RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 CCL18P55774 89 aa9.19□□□□□ -0.94
HNF4A-204ENST00000415691 C20orf197Q8N268 126 aa9.19□□□□□ -0.94
HNF4A-204ENST00000415691 TRAV7A0A075B6U4 112 aa9.18□□□□□ -0.94
HNF4A-204ENST00000415691 TRBV10-1A0A0K0K1A3 114 aa9.18□□□□□ -0.94
HNF4A-204ENST00000415691 RPL36AP83881 106 aaKnown RBP9.18□□□□□ -0.94
HNF4A-204ENST00000415691 RPL36ALQ969Q0 106 aaKnown RBP9.18□□□□□ -0.94
HNF4A-204ENST00000415691 TRAV23DV6A0A075B6W5 121 aa9.17□□□□□ -0.94
HNF4A-204ENST00000415691 KLKP1Q107X0 134 aa9.17□□□□□ -0.94
HNF4A-204ENST00000415691 UBL5Q9BZL1 73 aa9.16□□□□□ -0.94
HNF4A-204ENST00000415691 X6R8D5 127 aa9.16□□□□□ -0.94
HNF4A-204ENST00000415691 SMIM26A0A096LP01 95 aa9.16□□□□□ -0.94
HNF4A-204ENST00000415691 TRBV6-4A0A1B0GX49 114 aa9.15□□□□□ -0.94
HNF4A-204ENST00000415691 TMEM256-PLSCR3K7ERE1 68 aa9.15□□□□□ -0.94
HNF4A-204ENST00000415691 LINC00158P58513 81 aa9.15□□□□□ -0.94
HNF4A-204ENST00000415691 ENHOQ6UWT2 76 aa9.15□□□□□ -0.94
HNF4A-204ENST00000415691 LINC00336Q6ZUF6 198 aa9.15□□□□□ -0.94
HNF4A-204ENST00000415691 NTM-AS1Q6ZSK4 140 aa9.15□□□□□ -0.95
HNF4A-204ENST00000415691 FAM19A1Q7Z5A9 133 aa9.15□□□□□ -0.95
HNF4A-204ENST00000415691 K7EQD1 137 aa9.14□□□□□ -0.95
HNF4A-204ENST00000415691 DEFB4AO15263 64 aa9.14□□□□□ -0.95
HNF4A-204ENST00000415691 DNAH9Q9NYC9 4486 aa9.13□□□□□ -0.95
HNF4A-204ENST00000415691 HUWE1Q7Z6Z7 4374 aaKnown RBP9.13□□□□□ -0.95
HNF4A-204ENST00000415691 PRKDCP78527 4128 aaKnown RBP9.13□□□□□ -0.95
HNF4A-204ENST00000415691 F8WDY8 70 aa9.13□□□□□ -0.95
HNF4A-204ENST00000415691 SLPIP03973 132 aa9.13□□□□□ -0.95
HNF4A-204ENST00000415691 PLAC8L1A1L4L8 177 aa9.12□□□□□ -0.95
HNF4A-204ENST00000415691 ATP5EP56381 51 aaPredicted RBP9.11□□□□□ -0.95
HNF4A-204ENST00000415691 TENM3Q9P273 2699 aa9.11□□□□□ -0.95
HNF4A-204ENST00000415691 IGHV4-28A0A0C4DH34 117 aa9.11□□□□□ -0.95
HNF4A-204ENST00000415691 PAX4O43316 350 aa9.11□□□□□ -0.95
HNF4A-204ENST00000415691 NDUFC1O43677 76 aa9.11□□□□□ -0.95
HNF4A-204ENST00000415691 Q8N814 137 aa9.11□□□□□ -0.95
HNF4A-204ENST00000415691 IL17DQ8TAD2 202 aa9.11□□□□□ -0.95
HNF4A-204ENST00000415691 TM2D3Q9BRN9 247 aa9.11□□□□□ -0.95
HNF4A-204ENST00000415691 Q8NAQ8 132 aa9.1□□□□□ -0.95
HNF4A-204ENST00000415691 NOP10Q9NPE3 64 aaKnown RBP9.1□□□□□ -0.95
HNF4A-204ENST00000415691 UBE2L6O14933 153 aa9.09□□□□□ -0.95
HNF4A-204ENST00000415691 C16orf74Q96GX8 76 aa9.09□□□□□ -0.95
HNF4A-204ENST00000415691 B9D2Q9BPU9 175 aa9.09□□□□□ -0.95
HNF4A-204ENST00000415691 COL7A1Q02388 2944 aa9.08□□□□□ -0.96
HNF4A-204ENST00000415691 IGHV3OR16-9A0A0B4J2B5 98 aa9.08□□□□□ -0.96
HNF4A-204ENST00000415691 MIFP14174 115 aa9.08□□□□□ -0.96
HNF4A-204ENST00000415691 FP248Q71RG6 208 aaPredicted RBP9.08□□□□□ -0.96
HNF4A-204ENST00000415691 TOMM7Q9P0U1 55 aa9.08□□□□□ -0.96
HNF4A-204ENST00000415691 LOC110117498A0A087WWA1 95 aa9.08□□□□□ -0.96
HNF4A-204ENST00000415691 A0A087WZ39 114 aa9.08□□□□□ -0.96
HNF4A-204ENST00000415691 Q6ZTI0 123 aa9.07□□□□□ -0.96
HNF4A-204ENST00000415691 C1orf43Q9BWL3 253 aa9.07□□□□□ -0.96
HNF4A-204ENST00000415691 TRGV1A0A0A0MS02 117 aa9.06□□□□□ -0.96
HNF4A-204ENST00000415691 Q6ZQT0 140 aa9.05□□□□□ -0.96
HNF4A-204ENST00000415691 CELA1Q9UNI1 258 aa9.05□□□□□ -0.96
HNF4A-204ENST00000415691 A0A0J9YWU9 116 aa9.05□□□□□ -0.96
HNF4A-204ENST00000415691 CXCL6P80162 114 aa9.05□□□□□ -0.96
HNF4A-204ENST00000415691 DEFB130BP0DP73 79 aa9.04□□□□□ -0.96
HNF4A-204ENST00000415691 DEFB130AP0DP74 79 aa9.04□□□□□ -0.96
HNF4A-204ENST00000415691 NANOS2P60321 138 aaKnown RBP9.04□□□□□ -0.96
HNF4A-204ENST00000415691 LINC01547P58512 204 aaPredicted RBP9.04□□□□□ -0.96
HNF4A-204ENST00000415691 FBN3Q75N90 2809 aa9.04□□□□□ -0.96
HNF4A-204ENST00000415691 PDE6GP18545 87 aa9.03□□□□□ -0.96
HNF4A-204ENST00000415691 F8WEM9 126 aa9.02□□□□□ -0.97
HNF4A-204ENST00000415691 RBM3P98179 157 aaKnown RBP9.02□□□□□ -0.97
HNF4A-204ENST00000415691 TRBV7-6A0A0J9YX20 115 aa9.02□□□□□ -0.97
HNF4A-204ENST00000415691 ZNF561-AS1K7EIQ3 104 aa9.02□□□□□ -0.97
HNF4A-204ENST00000415691 C6orf223Q8N319 242 aa9.02□□□□□ -0.97
HNF4A-204ENST00000415691 H3BQ85 93 aa9.01□□□□□ -0.97
HNF4A-204ENST00000415691 RMI2Q96E14 147 aa9.01□□□□□ -0.97
HNF4A-204ENST00000415691 TRGV2A0A075B6R0 118 aa9□□□□□ -0.97
HNF4A-204ENST00000415691 LYRM9A8MSI8 78 aa9□□□□□ -0.97
HNF4A-204ENST00000415691 SPART-AS1P0CW21 52 aa9□□□□□ -0.97
HNF4A-204ENST00000415691 ERC2-IT1O76042 136 aa9□□□□□ -0.97
HNF4A-204ENST00000415691 Q6ZVQ6 151 aa9□□□□□ -0.97
HNF4A-204ENST00000415691 LINC00612Q8N6U2 182 aa9□□□□□ -0.97
HNF4A-204ENST00000415691 C11orf68Q9H3H3 251 aaKnown RBP9□□□□□ -0.97
HNF4A-204ENST00000415691 TRAV10A0A0B4J240 114 aa8.99□□□□□ -0.97
HNF4A-204ENST00000415691 TRBV7-4A0A0J9YYF1 115 aa8.99□□□□□ -0.97
HNF4A-204ENST00000415691 Q8IZM0 81 aa8.99□□□□□ -0.97
HNF4A-204ENST00000415691 C6orf226Q5I0X4 101 aa8.99□□□□□ -0.97
HNF4A-204ENST00000415691 SNURFQ9Y675 71 aa8.99□□□□□ -0.97
HNF4A-204ENST00000415691 DAD1P61803 113 aa8.98□□□□□ -0.97
HNF4A-204ENST00000415691 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
HNF4A-204ENST00000415691 IGLV4-60A0A075B6I1 120 aa8.97□□□□□ -0.97
HNF4A-204ENST00000415691 COX17Q14061 63 aa8.97□□□□□ -0.97
HNF4A-204ENST00000415691 C11orf45Q8TAV5 145 aa8.97□□□□□ -0.97
HNF4A-204ENST00000415691 PKIGQ9Y2B9 76 aa8.97□□□□□ -0.97
HNF4A-204ENST00000415691 STAB2Q8WWQ8 2551 aa8.96□□□□□ -0.98
HNF4A-204ENST00000415691 TRBV6-8A0A0A6YYG3 113 aa8.96□□□□□ -0.98
HNF4A-204ENST00000415691 HAMPP81172 84 aa8.96□□□□□ -0.98
HNF4A-204ENST00000415691 Q6ZTC4 211 aa8.96□□□□□ -0.98
HNF4A-204ENST00000415691 LINC00959A0A1B0GUT2 108 aa8.95□□□□□ -0.98
HNF4A-204ENST00000415691 HTN3P15516 51 aa8.95□□□□□ -0.98
HNF4A-204ENST00000415691 Q8N3U1 123 aa8.95□□□□□ -0.98
HNF4A-204ENST00000415691 IGKV3OR2-268A0A0C4DH90 116 aa8.94□□□□□ -0.98
HNF4A-204ENST00000415691 C1orf195Q5TG92 126 aa8.94□□□□□ -0.98
HNF4A-204ENST00000415691 LINC00474Q9P2X8 69 aa8.94□□□□□ -0.98
HNF4A-204ENST00000415691 V9GYY9 64 aa8.94□□□□□ -0.98
HNF4A-204ENST00000415691 TGP01266 2768 aa8.93□□□□□ -0.98
HNF4A-204ENST00000415691 C6orf99Q4VX62 202 aa8.93□□□□□ -0.98
HNF4A-204ENST00000415691 TRGV4A0A0C4DH28 118 aa8.93□□□□□ -0.98
HNF4A-204ENST00000415691 BRK1Q8WUW1 75 aa8.92□□□□□ -0.98
HNF4A-204ENST00000415691 LAMTOR3Q9UHA4 124 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms