RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 C10orf25Q5T742 122 aa7.24□□□□□ -1.25
LINC00342-202ENST00000448494 IGHV3-11P01762 117 aa7.22□□□□□ -1.25
LINC00342-202ENST00000448494 IGHV4-30-4P0DP06 118 aa7.22□□□□□ -1.25
LINC00342-202ENST00000448494 HIGD2BQ4VC39 106 aa7.22□□□□□ -1.25
LINC00342-202ENST00000448494 A8MTW9 85 aa7.22□□□□□ -1.25
LINC00342-202ENST00000448494 MDFIQ99750 246 aa7.22□□□□□ -1.25
LINC00342-202ENST00000448494 SORL1Q92673 2214 aa7.21□□□□□ -1.26
LINC00342-202ENST00000448494 CCL24O00175 119 aa7.21□□□□□ -1.26
LINC00342-202ENST00000448494 PTPN13Q12923 2485 aa7.2□□□□□ -1.26
LINC00342-202ENST00000448494 A0A1B0GW54 56 aa7.2□□□□□ -1.26
LINC00342-202ENST00000448494 IGLV6-57P01721 117 aa7.2□□□□□ -1.26
LINC00342-202ENST00000448494 ATMQ13315 3056 aa7.2□□□□□ -1.26
LINC00342-202ENST00000448494 SPTA1P02549 2419 aa7.2□□□□□ -1.26
LINC00342-202ENST00000448494 LINC00313P59037 77 aa7.19□□□□□ -1.26
LINC00342-202ENST00000448494 KIAA0087Q14695 138 aa7.19□□□□□ -1.26
LINC00342-202ENST00000448494 IGKV3OR2-268A0A0C4DH90 116 aa7.19□□□□□ -1.26
LINC00342-202ENST00000448494 IGHV4-59P01825 116 aa7.19□□□□□ -1.26
LINC00342-202ENST00000448494 DOPEY2Q9Y3R5 2298 aa7.19□□□□□ -1.26
LINC00342-202ENST00000448494 ST20-AS1Q8NBB2 130 aa7.18□□□□□ -1.26
LINC00342-202ENST00000448494 C3orf84H3BNL1 204 aa7.18□□□□□ -1.26
LINC00342-202ENST00000448494 PRB2P02812 416 aaPredicted RBP7.18□□□□□ -1.26
LINC00342-202ENST00000448494 PRM2P04554 102 aa7.18□□□□□ -1.26
LINC00342-202ENST00000448494 KCNQ1DNQ9H478 68 aa7.18□□□□□ -1.26
LINC00342-202ENST00000448494 UBR5O95071 2799 aaPredicted RBP7.18□□□□□ -1.26
LINC00342-202ENST00000448494 KLK12Q9UKR0 248 aa7.17□□□□□ -1.26
LINC00342-202ENST00000448494 PKDREJQ9NTG1 2253 aa7.17□□□□□ -1.26
LINC00342-202ENST00000448494 IGHV4-28A0A0C4DH34 117 aa7.17□□□□□ -1.26
LINC00342-202ENST00000448494 ASB16-AS1Q495Z4 193 aa7.17□□□□□ -1.26
LINC00342-202ENST00000448494 SERTAD4-AS1Q5TG53 156 aa7.17□□□□□ -1.26
LINC00342-202ENST00000448494 LINC00959A0A1B0GUT2 108 aa7.16□□□□□ -1.26
LINC00342-202ENST00000448494 MP68P56378 58 aa7.16□□□□□ -1.26
LINC00342-202ENST00000448494 Q8NDZ9 215 aa7.16□□□□□ -1.26
LINC00342-202ENST00000448494 TRGV4A0A0C4DH28 118 aa7.16□□□□□ -1.26
LINC00342-202ENST00000448494 CASC2Q6XLA1 102 aa7.16□□□□□ -1.26
LINC00342-202ENST00000448494 SPTBN1Q01082 2364 aaKnown RBP7.14□□□□□ -1.27
LINC00342-202ENST00000448494 IGHV4-61A0A0C4DH41 118 aa7.14□□□□□ -1.27
LINC00342-202ENST00000448494 PLA2G1BP04054 148 aaKnown RBP7.14□□□□□ -1.27
LINC00342-202ENST00000448494 WFDC10AQ9H1F0 79 aa7.14□□□□□ -1.27
LINC00342-202ENST00000448494 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
LINC00342-202ENST00000448494 PIEZO2Q9H5I5 2752 aa7.14□□□□□ -1.27
LINC00342-202ENST00000448494 H3BPC8 53 aa7.13□□□□□ -1.27
LINC00342-202ENST00000448494 IGLV1-40P01703 118 aa7.13□□□□□ -1.27
LINC00342-202ENST00000448494 PLAC8Q9NZF1 115 aa7.13□□□□□ -1.27
LINC00342-202ENST00000448494 ROS1P08922 2347 aa7.13□□□□□ -1.27
LINC00342-202ENST00000448494 A0A087X002 238 aa7.13□□□□□ -1.27
LINC00342-202ENST00000448494 SPENQ96T58 3664 aaKnown RBP7.12□□□□□ -1.27
LINC00342-202ENST00000448494 UNC79Q9P2D8 2635 aa7.12□□□□□ -1.27
LINC00342-202ENST00000448494 INSP01308 110 aa7.12□□□□□ -1.27
LINC00342-202ENST00000448494 TRGV1A0A0A0MS02 117 aa7.11□□□□□ -1.27
LINC00342-202ENST00000448494 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
LINC00342-202ENST00000448494 ZFP36P26651 326 aaKnown RBP7.11□□□□□ -1.27
LINC00342-202ENST00000448494 CSMD1Q96PZ7 3565 aa7.11□□□□□ -1.27
LINC00342-202ENST00000448494 TEX15Q9BXT5 2789 aa7.1□□□□□ -1.27
LINC00342-202ENST00000448494 DSCR9P59020 149 aa7.09□□□□□ -1.27
LINC00342-202ENST00000448494 DEFB131AP59861 70 aa7.09□□□□□ -1.27
LINC00342-202ENST00000448494 C18orf65Q6ZTR6 163 aa7.09□□□□□ -1.27
LINC00342-202ENST00000448494 COA5Q86WW8 74 aa7.09□□□□□ -1.27
LINC00342-202ENST00000448494 BSNQ9UPA5 3926 aa7.09□□□□□ -1.27
LINC00342-202ENST00000448494 USP9XQ93008 2570 aaPredicted RBP7.09□□□□□ -1.27
LINC00342-202ENST00000448494 ODF3L2Q3SX64 289 aa7.08□□□□□ -1.28
LINC00342-202ENST00000448494 PCNX1Q96RV3 2341 aa7.08□□□□□ -1.28
LINC00342-202ENST00000448494 DSCR10P59022 87 aa7.08□□□□□ -1.28
LINC00342-202ENST00000448494 CNBPP62633 177 aaKnown RBP7.08□□□□□ -1.28
LINC00342-202ENST00000448494 RP1L1Q8IWN7 2480 aaPredicted RBP7.07□□□□□ -1.28
LINC00342-202ENST00000448494 SPAG11BQ08648 103 aa7.07□□□□□ -1.28
LINC00342-202ENST00000448494 DEFB109BQ30KR1 87 aa7.07□□□□□ -1.28
LINC00342-202ENST00000448494 COL12A1Q99715 3063 aa7.07□□□□□ -1.28
LINC00342-202ENST00000448494 MYO9AB2RTY4 2548 aa7.07□□□□□ -1.28
LINC00342-202ENST00000448494 FSHBP01225 129 aa7.06□□□□□ -1.28
LINC00342-202ENST00000448494 IGLV5-48A0A075B6I7 105 aa7.06□□□□□ -1.28
LINC00342-202ENST00000448494 K7EQZ3 153 aa7.05□□□□□ -1.28
LINC00342-202ENST00000448494 SPINK7P58062 85 aa7.05□□□□□ -1.28
LINC00342-202ENST00000448494 FLNCQ14315 2725 aa7.05□□□□□ -1.28
LINC00342-202ENST00000448494 NBPF19A0A087WUL8 3843 aa7.04□□□□□ -1.28
LINC00342-202ENST00000448494 KPRPQ5T749 579 aaPredicted RBP7.04□□□□□ -1.28
LINC00342-202ENST00000448494 C9orf163Q8N9P6 203 aa7.04□□□□□ -1.28
LINC00342-202ENST00000448494 A0A1B0GUV1 79 aa7.04□□□□□ -1.28
LINC00342-202ENST00000448494 TLN1Q9Y490 2541 aaKnown RBP7.04□□□□□ -1.28
LINC00342-202ENST00000448494 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
LINC00342-202ENST00000448494 TEP1Q99973 2627 aaKnown RBP7.03□□□□□ -1.28
LINC00342-202ENST00000448494 USP9YO00507 2555 aaPredicted RBP7.03□□□□□ -1.28
LINC00342-202ENST00000448494 BOD1L1Q8NFC6 3051 aa7.03□□□□□ -1.28
LINC00342-202ENST00000448494 LRRK2Q5S007 2527 aa7.03□□□□□ -1.28
LINC00342-202ENST00000448494 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.29
LINC00342-202ENST00000448494 A0A0J9YWU9 116 aa7.02□□□□□ -1.29
LINC00342-202ENST00000448494 Q8NAQ8 132 aa7.02□□□□□ -1.29
LINC00342-202ENST00000448494 H0Y9J4 135 aa7.01□□□□□ -1.29
LINC00342-202ENST00000448494 PRRC2CQ9Y520 2896 aaKnown RBP7.01□□□□□ -1.29
LINC00342-202ENST00000448494 H0Y9P7 68 aa7.01□□□□□ -1.29
LINC00342-202ENST00000448494 SPTAN1Q13813 2472 aaKnown RBP7.01□□□□□ -1.29
LINC00342-202ENST00000448494 TACC2O95359 2948 aa7□□□□□ -1.29
LINC00342-202ENST00000448494 ANKRD17O75179 2603 aaKnown RBP7□□□□□ -1.29
LINC00342-202ENST00000448494 A0A1W2PNM2 257 aa7□□□□□ -1.29
LINC00342-202ENST00000448494 A6NDX4 124 aa7□□□□□ -1.29
LINC00342-202ENST00000448494 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
LINC00342-202ENST00000448494 IGKV2D-24A0A075B6R9 120 aa7□□□□□ -1.29
LINC00342-202ENST00000448494 SPRR4Q96PI1 79 aa7□□□□□ -1.29
LINC00342-202ENST00000448494 Q8NBF4 154 aa6.99□□□□□ -1.29
LINC00342-202ENST00000448494 SPAG11AQ6PDA7 123 aa6.98□□□□□ -1.29
LINC00342-202ENST00000448494 MAP6D1Q9H9H5 199 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms