RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 STATHP02808 62 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 SEC11AP67812 179 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 C10orf128Q5T292 105 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 BVES-AS1Q5T3Y7 98 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 C6orf201Q7Z4U5 140 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 C20orf197Q8N268 126 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 ST20Q9HBF5 79 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 ARL2-SNX15V9GYD0 113 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 AHCTF1Q8WYP5 2266 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 PLCE1Q9P212 2302 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 TACC2O95359 2948 aa1.05□□□□□ -2.24
HMGB1P49-201ENST00000418882 CADP27708 2225 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 DMXL2Q8TDJ6 3036 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 SPTBN5Q9NRC6 3674 aaKnown RBP1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 TRAV13-2A0A0B4J235 113 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 F2Z2F3 143 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 MT-ATP8P03928 68 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 CCL3L1P16619 93 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 EFNA4P52798 201 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 ELOF1P60002 83 aaKnown RBP1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 KRTDAPP60985 99 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 CCL8P80075 99 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 ZNF818PQ6ZRF7 136 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 BAGE3Q86Y29 109 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 BAGE2Q86Y30 109 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 C18orf32Q8TCD1 76 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 CCL19Q99731 98 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 PMCHL2Q9BQD1 86 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 NPVFQ9HCQ7 196 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 PSENENQ9NZ42 101 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 LINC00312Q9Y6C7 94 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 V9GYV3 84 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 ABCA4P78363 2273 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 WNK2Q9Y3S1 2297 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 EYSQ5T1H1 3165 aa1.04□□□□□ -2.24
HMGB1P49-201ENST00000418882 WDFY4Q6ZS81 3184 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 TMEM262E9PQX1 116 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 SYS1-DBNDD2H3BUS1 97 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 K7EP34 96 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 M0R135 149 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 LYNX1P0DP58 116 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 COX8AP10176 69 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 GCHFRP30047 84 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 ZNF56Q15929 161 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 PIGYQ3MUY2 71 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 PSMG4Q5JS54 123 aa1.03□□□□□ -2.24
HMGB1P49-201ENST00000418882 WDFY3Q8IZQ1 3526 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 IGKV2-40A0A087WW87 121 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 UBE2L5PA0A1B0GUS4 154 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 A0A1W2PPM0 123 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 LINC01546A6NGU7 62 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 IGKV2D-40P01614 121 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 IAPPP10997 89 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 UBE2L3P68036 154 aaKnown RBP1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 TFF3Q07654 80 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 Q86TA4 180 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 LINC01600Q96MT4 127 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 MGST2Q99735 147 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 FAM103A1Q9BTL3 118 aaKnown RBP1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 TMEM167BQ9NRX6 74 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 HIGD1BQ9P298 99 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 RABAC1Q9UI14 185 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 BOD1L1Q8NFC6 3051 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 DMXL1Q9Y485 3027 aa1.02□□□□□ -2.25
HMGB1P49-201ENST00000418882 TECTAO75443 2155 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 LOC400499M0QZD8 3231 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 TRBV6-1A0A0K0K1D8 114 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 SPTY2D1-AS1A0A0U1RR47 76 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 H3BUT2 72 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 LEPROTL1O95214 131 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 EDDM3BP56851 147 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 DEFB110Q30KQ9 67 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 COX7B2Q8TF08 81 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 FAM167A-AS1Q96KT0 104 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 PROK2Q9HC23 129 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 TMEM14BQ9NUH8 114 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 SPCS1Q9Y6A9 102 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 TPRP12270 2363 aaKnown RBP1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 PCNX1Q96RV3 2341 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 DCHS1Q96JQ0 3298 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 ADGRG4Q8IZF6 3080 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 DCHS2Q6V1P9 2916 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 PIEZO2Q9H5I5 2752 aa1.01□□□□□ -2.25
HMGB1P49-201ENST00000418882 CEP290O15078 2479 aa1□□□□□ -2.25
HMGB1P49-201ENST00000418882 ROS1P08922 2347 aa1□□□□□ -2.25
HMGB1P49-201ENST00000418882 MED13LQ71F56 2210 aa1□□□□□ -2.25
HMGB1P49-201ENST00000418882 MYO15AQ9UKN7 3530 aa1□□□□□ -2.25
HMGB1P49-201ENST00000418882 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1□□□□□ -2.25
HMGB1P49-201ENST00000418882 hADV29S1A0JD25 119 aa1□□□□□ -2.25
HMGB1P49-201ENST00000418882 SMIM13P0DJ93 91 aa1□□□□□ -2.25
HMGB1P49-201ENST00000418882 WFDC2Q14508 124 aa1□□□□□ -2.25
HMGB1P49-201ENST00000418882 ETDBQ3ZM63 59 aa1□□□□□ -2.25
HMGB1P49-201ENST00000418882 Q6ZQY7 126 aa1□□□□□ -2.25
HMGB1P49-201ENST00000418882 ASH1LQ9NR48 2969 aaKnown RBP1□□□□□ -2.25
HMGB1P49-201ENST00000418882 CNOT1A5YKK6 2376 aaKnown RBP1□□□□□ -2.25
HMGB1P49-201ENST00000418882 PTPRQQ9UMZ3 2332 aa1□□□□□ -2.25
HMGB1P49-201ENST00000418882 LRBAP50851 2863 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 APC2O95996 2303 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 TRBV7-3A0A075B6L6 115 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 TRBV25-1A0A075B6N4 114 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms