RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 DEFB112Q30KQ8 113 aa0.81□□□□□ -2.28
TM9SF3-204ENST00000475401 Q5VSD8 79 aa0.81□□□□□ -2.28
TM9SF3-204ENST00000475401 MAGI3Q5TCQ9 1506 aa0.8□□□□□ -2.28
TM9SF3-204ENST00000475401 POLR1AO95602 1720 aaPredicted RBP0.8□□□□□ -2.28
TM9SF3-204ENST00000475401 BDP1A6H8Y1 2624 aa0.79□□□□□ -2.28
TM9SF3-204ENST00000475401 USMG5Q96IX5 58 aa0.79□□□□□ -2.28
TM9SF3-204ENST00000475401 SMR3AQ99954 134 aa0.79□□□□□ -2.28
TM9SF3-204ENST00000475401 FMN2Q9NZ56 1722 aa0.78□□□□□ -2.28
TM9SF3-204ENST00000475401 TRAV21A0A0B4J279 112 aa0.78□□□□□ -2.28
TM9SF3-204ENST00000475401 COX6B1P14854 86 aa0.78□□□□□ -2.28
TM9SF3-204ENST00000475401 SPINK6Q6UWN8 80 aa0.78□□□□□ -2.28
TM9SF3-204ENST00000475401 C2CD3Q4AC94 2353 aa0.78□□□□□ -2.28
TM9SF3-204ENST00000475401 CD163L1Q9NR16 1453 aa0.78□□□□□ -2.28
TM9SF3-204ENST00000475401 CELSR2Q9HCU4 2923 aa0.78□□□□□ -2.29
TM9SF3-204ENST00000475401 PLCE1Q9P212 2302 aa0.77□□□□□ -2.29
TM9SF3-204ENST00000475401 ATP5EP2Q5VTU8 51 aa0.77□□□□□ -2.29
TM9SF3-204ENST00000475401 TNCP24821 2201 aa0.76□□□□□ -2.29
TM9SF3-204ENST00000475401 COL14A1Q05707 1796 aaKnown RBP0.76□□□□□ -2.29
TM9SF3-204ENST00000475401 NDUFB1O75438 58 aa0.76□□□□□ -2.29
TM9SF3-204ENST00000475401 COX7BP24311 80 aa0.76□□□□□ -2.29
TM9SF3-204ENST00000475401 ABCA12Q86UK0 2595 aa0.76□□□□□ -2.29
TM9SF3-204ENST00000475401 USF3Q68DE3 2245 aa0.76□□□□□ -2.29
TM9SF3-204ENST00000475401 UBR3Q6ZT12 1888 aa0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 MYO5CQ9NQX4 1742 aa0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 APCP25054 2843 aa0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 IQGAP3Q86VI3 1631 aa0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 FXYD6-FXYD2A0A087WZ82 144 aa0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 CFDP00746 253 aaPredicted RBP0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 SPRR1AP35321 89 aa0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 GAFA1Q96PS6 74 aa0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 CRIPTQ9P021 101 aa0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 DOT1LQ8TEK3 1739 aa0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 URB1O60287 2271 aaKnown RBP0.75□□□□□ -2.29
TM9SF3-204ENST00000475401 ARFGEF2Q9Y6D5 1785 aa0.74□□□□□ -2.29
TM9SF3-204ENST00000475401 PIEZO2Q9H5I5 2752 aa0.74□□□□□ -2.29
TM9SF3-204ENST00000475401 TSC2P49815 1807 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 TIAM2Q8IVF5 1701 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 SPTBN2O15020 2390 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 LCE6AA0A183 80 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 IFI6P09912 130 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 SMIM13P0DJ93 91 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 SPRR1BP22528 89 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 Q5BKY6 102 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 SMCO4Q9NRQ5 59 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 CACNA1EQ15878 2313 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 UGGT2Q9NYU1 1516 aa0.73□□□□□ -2.29
TM9SF3-204ENST00000475401 ANK2Q01484 3957 aa0.72□□□□□ -2.29
TM9SF3-204ENST00000475401 DNMBPQ6XZF7 1577 aa0.72□□□□□ -2.29
TM9SF3-204ENST00000475401 SPTY2D1-AS1A0A0U1RR47 76 aa0.72□□□□□ -2.29
TM9SF3-204ENST00000475401 COX8AP10176 69 aa0.72□□□□□ -2.29
TM9SF3-204ENST00000475401 HMGA1P17096 107 aaKnown RBP0.72□□□□□ -2.29
TM9SF3-204ENST00000475401 DOPEY2Q9Y3R5 2298 aa0.71□□□□□ -2.3
TM9SF3-204ENST00000475401 CPSF4LA6NMK7 179 aaKnown RBP0.71□□□□□ -2.3
TM9SF3-204ENST00000475401 I3L3M4 83 aa0.71□□□□□ -2.3
TM9SF3-204ENST00000475401 IFI27P40305 119 aaPredicted RBP0.71□□□□□ -2.3
TM9SF3-204ENST00000475401 F8P00451 2351 aa0.71□□□□□ -2.3
TM9SF3-204ENST00000475401 PTPRZ1P23471 2315 aaPredicted RBP0.7□□□□□ -2.3
TM9SF3-204ENST00000475401 PREX1Q8TCU6 1659 aa0.7□□□□□ -2.3
TM9SF3-204ENST00000475401 WFDC9Q8NEX5 89 aa0.7□□□□□ -2.3
TM9SF3-204ENST00000475401 MRPL34Q9BQ48 92 aaKnown RBP0.7□□□□□ -2.3
TM9SF3-204ENST00000475401 ZNF292O60281 2723 aa0.7□□□□□ -2.3
TM9SF3-204ENST00000475401 BCORQ6W2J9 1755 aa0.7□□□□□ -2.3
TM9SF3-204ENST00000475401 USP24Q9UPU5 2620 aa0.69□□□□□ -2.3
TM9SF3-204ENST00000475401 CFAP43Q8NDM7 1665 aa0.69□□□□□ -2.3
TM9SF3-204ENST00000475401 TPRP12270 2363 aaKnown RBP0.69□□□□□ -2.3
TM9SF3-204ENST00000475401 UMAD1C9J7I0 102 aa0.69□□□□□ -2.3
TM9SF3-204ENST00000475401 PDCD5O14737 125 aa0.69□□□□□ -2.3
TM9SF3-204ENST00000475401 PIEZO1Q92508 2521 aa0.68□□□□□ -2.3
TM9SF3-204ENST00000475401 CLIP1P30622 1438 aa0.68□□□□□ -2.3
TM9SF3-204ENST00000475401 CHD9Q3L8U1 2897 aa0.68□□□□□ -2.3
TM9SF3-204ENST00000475401 NWD1Q149M9 1564 aa0.66□□□□□ -2.3
TM9SF3-204ENST00000475401 PTPRQQ9UMZ3 2332 aa0.66□□□□□ -2.3
TM9SF3-204ENST00000475401 A0A087WXM4 84 aa0.66□□□□□ -2.3
TM9SF3-204ENST00000475401 EIF2AK4Q9P2K8 1649 aaKnown RBP0.66□□□□□ -2.3
TM9SF3-204ENST00000475401 CSMD3Q7Z407 3707 aa0.65□□□□□ -2.3
TM9SF3-204ENST00000475401 ANKRD50Q9ULJ7 1429 aa0.65□□□□□ -2.3
TM9SF3-204ENST00000475401 DUOX2Q9NRD8 1548 aa0.65□□□□□ -2.31
TM9SF3-204ENST00000475401 PARP4Q9UKK3 1724 aaKnown RBP0.65□□□□□ -2.31
TM9SF3-204ENST00000475401 DEFA5Q01523 94 aa0.65□□□□□ -2.31
TM9SF3-204ENST00000475401 NREPQ16612 68 aa0.65□□□□□ -2.31
TM9SF3-204ENST00000475401 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
TM9SF3-204ENST00000475401 DEFB105AQ8NG35 78 aa0.65□□□□□ -2.31
TM9SF3-204ENST00000475401 ADAMTS12P58397 1594 aa0.65□□□□□ -2.31
TM9SF3-204ENST00000475401 ZC3H13Q5T200 1668 aaKnown RBP0.65□□□□□ -2.31
TM9SF3-204ENST00000475401 CCL22O00626 93 aa0.64□□□□□ -2.31
TM9SF3-204ENST00000475401 RPL38P63173 70 aaKnown RBP0.64□□□□□ -2.31
TM9SF3-204ENST00000475401 DEFB109BQ30KR1 87 aa0.64□□□□□ -2.31
TM9SF3-204ENST00000475401 HEPN1Q6WQI6 88 aa0.64□□□□□ -2.31
TM9SF3-204ENST00000475401 ITSN1Q15811 1721 aa0.64□□□□□ -2.31
TM9SF3-204ENST00000475401 CICQ96RK0 1608 aaPredicted RBP0.64□□□□□ -2.31
TM9SF3-204ENST00000475401 AHNAK2Q8IVF2 5795 aa0.63□□□□□ -2.31
TM9SF3-204ENST00000475401 NESP48681 1621 aa0.63□□□□□ -2.31
TM9SF3-204ENST00000475401 SPINK1P00995 79 aa0.62□□□□□ -2.31
TM9SF3-204ENST00000475401 PLCH1Q4KWH8 1693 aa0.62□□□□□ -2.31
TM9SF3-204ENST00000475401 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.61□□□□□ -2.313e-8■■□□□ 11.5
TM9SF3-204ENST00000475401 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
TM9SF3-204ENST00000475401 H1FX-AS1Q4G0G2 97 aa0.61□□□□□ -2.31
TM9SF3-204ENST00000475401 COX6B2Q6YFQ2 88 aa0.61□□□□□ -2.31
TM9SF3-204ENST00000475401 APLNQ9ULZ1 77 aa0.61□□□□□ -2.31
TM9SF3-204ENST00000475401 TNRC6CQ9HCJ0 1690 aaKnown RBP0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms