RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 A8MUN3 132 aa2.93□□□□□ -1.94
SSR1-207ENST00000479485 IGHV3-11P01762 117 aa2.93□□□□□ -1.94
SSR1-207ENST00000479485 KRTAP10-1P60331 282 aa2.93□□□□□ -1.94
SSR1-207ENST00000479485 Q6ZQY7 126 aa2.93□□□□□ -1.94
SSR1-207ENST00000479485 FDCSPQ8NFU4 85 aa2.93□□□□□ -1.94
SSR1-207ENST00000479485 LINC00208Q96KT6 92 aa2.93□□□□□ -1.94
SSR1-207ENST00000479485 B9D2Q9BPU9 175 aa2.93□□□□□ -1.94
SSR1-207ENST00000479485 CACNA1EQ15878 2313 aa2.93□□□□□ -1.94
SSR1-207ENST00000479485 MED13Q9UHV7 2174 aa2.93□□□□□ -1.94
SSR1-207ENST00000479485 ARHGAP32A7KAX9 2087 aa2.92□□□□□ -1.94
SSR1-207ENST00000479485 CENPFP49454 3210 aa2.92□□□□□ -1.94
SSR1-207ENST00000479485 A0A096LNT2 108 aa2.92□□□□□ -1.94
SSR1-207ENST00000479485 C16orf90A8MZG2 172 aa2.92□□□□□ -1.94
SSR1-207ENST00000479485 DEFB1P60022 68 aa2.92□□□□□ -1.94
SSR1-207ENST00000479485 PRB3Q04118 309 aaPredicted RBP2.92□□□□□ -1.94
SSR1-207ENST00000479485 CASC2Q6XLA1 102 aa2.92□□□□□ -1.94
SSR1-207ENST00000479485 PRR15LQ9BU68 103 aa2.92□□□□□ -1.94
SSR1-207ENST00000479485 POLEQ07864 2286 aa2.91□□□□□ -1.94
SSR1-207ENST00000479485 KIAA0100Q14667 2235 aaKnown RBP2.91□□□□□ -1.94
SSR1-207ENST00000479485 IGLV6-57P01721 117 aa2.91□□□□□ -1.94
SSR1-207ENST00000479485 PRM2P04554 102 aa2.91□□□□□ -1.94
SSR1-207ENST00000479485 HTN1P15515 57 aa2.91□□□□□ -1.94
SSR1-207ENST00000479485 KIAA0087Q14695 138 aa2.91□□□□□ -1.94
SSR1-207ENST00000479485 C9orf116Q5BN46 136 aaPredicted RBP2.91□□□□□ -1.94
SSR1-207ENST00000479485 CMC4P56277 68 aaPredicted RBP2.9□□□□□ -1.95
SSR1-207ENST00000479485 SCXQ7RTU7 201 aa2.9□□□□□ -1.95
SSR1-207ENST00000479485 TMEM105Q8N8V8 129 aa2.9□□□□□ -1.95
SSR1-207ENST00000479485 KCNQ1DNQ9H478 68 aa2.9□□□□□ -1.95
SSR1-207ENST00000479485 FAM186AA6NE01 2351 aa2.9□□□□□ -1.95
SSR1-207ENST00000479485 TRGV1A0A0A0MS02 117 aa2.89□□□□□ -1.95
SSR1-207ENST00000479485 LINC00959A0A1B0GUT2 108 aa2.89□□□□□ -1.95
SSR1-207ENST00000479485 LRCOL1A6NCL2 159 aa2.89□□□□□ -1.95
SSR1-207ENST00000479485 WFDC10AQ9H1F0 79 aa2.89□□□□□ -1.95
SSR1-207ENST00000479485 IGLV4-60A0A075B6I1 120 aa2.88□□□□□ -1.95
SSR1-207ENST00000479485 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.88□□□□□ -1.95
SSR1-207ENST00000479485 LYNX1G3V0Z9 82 aa2.88□□□□□ -1.95
SSR1-207ENST00000479485 C3orf84H3BNL1 204 aa2.88□□□□□ -1.95
SSR1-207ENST00000479485 LYNX1P0DP58 116 aa2.88□□□□□ -1.95
SSR1-207ENST00000479485 LINC01554Q52M75 96 aa2.88□□□□□ -1.95
SSR1-207ENST00000479485 CHCHD10Q8WYQ3 142 aaPredicted RBP2.88□□□□□ -1.95
SSR1-207ENST00000479485 CADP27708 2225 aa2.88□□□□□ -1.95
SSR1-207ENST00000479485 GVQW2A0A096LPI5 108 aaPredicted RBP2.87□□□□□ -1.95
SSR1-207ENST00000479485 TRGV4A0A0C4DH28 118 aa2.87□□□□□ -1.95
SSR1-207ENST00000479485 IGKV3OR2-268A0A0C4DH90 116 aa2.87□□□□□ -1.95
SSR1-207ENST00000479485 M0R2N4 97 aa2.87□□□□□ -1.95
SSR1-207ENST00000479485 DEFB131AP59861 70 aa2.87□□□□□ -1.95
SSR1-207ENST00000479485 DEFB109BQ30KR1 87 aa2.87□□□□□ -1.95
SSR1-207ENST00000479485 LINC01558Q9Y6Z2 57 aa2.87□□□□□ -1.95
SSR1-207ENST00000479485 IGLV5-48A0A075B6I7 105 aa2.86□□□□□ -1.95
SSR1-207ENST00000479485 A6NDX4 124 aa2.86□□□□□ -1.95
SSR1-207ENST00000479485 C19orf84I3L1E1 186 aa2.86□□□□□ -1.95
SSR1-207ENST00000479485 SPAG11BQ08648 103 aa2.86□□□□□ -1.95
SSR1-207ENST00000479485 FBXL19-AS1Q494R0 122 aa2.86□□□□□ -1.95
SSR1-207ENST00000479485 WNK2Q9Y3S1 2297 aa2.86□□□□□ -1.95
SSR1-207ENST00000479485 PLCE1Q9P212 2302 aa2.86□□□□□ -1.95
SSR1-207ENST00000479485 MOBPQ13875 183 aa2.85□□□□□ -1.95
SSR1-207ENST00000479485 KPRPQ5T749 579 aaPredicted RBP2.85□□□□□ -1.95
SSR1-207ENST00000479485 Q8N9L7 120 aa2.85□□□□□ -1.95
SSR1-207ENST00000479485 URB1O60287 2271 aaKnown RBP2.85□□□□□ -1.95
SSR1-207ENST00000479485 ABCA4P78363 2273 aa2.84□□□□□ -1.95
SSR1-207ENST00000479485 PRR3P79522 188 aaKnown RBP2.84□□□□□ -1.95
SSR1-207ENST00000479485 C11orf71Q6IPW1 123 aa2.84□□□□□ -1.95
SSR1-207ENST00000479485 SPRR4Q96PI1 79 aa2.84□□□□□ -1.95
SSR1-207ENST00000479485 UTRNP46939 3433 aa2.84□□□□□ -1.96
SSR1-207ENST00000479485 AHCTF1Q8WYP5 2266 aa2.84□□□□□ -1.96
SSR1-207ENST00000479485 CEP350Q5VT06 3117 aa2.84□□□□□ -1.96
SSR1-207ENST00000479485 CNBPP62633 177 aaKnown RBP2.83□□□□□ -1.96
SSR1-207ENST00000479485 COA5Q86WW8 74 aa2.83□□□□□ -1.96
SSR1-207ENST00000479485 RETNLBQ9BQ08 111 aa2.83□□□□□ -1.96
SSR1-207ENST00000479485 WDR87Q6ZQQ6 2873 aa2.83□□□□□ -1.96
SSR1-207ENST00000479485 ICE1Q9Y2F5 2266 aa2.82□□□□□ -1.96
SSR1-207ENST00000479485 H0Y9P7 68 aa2.82□□□□□ -1.96
SSR1-207ENST00000479485 H3BUX3 64 aa2.82□□□□□ -1.96
SSR1-207ENST00000479485 LINC00313P59037 77 aa2.82□□□□□ -1.96
SSR1-207ENST00000479485 C1orf137Q5JT78 98 aa2.82□□□□□ -1.96
SSR1-207ENST00000479485 PLAC8Q9NZF1 115 aa2.82□□□□□ -1.96
SSR1-207ENST00000479485 KLK12Q9UKR0 248 aa2.82□□□□□ -1.96
SSR1-207ENST00000479485 LY6EQ16553 131 aa2.81□□□□□ -1.96
SSR1-207ENST00000479485 CASC10Q5T4H9 136 aa2.81□□□□□ -1.96
SSR1-207ENST00000479485 TP53AIP1Q9HCN2 124 aa2.81□□□□□ -1.96
SSR1-207ENST00000479485 NOP10Q9NPE3 64 aaKnown RBP2.81□□□□□ -1.96
SSR1-207ENST00000479485 PTPRQQ9UMZ3 2332 aa2.8□□□□□ -1.96
SSR1-207ENST00000479485 IGKV2D-24A0A075B6R9 120 aa2.8□□□□□ -1.96
SSR1-207ENST00000479485 K7EQZ3 153 aa2.8□□□□□ -1.96
SSR1-207ENST00000479485 PRB1P04280 392 aa2.8□□□□□ -1.96
SSR1-207ENST00000479485 REG3AQ06141 175 aa2.8□□□□□ -1.96
SSR1-207ENST00000479485 DEFB112Q30KQ8 113 aa2.8□□□□□ -1.96
SSR1-207ENST00000479485 C9orf163Q8N9P6 203 aa2.8□□□□□ -1.96
SSR1-207ENST00000479485 ST20-AS1Q8NBB2 130 aa2.8□□□□□ -1.96
SSR1-207ENST00000479485 C4orf3Q8WVX3 66 aa2.79□□□□□ -1.96
SSR1-207ENST00000479485 PRO0255Q9UI72 69 aa2.79□□□□□ -1.96
SSR1-207ENST00000479485 CACNA1BQ00975 2339 aa2.78□□□□□ -1.96
SSR1-207ENST00000479485 DEFB131BA0A096LNP1 70 aa2.78□□□□□ -1.96
SSR1-207ENST00000479485 A0A1W2PNM2 257 aa2.78□□□□□ -1.96
SSR1-207ENST00000479485 KRTAP4-16G5E9R7 235 aaPredicted RBP2.78□□□□□ -1.96
SSR1-207ENST00000479485 PRB2P02812 416 aaPredicted RBP2.78□□□□□ -1.96
SSR1-207ENST00000479485 ANGP03950 147 aaKnown RBP2.78□□□□□ -1.96
SSR1-207ENST00000479485 Q8NAQ8 132 aa2.78□□□□□ -1.96
SSR1-207ENST00000479485 DOPEY2Q9Y3R5 2298 aa2.78□□□□□ -1.96
SSR1-207ENST00000479485 HTTP42858 3142 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms