RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 IGLV1-51P01701 117 aa12.55□□□□□ -0.4
SNAPC3-205ENST00000467062 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
SNAPC3-205ENST00000467062 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
SNAPC3-205ENST00000467062 TOMM7Q9P0U1 55 aa12.54□□□□□ -0.4
SNAPC3-205ENST00000467062 TRAV10A0A0B4J240 114 aa12.53□□□□□ -0.4
SNAPC3-205ENST00000467062 Q8N814 137 aa12.53□□□□□ -0.4
SNAPC3-205ENST00000467062 KRTAP10-3P60369 221 aa12.53□□□□□ -0.4
SNAPC3-205ENST00000467062 LINC01547P58512 204 aaPredicted RBP12.51□□□□□ -0.41
SNAPC3-205ENST00000467062 SPATA3Q8NHX4 192 aa12.51□□□□□ -0.41
SNAPC3-205ENST00000467062 DEFB130BP0DP73 79 aa12.51□□□□□ -0.41
SNAPC3-205ENST00000467062 DEFB130AP0DP74 79 aa12.51□□□□□ -0.41
SNAPC3-205ENST00000467062 CSNK1G2-AS1Q8NCQ2 148 aa12.51□□□□□ -0.41
SNAPC3-205ENST00000467062 TRGV4A0A0C4DH28 118 aa12.5□□□□□ -0.41
SNAPC3-205ENST00000467062 TRBV10-1A0A0K0K1A3 114 aa12.49□□□□□ -0.41
SNAPC3-205ENST00000467062 MIFP14174 115 aa12.49□□□□□ -0.41
SNAPC3-205ENST00000467062 J3QKU1 62 aa12.49□□□□□ -0.41
SNAPC3-205ENST00000467062 HAMPP81172 84 aa12.49□□□□□ -0.41
SNAPC3-205ENST00000467062 ATRQ13535 2644 aa12.49□□□□□ -0.41
SNAPC3-205ENST00000467062 UBE2L6O14933 153 aa12.48□□□□□ -0.41
SNAPC3-205ENST00000467062 C16orf74Q96GX8 76 aa12.48□□□□□ -0.41
SNAPC3-205ENST00000467062 KMT2BQ9UMN6 2715 aaPredicted RBP12.47□□□□□ -0.41
SNAPC3-205ENST00000467062 CXCL6P80162 114 aa12.47□□□□□ -0.41
SNAPC3-205ENST00000467062 Q6ZQT0 140 aa12.47□□□□□ -0.41
SNAPC3-205ENST00000467062 IGLV4-60A0A075B6I1 120 aa12.45□□□□□ -0.42
SNAPC3-205ENST00000467062 TRBV7-4A0A0J9YYF1 115 aa12.45□□□□□ -0.42
SNAPC3-205ENST00000467062 MPLKIPQ8TAP9 179 aa12.45□□□□□ -0.42
SNAPC3-205ENST00000467062 LOC110117498A0A087WWA1 95 aa12.45□□□□□ -0.42
SNAPC3-205ENST00000467062 Q6ZVQ6 151 aa12.44□□□□□ -0.42
SNAPC3-205ENST00000467062 A0A096LPF7 62 aa12.44□□□□□ -0.42
SNAPC3-205ENST00000467062 Q8N3U1 123 aa12.43□□□□□ -0.42
SNAPC3-205ENST00000467062 DEFB4AO15263 64 aa12.42□□□□□ -0.42
SNAPC3-205ENST00000467062 TM2D3Q9BRN9 247 aa12.42□□□□□ -0.42
SNAPC3-205ENST00000467062 NSD1Q96L73 2696 aaPredicted RBP12.42□□□□□ -0.42
SNAPC3-205ENST00000467062 ERC2-IT1O76042 136 aa12.4□□□□□ -0.42
SNAPC3-205ENST00000467062 CMC4P56277 68 aaPredicted RBP12.4□□□□□ -0.42
SNAPC3-205ENST00000467062 FAM229BQ4G0N7 80 aa12.4□□□□□ -0.42
SNAPC3-205ENST00000467062 TMEM254Q8TBM7 123 aa12.4□□□□□ -0.42
SNAPC3-205ENST00000467062 HIVEP1P15822 2718 aa12.39□□□□□ -0.43
SNAPC3-205ENST00000467062 ZNF561-AS1K7EIQ3 104 aa12.39□□□□□ -0.43
SNAPC3-205ENST00000467062 LAMTOR3Q9UHA4 124 aa12.39□□□□□ -0.43
SNAPC3-205ENST00000467062 NREPQ16612 68 aa12.39□□□□□ -0.43
SNAPC3-205ENST00000467062 TRBV6-8A0A0A6YYG3 113 aa12.38□□□□□ -0.43
SNAPC3-205ENST00000467062 PDE6GP18545 87 aa12.38□□□□□ -0.43
SNAPC3-205ENST00000467062 ESRGQ1W209 222 aa12.38□□□□□ -0.43
SNAPC3-205ENST00000467062 NANOS2P60321 138 aaKnown RBP12.38□□□□□ -0.43
SNAPC3-205ENST00000467062 PMAIP1Q13794 54 aa12.37□□□□□ -0.43
SNAPC3-205ENST00000467062 C6orf223Q8N319 242 aa12.37□□□□□ -0.43
SNAPC3-205ENST00000467062 CLPSL2Q6UWE3 100 aa12.37□□□□□ -0.43
SNAPC3-205ENST00000467062 IGHV3OR16-9A0A0B4J2B5 98 aa12.36□□□□□ -0.43
SNAPC3-205ENST00000467062 INAFM1C9JVW0 142 aa12.36□□□□□ -0.43
SNAPC3-205ENST00000467062 PRR15Q8IV56 129 aa12.36□□□□□ -0.43
SNAPC3-205ENST00000467062 C11orf68Q9H3H3 251 aaKnown RBP12.36□□□□□ -0.43
SNAPC3-205ENST00000467062 A0A087WZ39 114 aa12.36□□□□□ -0.43
SNAPC3-205ENST00000467062 GYPEP15421 78 aa12.35□□□□□ -0.43
SNAPC3-205ENST00000467062 C6orf226Q5I0X4 101 aa12.35□□□□□ -0.43
SNAPC3-205ENST00000467062 TEP1Q99973 2627 aaKnown RBP12.33□□□□□ -0.44
SNAPC3-205ENST00000467062 M0R2N4 97 aa12.33□□□□□ -0.44
SNAPC3-205ENST00000467062 FUSP35637 526 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNAPC3-205ENST00000467062 X6R8D5 127 aa12.32□□□□□ -0.44
SNAPC3-205ENST00000467062 DEFB135Q30KP9 77 aa12.32□□□□□ -0.44
SNAPC3-205ENST00000467062 C9orf66Q5T8R8 295 aa12.32□□□□□ -0.44
SNAPC3-205ENST00000467062 LINC00575Q6W349 94 aa12.32□□□□□ -0.44
SNAPC3-205ENST00000467062 BPY2O14599 106 aa12.31□□□□□ -0.44
SNAPC3-205ENST00000467062 PRYO14603 147 aa12.31□□□□□ -0.44
SNAPC3-205ENST00000467062 C6orf99Q4VX62 202 aa12.3□□□□□ -0.44
SNAPC3-205ENST00000467062 H3BQ85 93 aa12.29□□□□□ -0.44
SNAPC3-205ENST00000467062 PRR3P79522 188 aaKnown RBP12.29□□□□□ -0.44
SNAPC3-205ENST00000467062 Q6ZRU5 148 aa12.29□□□□□ -0.44
SNAPC3-205ENST00000467062 LINC00959A0A1B0GUT2 108 aa12.27□□□□□ -0.45
SNAPC3-205ENST00000467062 Q6ZTC4 211 aa12.26□□□□□ -0.45
SNAPC3-205ENST00000467062 SCXQ7RTU7 201 aa12.25□□□□□ -0.45
SNAPC3-205ENST00000467062 IGLV10-54A0A075B6I4 117 aa12.25□□□□□ -0.45
SNAPC3-205ENST00000467062 MUC7Q8TAX7 377 aa12.25□□□□□ -0.45
SNAPC3-205ENST00000467062 Q8IZM0 81 aa12.24□□□□□ -0.45
SNAPC3-205ENST00000467062 FLNBO75369 2602 aaKnown RBP12.24□□□□□ -0.45
SNAPC3-205ENST00000467062 PRO0255Q9UI72 69 aa12.23□□□□□ -0.45
SNAPC3-205ENST00000467062 PKD1L1Q8TDX9 2849 aa12.22□□□□□ -0.45
SNAPC3-205ENST00000467062 HTN3P15516 51 aa12.22□□□□□ -0.45
SNAPC3-205ENST00000467062 LINC00612Q8N6U2 182 aa12.22□□□□□ -0.45
SNAPC3-205ENST00000467062 COX17Q14061 63 aa12.21□□□□□ -0.45
SNAPC3-205ENST00000467062 LINC00269Q8N2A0 174 aa12.21□□□□□ -0.45
SNAPC3-205ENST00000467062 CELA1Q9UNI1 258 aa12.21□□□□□ -0.45
SNAPC3-205ENST00000467062 IGHV4-28A0A0C4DH34 117 aa12.2□□□□□ -0.46
SNAPC3-205ENST00000467062 Q1T7F1 81 aa12.2□□□□□ -0.46
SNAPC3-205ENST00000467062 OCR1Q9BZK8 76 aa12.2□□□□□ -0.46
SNAPC3-205ENST00000467062 CD164Q04900 197 aa12.18□□□□□ -0.46
SNAPC3-205ENST00000467062 Q6ZQY7 126 aa12.18□□□□□ -0.46
SNAPC3-205ENST00000467062 hDV103S1A0JD37 113 aa12.17□□□□□ -0.46
SNAPC3-205ENST00000467062 DAD1P61803 113 aa12.17□□□□□ -0.46
SNAPC3-205ENST00000467062 ANK2Q01484 3957 aa12.16□□□□□ -0.46
SNAPC3-205ENST00000467062 ANGP03950 147 aaKnown RBP12.16□□□□□ -0.46
SNAPC3-205ENST00000467062 C9orf116Q5BN46 136 aaPredicted RBP12.15□□□□□ -0.47
SNAPC3-205ENST00000467062 CD164L2Q6UWJ8 174 aa12.15□□□□□ -0.47
SNAPC3-205ENST00000467062 HIGD2AQ9BW72 106 aa12.15□□□□□ -0.47
SNAPC3-205ENST00000467062 A0A1B0GUV1 79 aa12.13□□□□□ -0.47
SNAPC3-205ENST00000467062 IGKV4-1P06312 121 aa12.12□□□□□ -0.47
SNAPC3-205ENST00000467062 STAB1Q9NY15 2570 aa12.12□□□□□ -0.47
SNAPC3-205ENST00000467062 LYRM9A8MSI8 78 aa12.12□□□□□ -0.47
SNAPC3-205ENST00000467062 Q6ZRP5 223 aa12.12□□□□□ -0.47
SNAPC3-205ENST00000467062 F8P00451 2351 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms