RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 C1orf137Q5JT78 98 aa1.69□□□□□ -2.14
GTF3C3-205ENST00000448087 Q86TA4 180 aa1.69□□□□□ -2.14
GTF3C3-205ENST00000448087 TRBV6-1A0A0K0K1D8 114 aa1.68□□□□□ -2.14
GTF3C3-205ENST00000448087 LOC730098B7Z3J9 87 aa1.68□□□□□ -2.14
GTF3C3-205ENST00000448087 COX7B2Q8TF08 81 aa1.68□□□□□ -2.14
GTF3C3-205ENST00000448087 TNCP24821 2201 aa1.67□□□□□ -2.14
GTF3C3-205ENST00000448087 IGKV3-7A0A075B6H7 116 aa1.67□□□□□ -2.14
GTF3C3-205ENST00000448087 JMJD7-PLA2G4BH0Y9G9 81 aa1.67□□□□□ -2.14
GTF3C3-205ENST00000448087 J3QKU1 62 aa1.67□□□□□ -2.14
GTF3C3-205ENST00000448087 PDE6GP18545 87 aa1.67□□□□□ -2.14
GTF3C3-205ENST00000448087 C9orf163Q8N9P6 203 aa1.67□□□□□ -2.14
GTF3C3-205ENST00000448087 MRPL36Q9P0J6 103 aaKnown RBP1.67□□□□□ -2.14
GTF3C3-205ENST00000448087 PSORS1C2Q9UIG4 136 aa1.67□□□□□ -2.14
GTF3C3-205ENST00000448087 TRGV4A0A0C4DH28 118 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 A0A0G2JQZ4 141 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 NUPR2A6NF83 97 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 H3BSH0 61 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 CCL18P55774 89 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 KRTAP12-1P59990 96 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 TPRXLQ17RH7 258 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 SPRR4Q96PI1 79 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 KLK9Q9UKQ9 250 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 SPAG17Q6Q759 2223 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 CEP192Q8TEP8 1941 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 IGKV3OR2-268A0A0C4DH90 116 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 LINC00959A0A1B0GUT2 108 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 H0Y9P7 68 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 NCR3O14931 201 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 ERHP84090 104 aaKnown RBP1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 DMAC1Q96GE9 116 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 CNFNQ9BYD5 112 aa1.66□□□□□ -2.14
GTF3C3-205ENST00000448087 ALPK2Q86TB3 2170 aa1.65□□□□□ -2.15
GTF3C3-205ENST00000448087 LOC110117498A0A087WWA1 95 aa1.65□□□□□ -2.15
GTF3C3-205ENST00000448087 CCL3L1P16619 93 aa1.65□□□□□ -2.15
GTF3C3-205ENST00000448087 SPATA8Q6RVD6 105 aa1.65□□□□□ -2.15
GTF3C3-205ENST00000448087 WFDC10AQ9H1F0 79 aa1.65□□□□□ -2.15
GTF3C3-205ENST00000448087 R4GMQ9 66 aa1.65□□□□□ -2.15
GTF3C3-205ENST00000448087 SSC5DA1L4H1 1573 aa1.65□□□□□ -2.15
GTF3C3-205ENST00000448087 ANKRD17O75179 2603 aaKnown RBP1.64□□□□□ -2.15
GTF3C3-205ENST00000448087 UNC13CQ8NB66 2214 aa1.64□□□□□ -2.15
GTF3C3-205ENST00000448087 RP1P56715 2156 aa1.64□□□□□ -2.15
GTF3C3-205ENST00000448087 IGHV3-64A0A075B6Q5 118 aa1.64□□□□□ -2.15
GTF3C3-205ENST00000448087 H0YGX0 51 aa1.64□□□□□ -2.15
GTF3C3-205ENST00000448087 NDUFA4O00483 81 aa1.64□□□□□ -2.15
GTF3C3-205ENST00000448087 HAMPP81172 84 aa1.64□□□□□ -2.15
GTF3C3-205ENST00000448087 DEFB114Q30KQ6 69 aa1.64□□□□□ -2.15
GTF3C3-205ENST00000448087 C10orf113Q5VZT2 155 aa1.64□□□□□ -2.15
GTF3C3-205ENST00000448087 PDE4DIPQ5VU43 2346 aa1.64□□□□□ -2.15
GTF3C3-205ENST00000448087 IGKV2-29A2NJV5 120 aaPredicted RBP1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 RNASE3P12724 160 aaKnown RBP1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 Q6ZTI0 123 aa1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 COA5Q86WW8 74 aa1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 GAFA1Q96PS6 74 aa1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 OTOGLQ3ZCN5 2332 aa1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 A0A087WTM6 91 aa1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 UQCR11O14957 56 aa1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 MGPP08493 103 aa1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 SMIM2Q9BVW6 85 aa1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 KCNQ1DNQ9H478 68 aa1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 TNRC6CQ9HCJ0 1690 aaKnown RBP1.63□□□□□ -2.15
GTF3C3-205ENST00000448087 CCL22O00626 93 aa1.62□□□□□ -2.15
GTF3C3-205ENST00000448087 DEFB103AP81534 67 aa1.62□□□□□ -2.15
GTF3C3-205ENST00000448087 PDE6HQ13956 83 aa1.62□□□□□ -2.15
GTF3C3-205ENST00000448087 DEFB112Q30KQ8 113 aa1.62□□□□□ -2.15
GTF3C3-205ENST00000448087 PCOTHQ58A44 107 aa1.62□□□□□ -2.15
GTF3C3-205ENST00000448087 LINC00472Q9H8W2 130 aa1.62□□□□□ -2.15
GTF3C3-205ENST00000448087 PRO2289Q9P1D8 64 aa1.62□□□□□ -2.15
GTF3C3-205ENST00000448087 CADP27708 2225 aa1.62□□□□□ -2.15
GTF3C3-205ENST00000448087 BPTFQ12830 3046 aa1.62□□□□□ -2.15
GTF3C3-205ENST00000448087 SORL1Q92673 2214 aa1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 TRGV2A0A075B6R0 118 aa1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 ETDCA0A1B0GVM5 59 aa1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 TRBV6-4A0A1B0GX49 114 aa1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 IGLV3-1P01715 115 aa1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 PRB1P04280 392 aa1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 RPS27P42677 84 aaKnown RBP1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 CRIP1P50238 77 aa1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 LINC00308Q8TCZ7 52 aa1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 SPACA4Q8TDM5 124 aa1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 KNTC1P50748 2209 aa1.61□□□□□ -2.15
GTF3C3-205ENST00000448087 KRTAP13-4Q3LI77 160 aa1.6□□□□□ -2.15
GTF3C3-205ENST00000448087 FN1P02751 2386 aaKnown RBP1.6□□□□□ -2.15
GTF3C3-205ENST00000448087 CACNA1CQ13936 2221 aa1.6□□□□□ -2.15
GTF3C3-205ENST00000448087 PATE1Q8WXA2 126 aa1.6□□□□□ -2.15
GTF3C3-205ENST00000448087 ZFHX2Q9C0A1 2572 aaPredicted RBP1.59□□□□□ -2.15
GTF3C3-205ENST00000448087 NBDYA0A0U1RRE5 68 aa1.59□□□□□ -2.16
GTF3C3-205ENST00000448087 H3BRN7 92 aa1.59□□□□□ -2.16
GTF3C3-205ENST00000448087 M0R2N4 97 aa1.59□□□□□ -2.16
GTF3C3-205ENST00000448087 MED13LQ71F56 2210 aa1.58□□□□□ -2.16
GTF3C3-205ENST00000448087 NDUFA1O15239 70 aa1.58□□□□□ -2.16
GTF3C3-205ENST00000448087 SMIM11BQ8TCY0 68 aa1.58□□□□□ -2.16
GTF3C3-205ENST00000448087 COL4A5P29400 1685 aa1.58□□□□□ -2.16
GTF3C3-205ENST00000448087 F5P12259 2224 aa1.58□□□□□ -2.16
GTF3C3-205ENST00000448087 COX7BP24311 80 aa1.57□□□□□ -2.16
GTF3C3-205ENST00000448087 DEFB132Q7Z7B7 95 aa1.57□□□□□ -2.16
GTF3C3-205ENST00000448087 Q96NJ1 140 aa1.57□□□□□ -2.16
GTF3C3-205ENST00000448087 MUC6Q6W4X9 2439 aa1.57□□□□□ -2.16
GTF3C3-205ENST00000448087 PLCE1Q9P212 2302 aa1.57□□□□□ -2.16
GTF3C3-205ENST00000448087 PIGYQ3MUY2 71 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms