RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 F8WEM9 126 aa0.1□□□□□ -2.39
GYPB-201ENST00000429670 ARMS2P0C7Q2 107 aa0.1□□□□□ -2.39
GYPB-201ENST00000429670 SPRR1BP22528 89 aa0.1□□□□□ -2.39
GYPB-201ENST00000429670 KLK9Q2XQG4 91 aa0.1□□□□□ -2.39
GYPB-201ENST00000429670 CRIPTQ9P021 101 aa0.1□□□□□ -2.39
GYPB-201ENST00000429670 PREX1Q8TCU6 1659 aa0.1□□□□□ -2.39
GYPB-201ENST00000429670 CSPG4Q6UVK1 2322 aa0.1□□□□□ -2.39
GYPB-201ENST00000429670 CEP162Q5TB80 1403 aa0.1□□□□□ -2.39
GYPB-201ENST00000429670 TIAM2Q8IVF5 1701 aa0.1□□□□□ -2.39
GYPB-201ENST00000429670 ATP10BO94823 1461 aa0.1□□□□□ -2.39
GYPB-201ENST00000429670 PKD1L1Q8TDX9 2849 aa0.09□□□□□ -2.39
GYPB-201ENST00000429670 LTN1O94822 1766 aa0.09□□□□□ -2.39
GYPB-201ENST00000429670 LPAP08519 4548 aa0.09□□□□□ -2.39
GYPB-201ENST00000429670 ATRQ13535 2644 aa0.09□□□□□ -2.39
GYPB-201ENST00000429670 ABCC3O15438 1527 aa0.09□□□□□ -2.39
GYPB-201ENST00000429670 FAT2Q9NYQ8 4349 aa0.09□□□□□ -2.39
GYPB-201ENST00000429670 COX8AP10176 69 aa0.09□□□□□ -2.4
GYPB-201ENST00000429670 ZNF720Q7Z2F6 126 aa0.09□□□□□ -2.4
GYPB-201ENST00000429670 SAMD9Q5K651 1589 aa0.09□□□□□ -2.4
GYPB-201ENST00000429670 C4AP0C0L4 1744 aa0.09□□□□□ -2.4
GYPB-201ENST00000429670 C4BP0C0L5 1744 aa0.09□□□□□ -2.4
GYPB-201ENST00000429670 NKTRP30414 1462 aaKnown RBP0.09□□□□□ -2.4
GYPB-201ENST00000429670 NSD1Q96L73 2696 aaPredicted RBP0.08□□□□□ -2.4
GYPB-201ENST00000429670 LEPROTL1O95214 131 aa0.08□□□□□ -2.4
GYPB-201ENST00000429670 DEFB105AQ8NG35 78 aa0.08□□□□□ -2.4
GYPB-201ENST00000429670 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
GYPB-201ENST00000429670 PSENENQ9NZ42 101 aa0.08□□□□□ -2.4
GYPB-201ENST00000429670 ZNF831Q5JPB2 1677 aa0.08□□□□□ -2.4
GYPB-201ENST00000429670 TNRC6CQ9HCJ0 1690 aaKnown RBP0.08□□□□□ -2.4
GYPB-201ENST00000429670 RB1CC1Q8TDY2 1594 aa0.07□□□□□ -2.4
GYPB-201ENST00000429670 HMCN2Q8NDA2 5059 aa0.07□□□□□ -2.4
GYPB-201ENST00000429670 D6R8Y8 96 aa0.07□□□□□ -2.4
GYPB-201ENST00000429670 PRM1P04553 51 aa0.07□□□□□ -2.4
GYPB-201ENST00000429670 DEFB112Q30KQ8 113 aa0.07□□□□□ -2.4
GYPB-201ENST00000429670 MUSTN1Q8IVN3 82 aa0.07□□□□□ -2.4
GYPB-201ENST00000429670 Q9H521 79 aa0.07□□□□□ -2.4
GYPB-201ENST00000429670 APLNQ9ULZ1 77 aa0.07□□□□□ -2.4
GYPB-201ENST00000429670 UBR3Q6ZT12 1888 aa0.07□□□□□ -2.4
GYPB-201ENST00000429670 MAP1BP46821 2468 aaKnown RBP0.06□□□□□ -2.4
GYPB-201ENST00000429670 SPINK4O60575 86 aa0.06□□□□□ -2.4
GYPB-201ENST00000429670 PEA15Q15121 130 aa0.06□□□□□ -2.4
GYPB-201ENST00000429670 C20orf78Q9BR46 151 aa0.06□□□□□ -2.4
GYPB-201ENST00000429670 HIGD1BQ9P298 99 aa0.06□□□□□ -2.4
GYPB-201ENST00000429670 MYCBP2O75592 4640 aa0.06□□□□□ -2.4
GYPB-201ENST00000429670 PIK3C2BO00750 1634 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 NESP48681 1621 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 CFAP43Q8NDM7 1665 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 DOT1LQ8TEK3 1739 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 SPTY2D1-AS1A0A0U1RR47 76 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 CPSF4LA6NMK7 179 aaKnown RBP0.05□□□□□ -2.4
GYPB-201ENST00000429670 I3L3M4 83 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 IGLC2P0DOY2 106 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 IGLC3P0DOY3 106 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 PYY3Q5JQD4 70 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 DIP2BQ9P265 1576 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 DCHS2Q6V1P9 2916 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 BSNQ9UPA5 3926 aa0.05□□□□□ -2.4
GYPB-201ENST00000429670 ATP7BP35670 1465 aa0.04□□□□□ -2.4
GYPB-201ENST00000429670 SCN11AQ9UI33 1791 aa0.04□□□□□ -2.4
GYPB-201ENST00000429670 EP300Q09472 2414 aaPredicted RBP0.04□□□□□ -2.4
GYPB-201ENST00000429670 NEXMIFQ5QGS0 1516 aa0.04□□□□□ -2.4
GYPB-201ENST00000429670 PRKDCP78527 4128 aaKnown RBP0.04□□□□□ -2.4
GYPB-201ENST00000429670 K7EP34 96 aa0.04□□□□□ -2.4
GYPB-201ENST00000429670 SMIM11AP58511 58 aa0.04□□□□□ -2.4
GYPB-201ENST00000429670 H1FX-AS1Q4G0G2 97 aa0.04□□□□□ -2.4
GYPB-201ENST00000429670 HEPN1Q6WQI6 88 aa0.04□□□□□ -2.4
GYPB-201ENST00000429670 UBE2D4Q9Y2X8 147 aa0.04□□□□□ -2.4
GYPB-201ENST00000429670 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.04□□□□□ -2.4
GYPB-201ENST00000429670 PLCH1Q4KWH8 1693 aa0.04□□□□□ -2.4
GYPB-201ENST00000429670 WNK1Q9H4A3 2382 aa0.04□□□□□ -2.4
GYPB-201ENST00000429670 LRRC9Q6ZRR7 1453 aa0.03□□□□□ -2.4
GYPB-201ENST00000429670 ADAMTS12P58397 1594 aa0.03□□□□□ -2.4
GYPB-201ENST00000429670 HMGN2P05204 90 aaKnown RBP0.03□□□□□ -2.4
GYPB-201ENST00000429670 SPRR2DP22532 72 aa0.03□□□□□ -2.4
GYPB-201ENST00000429670 MRPL34Q9BQ48 92 aaKnown RBP0.03□□□□□ -2.4
GYPB-201ENST00000429670 V9GYS6 101 aa0.03□□□□□ -2.4
GYPB-201ENST00000429670 MAGI2Q86UL8 1455 aa0.03□□□□□ -2.41
GYPB-201ENST00000429670 ALMS1Q8TCU4 4167 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 SETXQ7Z333 2677 aaKnown RBP0.02□□□□□ -2.41
GYPB-201ENST00000429670 USP32Q8NFA0 1604 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 ARFGEF2Q9Y6D5 1785 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 REV3LO60673 3130 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 IQCF6A8MYZ5 107 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 NMSQ5H8A3 153 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 LELP1Q5T871 98 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 FLNAP21333 2647 aaKnown RBP0.02□□□□□ -2.41
GYPB-201ENST00000429670 HECTD4Q9Y4D8 3996 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 APC2O95996 2303 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 KNL1Q8NG31 2342 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 NWD1Q149M9 1564 aa0.02□□□□□ -2.41
GYPB-201ENST00000429670 CHD8Q9HCK8 2581 aa0.01□□□□□ -2.41
GYPB-201ENST00000429670 DDX60LQ5H9U9 1706 aaKnown RBP0.01□□□□□ -2.41
GYPB-201ENST00000429670 RICTORQ6R327 1708 aa0.01□□□□□ -2.41
GYPB-201ENST00000429670 CYB5AP00167 134 aa0.01□□□□□ -2.41
GYPB-201ENST00000429670 PLGLAQ15195 96 aa0.01□□□□□ -2.41
GYPB-201ENST00000429670 WFDC9Q8NEX5 89 aa0.01□□□□□ -2.41
GYPB-201ENST00000429670 DCAF1Q9Y4B6 1507 aa0.01□□□□□ -2.41
GYPB-201ENST00000429670 RGPD8O14715 1765 aaPredicted RBP0.01□□□□□ -2.41
GYPB-201ENST00000429670 RGPD5Q99666 1765 aa0.01□□□□□ -2.41
GYPB-201ENST00000429670 ZANQ9Y493 2812 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms