00000492650 A0A0D9SFI3 127 aa1.07□□□□□ -2.24
VPS36-205ENST00000492650 I3L2K1 104 aa1.07□□□□□ -2.24
VPS36-205ENST00000492650 C10orf95Q9H7T3 257 aa1.07□□□□□ -2.24
VPS36-205ENST00000492650 CICQ96RK0 1608 aaPredicted RBP1.07□□□□□ -2.24
VPS36-205ENST00000492650 EIF2AK4Q9P2K8 1649 aaKnown RBP1.07□□□□□ -2.24
VPS36-205ENST00000492650 PLCH1Q4KWH8 1693 aa1.07□□□□□ -2.24
VPS36-205ENST00000492650 LRRC37AA6NMS7 1700 aa1.06□□□□□ -2.24
VPS36-205ENST00000492650 CNFNQ9BYD5 112 aa1.06□□□□□ -2.24
VPS36-205ENST00000492650 TP53AIP1Q9HCN2 124 aa1.06□□□□□ -2.24
VPS36-205ENST00000492650 NHSQ6T4R5 1651 aa1.06□□□□□ -2.24
VPS36-205ENST00000492650 URB1O60287 2271 aaKnown RBP1.05□□□□□ -2.24
VPS36-205ENST00000492650 PLXNC1O60486 1568 aa1.05□□□□□ -2.24
VPS36-205ENST00000492650 WIZO95785 1651 aa1.05□□□□□ -2.24
VPS36-205ENST00000492650 ARL14EPLP0DKL9 152 aa1.05□□□□□ -2.24
VPS36-205ENST00000492650 KRTAP10-4P60372 401 aaPredicted RBP1.05□□□□□ -2.24
VPS36-205ENST00000492650 RPL38P63173 70 aaKnown RBP1.05□□□□□ -2.24
VPS36-205ENST00000492650 PIGYQ3MUY2 71 aa1.05□□□□□ -2.24
VPS36-205ENST00000492650 DEFB123Q8N688 67 aa1.05□□□□□ -2.24
VPS36-205ENST00000492650 TIAM2Q8IVF5 1701 aa1.05□□□□□ -2.24
VPS36-205ENST00000492650 CFAP43Q8NDM7 1665 aa1.04□□□□□ -2.24
VPS36-205ENST00000492650 CACNA1EQ15878 2313 aa1.04□□□□□ -2.24
VPS36-205ENST00000492650 A0A0D9SG42 100 aa1.04□□□□□ -2.24
VPS36-205ENST00000492650 SPTY2D1-AS1A0A0U1RR47 76 aa1.04□□□□□ -2.24
VPS36-205ENST00000492650 CPSF4LA6NMK7 179 aaKnown RBP1.04□□□□□ -2.24
VPS36-205ENST00000492650 POLR1AO95602 1720 aaPredicted RBP1.03□□□□□ -2.24
VPS36-205ENST00000492650 PARP4Q9UKK3 1724 aaKnown RBP1.03□□□□□ -2.24
VPS36-205ENST00000492650 BCORQ6W2J9 1755 aa1.03□□□□□ -2.24
VPS36-205ENST00000492650 LINC01549A6NIU2 74 aa1.03□□□□□ -2.24
VPS36-205ENST00000492650 NDUFA4O00483 81 aa1.03□□□□□ -2.24
VPS36-205ENST00000492650 ENHOQ6UWT2 76 aa1.03□□□□□ -2.24
VPS36-205ENST00000492650 UBR3Q6ZT12 1888 aa1.03□□□□□ -2.25
VPS36-205ENST00000492650 K7EQZ3 153 aa1.02□□□□□ -2.25
VPS36-205ENST00000492650 QSER1Q2KHR3 1735 aa1.02□□□□□ -2.25
VPS36-205ENST00000492650 ABCA6Q8N139 1617 aa1.02□□□□□ -2.25
VPS36-205ENST00000492650 DOT1LQ8TEK3 1739 aa1.02□□□□□ -2.25
VPS36-205ENST00000492650 ABCA10Q8WWZ4 1543 aa1.02□□□□□ -2.25
VPS36-205ENST00000492650 USMG5Q96IX5 58 aa1.02□□□□□ -2.25
VPS36-205ENST00000492650 FAM103A1Q9BTL3 118 aaKnown RBP1.02□□□□□ -2.25
VPS36-205ENST00000492650 FMN2Q9NZ56 1722 aa1.02□□□□□ -2.25
VPS36-205ENST00000492650 CRIPTQ9P021 101 aa1.02□□□□□ -2.25
VPS36-205ENST00000492650 PRXQ9BXM0 1461 aa1.01□□□□□ -2.25
VPS36-205ENST00000492650 UBL5Q9BZL1 73 aa1.01□□□□□ -2.25
VPS36-205ENST00000492650 PREX1Q8TCU6 1659 aa1□□□□□ -2.25
VPS36-205ENST00000492650 COX6A2Q02221 97 aa1□□□□□ -2.25
VPS36-205ENST00000492650 PRO0255Q9UI72 69 aa1□□□□□ -2.25
VPS36-205ENST00000492650 COL14A1Q05707 1796 aaKnown RBP1□□□□□ -2.25
VPS36-205ENST00000492650 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1□□□□□ -2.259e-11■■■■■ 50.6
VPS36-205ENST00000492650 RICTORQ6R327 1708 aa1□□□□□ -2.25
VPS36-205ENST00000492650 GLI2P10070 1586 aa1□□□□□ -2.25
VPS36-205ENST00000492650 MAST1Q9Y2H9 1570 aa1□□□□□ -2.25
VPS36-205ENST00000492650 ABCC6O95255 1503 aa0.99□□□□□ -2.25
VPS36-205ENST00000492650 I3L3M4 83 aa0.99□□□□□ -2.25
VPS36-205ENST00000492650 Q8IZM0 81 aa0.99□□□□□ -2.25
VPS36-205ENST00000492650 ALS2Q96Q42 1657 aa0.99□□□□□ -2.25
VPS36-205ENST00000492650 CACNA1HO95180 2353 aa0.99□□□□□ -2.25
VPS36-205ENST00000492650 DOPEY2Q9Y3R5 2298 aa0.99□□□□□ -2.25
VPS36-205ENST00000492650 TNCP24821 2201 aa0.99□□□□□ -2.25
VPS36-205ENST00000492650 ZNF462Q96JM2 2506 aa0.98□□□□□ -2.25
VPS36-205ENST00000492650 ASH1LQ9NR48 2969 aaKnown RBP0.98□□□□□ -2.25
VPS36-205ENST00000492650 HELZ2Q9BYK8 2649 aaKnown RBP0.98□□□□□ -2.25
VPS36-205ENST00000492650 KCNQ1DNQ9H478 68 aa0.98□□□□□ -2.25
VPS36-205ENST00000492650 NWD1Q149M9 1564 aa0.98□□□□□ -2.25
VPS36-205ENST00000492650 SPTBN2O15020 2390 aa0.98□□□□□ -2.25
VPS36-205ENST00000492650 C2CD3Q4AC94 2353 aa0.98□□□□□ -2.25
VPS36-205ENST00000492650 PLCE1Q9P212 2302 aa0.98□□□□□ -2.25
VPS36-205ENST00000492650 KIF1AQ12756 1690 aa0.97□□□□□ -2.25
VPS36-205ENST00000492650 MRPL34Q9BQ48 92 aaKnown RBP0.97□□□□□ -2.25
VPS36-205ENST00000492650 CPS1P31327 1500 aa0.97□□□□□ -2.25
VPS36-205ENST00000492650 NRAPQ86VF7 1730 aa0.97□□□□□ -2.25
VPS36-205ENST00000492650 CNOT1A5YKK6 2376 aaKnown RBP0.97□□□□□ -2.25
VPS36-205ENST00000492650 RNF17Q9BXT8 1623 aaKnown RBP0.97□□□□□ -2.25
VPS36-205ENST00000492650 PRB3Q04118 309 aaPredicted RBP0.96□□□□□ -2.26
VPS36-205ENST00000492650 DEFB114Q30KQ6 69 aa0.96□□□□□ -2.26
VPS36-205ENST00000492650 NESP48681 1621 aa0.96□□□□□ -2.26
VPS36-205ENST00000492650 CCL22O00626 93 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms