RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 SMCO4Q9NRQ5 59 aa0.34□□□□□ -2.36
COMMD6-211ENST00000486516 PIK3C2BO00750 1634 aa0.34□□□□□ -2.36
COMMD6-211ENST00000486516 NKTRP30414 1462 aaKnown RBP0.34□□□□□ -2.36
COMMD6-211ENST00000486516 URB2Q14146 1524 aaKnown RBP0.33□□□□□ -2.36
COMMD6-211ENST00000486516 FRAS1Q86XX4 4008 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 FMN2Q9NZ56 1722 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 GOLGA4Q13439 2230 aaKnown RBP0.33□□□□□ -2.36
COMMD6-211ENST00000486516 DNMBPQ6XZF7 1577 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 POLQO75417 2590 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 COX6B1P14854 86 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 HMGA1P17096 107 aaKnown RBP0.33□□□□□ -2.36
COMMD6-211ENST00000486516 SPRR1BP22528 89 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 SPRR1AP35321 89 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 Q5BKY6 102 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 Q5VSD8 79 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 WFDC9Q8NEX5 89 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 USMG5Q96IX5 58 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 SMR3AQ99954 134 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 IQGAP3Q86VI3 1631 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 CD163L1Q9NR16 1453 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 UGGT2Q9NYU1 1516 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 BDP1A6H8Y1 2624 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 MYO5CQ9NQX4 1742 aa0.33□□□□□ -2.36
COMMD6-211ENST00000486516 RGPD8O14715 1765 aaPredicted RBP0.32□□□□□ -2.36
COMMD6-211ENST00000486516 RGPD5Q99666 1765 aa0.32□□□□□ -2.36
COMMD6-211ENST00000486516 NOTCH1P46531 2555 aa0.32□□□□□ -2.36
COMMD6-211ENST00000486516 KIF20BQ96Q89 1820 aa0.32□□□□□ -2.36
COMMD6-211ENST00000486516 IFI27P40305 119 aaPredicted RBP0.32□□□□□ -2.36
COMMD6-211ENST00000486516 DEFA5Q01523 94 aa0.32□□□□□ -2.36
COMMD6-211ENST00000486516 ATP5EP2Q5VTU8 51 aa0.32□□□□□ -2.36
COMMD6-211ENST00000486516 SPINK6Q6UWN8 80 aa0.32□□□□□ -2.36
COMMD6-211ENST00000486516 POLR1AO95602 1720 aaPredicted RBP0.32□□□□□ -2.36
COMMD6-211ENST00000486516 QSER1Q2KHR3 1735 aa0.32□□□□□ -2.36
COMMD6-211ENST00000486516 DOT1LQ8TEK3 1739 aa0.32□□□□□ -2.36
COMMD6-211ENST00000486516 MAGI3Q5TCQ9 1506 aa0.32□□□□□ -2.36
COMMD6-211ENST00000486516 C2CD3Q4AC94 2353 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 CCDC141Q6ZP82 1450 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 A0A087WXM4 84 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 SPTY2D1-AS1A0A0U1RR47 76 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 LCE6AA0A183 80 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 CPSF4LA6NMK7 179 aaKnown RBP0.31□□□□□ -2.36
COMMD6-211ENST00000486516 UMAD1C9J7I0 102 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 I3L3M4 83 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 PDCD5O14737 125 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 NDUFB1O75438 58 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 MRPL34Q9BQ48 92 aaKnown RBP0.31□□□□□ -2.36
COMMD6-211ENST00000486516 USF3Q68DE3 2245 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 SCN11AQ9UI33 1791 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 PLCE1Q9P212 2302 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 CELSR2Q9HCU4 2923 aa0.31□□□□□ -2.36
COMMD6-211ENST00000486516 URB1O60287 2271 aaKnown RBP0.3□□□□□ -2.36
COMMD6-211ENST00000486516 APCP25054 2843 aa0.3□□□□□ -2.36
COMMD6-211ENST00000486516 ABCA12Q86UK0 2595 aa0.3□□□□□ -2.36
COMMD6-211ENST00000486516 NREPQ16612 68 aa0.3□□□□□ -2.36
COMMD6-211ENST00000486516 LELP1Q5T871 98 aa0.3□□□□□ -2.36
COMMD6-211ENST00000486516 HEPN1Q6WQI6 88 aa0.3□□□□□ -2.36
COMMD6-211ENST00000486516 UBR3Q6ZT12 1888 aa0.3□□□□□ -2.36
COMMD6-211ENST00000486516 TNCP24821 2201 aa0.3□□□□□ -2.36
COMMD6-211ENST00000486516 ARFGEF2Q9Y6D5 1785 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 PIEZO2Q9H5I5 2752 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 PIEZO1Q92508 2521 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 ADAMTS12P58397 1594 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 CACNA1EQ15878 2313 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 COX8AP10176 69 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 KLK9Q2XQG4 91 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 DEFB105AQ8NG35 78 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 APLNQ9ULZ1 77 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 SPTBN2O15020 2390 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 TSC2P49815 1807 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 ZNF292O60281 2723 aa0.29□□□□□ -2.36
COMMD6-211ENST00000486516 F8P00451 2351 aa0.28□□□□□ -2.36
COMMD6-211ENST00000486516 DUOX2Q9NRD8 1548 aa0.28□□□□□ -2.36
COMMD6-211ENST00000486516 SYNE1Q8NF91 8797 aaKnown RBP0.28□□□□□ -2.36
COMMD6-211ENST00000486516 ANK2Q01484 3957 aa0.28□□□□□ -2.36
COMMD6-211ENST00000486516 COL14A1Q05707 1796 aaKnown RBP0.28□□□□□ -2.36
COMMD6-211ENST00000486516 H1FX-AS1Q4G0G2 97 aa0.28□□□□□ -2.36
COMMD6-211ENST00000486516 HILPDAQ9Y5L2 63 aa0.28□□□□□ -2.36
COMMD6-211ENST00000486516 TPRP12270 2363 aaKnown RBP0.28□□□□□ -2.36
COMMD6-211ENST00000486516 CLIP1P30622 1438 aa0.28□□□□□ -2.37
COMMD6-211ENST00000486516 DIP2AQ14689 1571 aa0.28□□□□□ -2.37
COMMD6-211ENST00000486516 MADDQ8WXG6 1647 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 DOPEY2Q9Y3R5 2298 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 ZC3H13Q5T200 1668 aaKnown RBP0.27□□□□□ -2.37
COMMD6-211ENST00000486516 PREX1Q8TCU6 1659 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 H3BVH4 76 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 NDUFA4O00483 81 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 DEFB109BQ30KR1 87 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 MUC5ACP98088 5654 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 PTPRZ1P23471 2315 aaPredicted RBP0.27□□□□□ -2.37
COMMD6-211ENST00000486516 ASXL1Q8IXJ9 1541 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 NWD1Q149M9 1564 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 CDC42BPGQ6DT37 1551 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 CSMD3Q7Z407 3707 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 CFAP43Q8NDM7 1665 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 ITSN1Q15811 1721 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 TIAM2Q8IVF5 1701 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 BCORQ6W2J9 1755 aa0.27□□□□□ -2.37
COMMD6-211ENST00000486516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.26□□□□□ -2.372e-6■■□□□ 13.9
COMMD6-211ENST00000486516 PTPRQQ9UMZ3 2332 aa0.26□□□□□ -2.37
COMMD6-211ENST00000486516 CHD9Q3L8U1 2897 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms