RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PRCDQ00LT1 54 aa3.79□□□□□ -1.8
ECHDC1-206ENST00000417628 C6orf223Q8N319 242 aa3.79□□□□□ -1.8
ECHDC1-206ENST00000417628 ZNRF1Q8ND25 227 aa3.79□□□□□ -1.8
ECHDC1-206ENST00000417628 SMIM2Q9BVW6 85 aa3.79□□□□□ -1.8
ECHDC1-206ENST00000417628 C11orf68Q9H3H3 251 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-206ENST00000417628 LINC00588Q9Y4M8 146 aa3.79□□□□□ -1.8
ECHDC1-206ENST00000417628 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 M0R378 163 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 ZNF73O43830 326 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 NDUFA3O95167 84 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 MIFP14174 115 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 PDE6HQ13956 83 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 TMEM30BQ3MIR4 351 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 ZNF876PQ49A33 203 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 SFTA2Q6UW10 78 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 LCA10Q71F78 164 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 TMEM61Q8N0U2 210 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 EEF1AKMT3Q96AZ1 226 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 TMEM141Q96I45 108 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 TIMM17AQ99595 171 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 Q9H3A6 140 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 DPM3Q9P2X0 92 aa3.78□□□□□ -1.8
ECHDC1-206ENST00000417628 IGKV1OR2-108A0A075B7D4 117 aa3.77□□□□□ -1.81
ECHDC1-206ENST00000417628 TRAV10A0A0B4J240 114 aa3.77□□□□□ -1.81
ECHDC1-206ENST00000417628 E7EUB6 86 aa3.77□□□□□ -1.81
ECHDC1-206ENST00000417628 SS18Q15532 418 aa3.77□□□□□ -1.81
ECHDC1-206ENST00000417628 LYZL1Q6UWQ5 148 aa3.77□□□□□ -1.81
ECHDC1-206ENST00000417628 UNQ9165/PRO28630Q6UXU0 137 aa3.77□□□□□ -1.81
ECHDC1-206ENST00000417628 LRP2P98164 4655 aa3.76□□□□□ -1.81
ECHDC1-206ENST00000417628 IGLV4-69A0A075B6H9 119 aa3.76□□□□□ -1.81
ECHDC1-206ENST00000417628 F8WEM9 126 aa3.76□□□□□ -1.81
ECHDC1-206ENST00000417628 J3QT63 122 aa3.76□□□□□ -1.81
ECHDC1-206ENST00000417628 M0R3E3 92 aa3.76□□□□□ -1.81
ECHDC1-206ENST00000417628 MIAQ16674 131 aa3.76□□□□□ -1.81
ECHDC1-206ENST00000417628 C7orf65Q6ZTY9 151 aa3.76□□□□□ -1.81
ECHDC1-206ENST00000417628 ZNF580Q9UK33 172 aa3.76□□□□□ -1.81
ECHDC1-206ENST00000417628 FAT1Q14517 4588 aa3.76□□□□□ -1.81
ECHDC1-206ENST00000417628 IGKV1D-17A0A075B6S4 117 aa3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 A0A087X002 238 aa3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 TRBV7-4A0A0J9YYF1 115 aa3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 I3L3M4 83 aa3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 K7EMT4 169 aa3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 TMEM256-PLSCR3K7ERE1 68 aa3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 RNASE4P34096 147 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 RPL36AP83881 106 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 ATP11AUNQ6ZP68 121 aa3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 LITAFQ99732 161 aa3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 OPRPNQ99935 248 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 LINC00474Q9P2X8 69 aa3.75□□□□□ -1.81
ECHDC1-206ENST00000417628 UBE2AP49459 152 aa3.74□□□□□ -1.81
ECHDC1-206ENST00000417628 CXCL6P80162 114 aa3.74□□□□□ -1.81
ECHDC1-206ENST00000417628 HAMPP81172 84 aa3.74□□□□□ -1.81
ECHDC1-206ENST00000417628 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
ECHDC1-206ENST00000417628 PATE2Q6UY27 113 aa3.74□□□□□ -1.81
ECHDC1-206ENST00000417628 MUSTN1Q8IVN3 82 aa3.74□□□□□ -1.81
ECHDC1-206ENST00000417628 DIRC1Q969H9 104 aa3.74□□□□□ -1.81
ECHDC1-206ENST00000417628 C22orf24Q9Y442 160 aa3.74□□□□□ -1.81
ECHDC1-206ENST00000417628 TRAV8-3A0A0A6YYJ7 113 aa3.73□□□□□ -1.81
ECHDC1-206ENST00000417628 TSPEAR-AS2P59090 65 aa3.73□□□□□ -1.81
ECHDC1-206ENST00000417628 C2orf66Q6UXQ4 117 aa3.73□□□□□ -1.81
ECHDC1-206ENST00000417628 ZNF833PQ6ZTB9 187 aa3.73□□□□□ -1.81
ECHDC1-206ENST00000417628 Q6ZTC4 211 aa3.73□□□□□ -1.81
ECHDC1-206ENST00000417628 PRNTQ86SH4 94 aa3.73□□□□□ -1.81
ECHDC1-206ENST00000417628 CLEC2BQ92478 149 aa3.73□□□□□ -1.81
ECHDC1-206ENST00000417628 PHLDA3Q9Y5J5 127 aa3.73□□□□□ -1.81
ECHDC1-206ENST00000417628 PKHD1L1Q86WI1 4243 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 IGKV1D-37A0A075B6S9 117 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 A0A087WZ39 114 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 NBDYA0A0U1RRE5 68 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 BUB1B-PAK6H3BSN5 160 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 IGHV3-11P01762 117 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 BAALC-AS2P0C853 105 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 RPL28P46779 137 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 CRIP1P50238 77 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 FXYD7P58549 80 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 KRTAP10-1P60331 282 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 KIAA0087Q14695 138 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 SPINK9Q5DT21 86 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 C14orf178Q8N769 122 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 Q8N9W7 124 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 FAM218AQ96MZ4 157 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 CYP4F30PQ9H0H9 118 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 LINC00846Q9NV44 126 aa3.72□□□□□ -1.81
ECHDC1-206ENST00000417628 A0A087WVE0 104 aa3.71□□□□□ -1.82
ECHDC1-206ENST00000417628 hDV103S1A0JD37 113 aa3.71□□□□□ -1.82
ECHDC1-206ENST00000417628 A6NN06 94 aa3.71□□□□□ -1.82
ECHDC1-206ENST00000417628 G3V318 75 aa3.71□□□□□ -1.82
ECHDC1-206ENST00000417628 JMJD7-PLA2G4BH0Y9G9 81 aa3.71□□□□□ -1.82
ECHDC1-206ENST00000417628 SOCS3O14543 225 aa3.71□□□□□ -1.82
ECHDC1-206ENST00000417628 DEFB4AO15263 64 aa3.71□□□□□ -1.82
ECHDC1-206ENST00000417628 IGLV1-47P01700 117 aa3.71□□□□□ -1.82
ECHDC1-206ENST00000417628 ERHP84090 104 aaKnown RBP3.71□□□□□ -1.82
ECHDC1-206ENST00000417628 DEFB131BA0A096LNP1 70 aa3.7□□□□□ -1.82
ECHDC1-206ENST00000417628 IGKV3D-7A0A0C4DH55 119 aa3.7□□□□□ -1.82
ECHDC1-206ENST00000417628 TRBV12-3P01733 135 aa3.7□□□□□ -1.82
ECHDC1-206ENST00000417628 FUSP35637 526 aaKnown RBP eCLIP3.7□□□□□ -1.82
ECHDC1-206ENST00000417628 Q8N6K4 173 aa3.7□□□□□ -1.82
ECHDC1-206ENST00000417628 NKAPP1Q8N9T2 125 aa3.7□□□□□ -1.82
ECHDC1-206ENST00000417628 UBL5Q9BZL1 73 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms