RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 KRTAP10-4P60372 401 aaPredicted RBP2.51□□□□□ -2.01
RBM39-233ENST00000482563 BCORQ6W2J9 1755 aa2.51□□□□□ -2.01
RBM39-233ENST00000482563 LMTK2Q8IWU2 1503 aa2.51□□□□□ -2.01
RBM39-233ENST00000482563 NREPQ16612 68 aa2.51□□□□□ -2.01
RBM39-233ENST00000482563 DOT1LQ8TEK3 1739 aa2.5□□□□□ -2.01
RBM39-233ENST00000482563 LCE6AA0A183 80 aa2.49□□□□□ -2.01
RBM39-233ENST00000482563 CICQ96RK0 1608 aaPredicted RBP2.49□□□□□ -2.01
RBM39-233ENST00000482563 CFAP43Q8NDM7 1665 aa2.49□□□□□ -2.01
RBM39-233ENST00000482563 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
RBM39-233ENST00000482563 COL14A1Q05707 1796 aaKnown RBP2.48□□□□□ -2.01
RBM39-233ENST00000482563 FAM208BQ5VWN6 2430 aa2.48□□□□□ -2.01
RBM39-233ENST00000482563 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
RBM39-233ENST00000482563 FMN2Q9NZ56 1722 aa2.47□□□□□ -2.01
RBM39-233ENST00000482563 TIAM1Q13009 1591 aa2.47□□□□□ -2.01
RBM39-233ENST00000482563 EIF2AK4Q9P2K8 1649 aaKnown RBP2.46□□□□□ -2.01
RBM39-233ENST00000482563 GOLGA4Q13439 2230 aaKnown RBP2.46□□□□□ -2.02
RBM39-233ENST00000482563 NOTCH2Q04721 2471 aa2.46□□□□□ -2.02
RBM39-233ENST00000482563 I3L2K1 104 aa2.45□□□□□ -2.02
RBM39-233ENST00000482563 COX7BP24311 80 aa2.45□□□□□ -2.02
RBM39-233ENST00000482563 SPINK9Q5DT21 86 aa2.45□□□□□ -2.02
RBM39-233ENST00000482563 PREX2Q70Z35 1606 aa2.45□□□□□ -2.02
RBM39-233ENST00000482563 GNG13Q9P2W3 67 aa2.45□□□□□ -2.02
RBM39-233ENST00000482563 ANKRD50Q9ULJ7 1429 aa2.44□□□□□ -2.02
RBM39-233ENST00000482563 ATXN8Q156A1 80 aa2.44□□□□□ -2.02
RBM39-233ENST00000482563 NHSQ6T4R5 1651 aa2.44□□□□□ -2.02
RBM39-233ENST00000482563 A0A0D9SG42 100 aa2.43□□□□□ -2.02
RBM39-233ENST00000482563 QSER1Q2KHR3 1735 aa2.43□□□□□ -2.02
RBM39-233ENST00000482563 PREX1Q8TCU6 1659 aa2.42□□□□□ -2.02
RBM39-233ENST00000482563 LRRC37AA6NMS7 1700 aa2.42□□□□□ -2.02
RBM39-233ENST00000482563 GLI2P10070 1586 aa2.41□□□□□ -2.02
RBM39-233ENST00000482563 RICTORQ6R327 1708 aa2.41□□□□□ -2.02
RBM39-233ENST00000482563 RALGAPBQ86X10 1494 aa2.4□□□□□ -2.02
RBM39-233ENST00000482563 URB1O60287 2271 aaKnown RBP2.4□□□□□ -2.03
RBM39-233ENST00000482563 ABCA6Q8N139 1617 aa2.4□□□□□ -2.03
RBM39-233ENST00000482563 TP53AIP1Q9HCN2 124 aa2.39□□□□□ -2.03
RBM39-233ENST00000482563 CRIPTQ9P021 101 aa2.39□□□□□ -2.03
RBM39-233ENST00000482563 HELZ2Q9BYK8 2649 aaKnown RBP2.39□□□□□ -2.03
RBM39-233ENST00000482563 PLXNC1O60486 1568 aa2.38□□□□□ -2.03
RBM39-233ENST00000482563 KRTAP21-3Q3LHN1 58 aa2.37□□□□□ -2.03
RBM39-233ENST00000482563 KIF1AQ12756 1690 aa2.37□□□□□ -2.03
RBM39-233ENST00000482563 NRAPQ86VF7 1730 aa2.37□□□□□ -2.03
RBM39-233ENST00000482563 NESP48681 1621 aa2.36□□□□□ -2.03
RBM39-233ENST00000482563 A0A0D9SFI3 127 aa2.36□□□□□ -2.03
RBM39-233ENST00000482563 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
RBM39-233ENST00000482563 OTOGLQ3ZCN5 2332 aa2.35□□□□□ -2.03
RBM39-233ENST00000482563 DEFB123Q8N688 67 aa2.34□□□□□ -2.03
RBM39-233ENST00000482563 ZNF462Q96JM2 2506 aa2.34□□□□□ -2.03
RBM39-233ENST00000482563 FAM103A1Q9BTL3 118 aaKnown RBP2.34□□□□□ -2.04
RBM39-233ENST00000482563 PIEZO2Q9H5I5 2752 aa2.33□□□□□ -2.04
RBM39-233ENST00000482563 ENHOQ6UWT2 76 aa2.32□□□□□ -2.04
RBM39-233ENST00000482563 CPSF4LA6NMK7 179 aaKnown RBP2.31□□□□□ -2.04
RBM39-233ENST00000482563 TSC2P49815 1807 aa2.31□□□□□ -2.04
RBM39-233ENST00000482563 EEA1Q15075 1411 aa2.31□□□□□ -2.04
RBM39-233ENST00000482563 LINC01549A6NIU2 74 aa2.31□□□□□ -2.04
RBM39-233ENST00000482563 K7EQZ3 153 aa2.31□□□□□ -2.04
RBM39-233ENST00000482563 NDUFA4O00483 81 aa2.31□□□□□ -2.04
RBM39-233ENST00000482563 CNFNQ9BYD5 112 aa2.31□□□□□ -2.04
RBM39-233ENST00000482563 SPTY2D1-AS1A0A0U1RR47 76 aa2.3□□□□□ -2.04
RBM39-233ENST00000482563 SMIM5Q71RC9 77 aa2.29□□□□□ -2.04
RBM39-233ENST00000482563 ALS2Q96Q42 1657 aa2.29□□□□□ -2.04
RBM39-233ENST00000482563 CACNA1EQ15878 2313 aa2.28□□□□□ -2.04
RBM39-233ENST00000482563 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.27□□□□□ -2.051e-8■■■■□ 21.9
RBM39-233ENST00000482563 PRB3Q04118 309 aaPredicted RBP2.27□□□□□ -2.05
RBM39-233ENST00000482563 PIGYQ3MUY2 71 aa2.27□□□□□ -2.05
RBM39-233ENST00000482563 NWD1Q149M9 1564 aa2.26□□□□□ -2.05
RBM39-233ENST00000482563 ABCA10Q8WWZ4 1543 aa2.26□□□□□ -2.05
RBM39-233ENST00000482563 PRXQ9BXM0 1461 aa2.26□□□□□ -2.05
RBM39-233ENST00000482563 PRO0255Q9UI72 69 aa2.26□□□□□ -2.05
RBM39-233ENST00000482563 MEGF8Q7Z7M0 2845 aa2.26□□□□□ -2.05
RBM39-233ENST00000482563 PLCE1Q9P212 2302 aa2.25□□□□□ -2.05
RBM39-233ENST00000482563 ITSN2Q9NZM3 1697 aa2.24□□□□□ -2.05
RBM39-233ENST00000482563 DOPEY2Q9Y3R5 2298 aa2.23□□□□□ -2.05
RBM39-233ENST00000482563 COX6A2Q02221 97 aa2.23□□□□□ -2.05
RBM39-233ENST00000482563 ABCC6O95255 1503 aa2.23□□□□□ -2.05
RBM39-233ENST00000482563 ARL14EPLP0DKL9 152 aa2.22□□□□□ -2.05
RBM39-233ENST00000482563 MUC6Q6W4X9 2439 aa2.21□□□□□ -2.06
RBM39-233ENST00000482563 CACNA1HO95180 2353 aa2.21□□□□□ -2.06
RBM39-233ENST00000482563 RPL38P63173 70 aaKnown RBP2.2□□□□□ -2.06
RBM39-233ENST00000482563 Q8IZM0 81 aa2.19□□□□□ -2.06
RBM39-233ENST00000482563 C2CD3Q4AC94 2353 aa2.18□□□□□ -2.06
RBM39-233ENST00000482563 TNCP24821 2201 aa2.18□□□□□ -2.06
RBM39-233ENST00000482563 USMG5Q96IX5 58 aa2.18□□□□□ -2.06
RBM39-233ENST00000482563 TJP1Q07157 1748 aa2.18□□□□□ -2.06
RBM39-233ENST00000482563 I3L3M4 83 aa2.17□□□□□ -2.06
RBM39-233ENST00000482563 MRPL34Q9BQ48 92 aaKnown RBP2.17□□□□□ -2.06
RBM39-233ENST00000482563 MAST1Q9Y2H9 1570 aa2.17□□□□□ -2.06
RBM39-233ENST00000482563 MROH2AA6NES4 1674 aa2.16□□□□□ -2.06
RBM39-233ENST00000482563 RNF17Q9BXT8 1623 aaKnown RBP2.15□□□□□ -2.07
RBM39-233ENST00000482563 UBL5Q9BZL1 73 aa2.15□□□□□ -2.07
RBM39-233ENST00000482563 CNOT1A5YKK6 2376 aaKnown RBP2.15□□□□□ -2.07
RBM39-233ENST00000482563 USF3Q68DE3 2245 aa2.14□□□□□ -2.07
RBM39-233ENST00000482563 KCNQ1DNQ9H478 68 aa2.14□□□□□ -2.07
RBM39-233ENST00000482563 CPS1P31327 1500 aa2.12□□□□□ -2.07
RBM39-233ENST00000482563 POLQO75417 2590 aa2.12□□□□□ -2.07
RBM39-233ENST00000482563 TNRC6CQ9HCJ0 1690 aaKnown RBP2.12□□□□□ -2.07
RBM39-233ENST00000482563 PTPRZ1P23471 2315 aaPredicted RBP2.11□□□□□ -2.07
RBM39-233ENST00000482563 LY75O60449 1722 aa2.11□□□□□ -2.07
RBM39-233ENST00000482563 DDX60LQ5H9U9 1706 aaKnown RBP2.11□□□□□ -2.07
RBM39-233ENST00000482563 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
RBM39-233ENST00000482563 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms