RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 WNK2Q9Y3S1 2297 aa2.35□□□□□ -2.03
XRCC4-203ENST00000396027 URB1O60287 2271 aaKnown RBP2.34□□□□□ -2.03
XRCC4-203ENST00000396027 A0A0J9YWU9 116 aa2.34□□□□□ -2.03
XRCC4-203ENST00000396027 A8MTW9 85 aa2.34□□□□□ -2.03
XRCC4-203ENST00000396027 ACYP2P14621 99 aa2.34□□□□□ -2.03
XRCC4-203ENST00000396027 COX7A1P24310 79 aa2.34□□□□□ -2.03
XRCC4-203ENST00000396027 Q8N9L7 120 aa2.34□□□□□ -2.03
XRCC4-203ENST00000396027 Q8NBF4 154 aa2.34□□□□□ -2.03
XRCC4-203ENST00000396027 TOMM7Q9P0U1 55 aa2.34□□□□□ -2.03
XRCC4-203ENST00000396027 CACNA1GO43497 2377 aa2.34□□□□□ -2.04
XRCC4-203ENST00000396027 PTPRQQ9UMZ3 2332 aa2.34□□□□□ -2.04
XRCC4-203ENST00000396027 SPTBN5Q9NRC6 3674 aaKnown RBP2.34□□□□□ -2.04
XRCC4-203ENST00000396027 BRWD1Q9NSI6 2320 aa2.33□□□□□ -2.04
XRCC4-203ENST00000396027 IGLV1-50A0A075B6I6 118 aa2.33□□□□□ -2.04
XRCC4-203ENST00000396027 IGKV2D-24A0A075B6R9 120 aa2.33□□□□□ -2.04
XRCC4-203ENST00000396027 PINLYPA6NC86 204 aa2.33□□□□□ -2.04
XRCC4-203ENST00000396027 ODF3BA8MYP8 253 aa2.33□□□□□ -2.04
XRCC4-203ENST00000396027 CMC4P56277 68 aaPredicted RBP2.33□□□□□ -2.04
XRCC4-203ENST00000396027 DEFB108BQ8NET1 73 aa2.33□□□□□ -2.04
XRCC4-203ENST00000396027 CR1P17927 2039 aa2.33□□□□□ -2.04
XRCC4-203ENST00000396027 DNAH14Q0VDD8 3507 aa2.33□□□□□ -2.04
XRCC4-203ENST00000396027 ASCC3Q8N3C0 2202 aaKnown RBP2.33□□□□□ -2.04
XRCC4-203ENST00000396027 A0A1W2PNM2 257 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 INAFM1C9JVW0 142 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 APELAP0DMC3 54 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 DEFB131AP59861 70 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 Q8NDZ9 215 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 LAMA2P24043 3122 aaKnown RBP2.32□□□□□ -2.04
XRCC4-203ENST00000396027 TRANK1O15050 2925 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 C5orf42Q9H799 3197 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 IGLV9-49A0A0B4J1Y8 123 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 A0A1B0GU69 56 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 A8MWP4 228 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 CAMK2N1Q7Z7J9 78 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 C4orf3Q8WVX3 66 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 RHPN1-AS1Q9BWJ2 59 aa2.32□□□□□ -2.04
XRCC4-203ENST00000396027 ASXL3Q9C0F0 2248 aa2.31□□□□□ -2.04
XRCC4-203ENST00000396027 LAMA3Q16787 3333 aa2.31□□□□□ -2.04
XRCC4-203ENST00000396027 PRB4P10163 310 aaPredicted RBP2.31□□□□□ -2.04
XRCC4-203ENST00000396027 CASC10Q5T4H9 136 aa2.31□□□□□ -2.04
XRCC4-203ENST00000396027 SPINK14Q6IE38 97 aa2.31□□□□□ -2.04
XRCC4-203ENST00000396027 CSAG1Q6PB30 78 aa2.31□□□□□ -2.04
XRCC4-203ENST00000396027 MKI67P46013 3256 aaKnown RBP2.3□□□□□ -2.04
XRCC4-203ENST00000396027 LINC00959A0A1B0GUT2 108 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 A8MU10 97 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 LYNX1G3V0Z9 82 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 H3BUX3 64 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 INSP01308 110 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 CHTF8P0CG12 524 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 SPINK7P58062 85 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 Q6ZR54 194 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 LINC00612Q8N6U2 182 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 Q8N9W7 124 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 CSNK1G2-AS1Q8NCQ2 148 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 FAM215AQ9Y5M1 114 aa2.3□□□□□ -2.04
XRCC4-203ENST00000396027 SORL1Q92673 2214 aa2.29□□□□□ -2.04
XRCC4-203ENST00000396027 REV3LO60673 3130 aa2.29□□□□□ -2.04
XRCC4-203ENST00000396027 IGKV2D-30A0A075B6S6 120 aa2.29□□□□□ -2.04
XRCC4-203ENST00000396027 TFF1P04155 84 aa2.29□□□□□ -2.04
XRCC4-203ENST00000396027 DSCR10P59022 87 aa2.29□□□□□ -2.04
XRCC4-203ENST00000396027 PRAC1Q96KF2 57 aa2.29□□□□□ -2.04
XRCC4-203ENST00000396027 ZNRD1Q9P1U0 126 aa2.29□□□□□ -2.04
XRCC4-203ENST00000396027 USP34Q70CQ2 3546 aa2.28□□□□□ -2.04
XRCC4-203ENST00000396027 IGLV5-37A0A075B6J1 123 aa2.28□□□□□ -2.04
XRCC4-203ENST00000396027 TRGV1A0A0A0MS02 117 aa2.28□□□□□ -2.04
XRCC4-203ENST00000396027 PRR4Q16378 134 aa2.28□□□□□ -2.04
XRCC4-203ENST00000396027 ST20-AS1Q8NBB2 130 aa2.28□□□□□ -2.04
XRCC4-203ENST00000396027 PRR34Q9NV39 138 aa2.28□□□□□ -2.04
XRCC4-203ENST00000396027 ABCA4P78363 2273 aa2.28□□□□□ -2.04
XRCC4-203ENST00000396027 ICE1Q9Y2F5 2266 aa2.28□□□□□ -2.04
XRCC4-203ENST00000396027 UNC80Q8N2C7 3258 aa2.28□□□□□ -2.04
XRCC4-203ENST00000396027 XIRP2A4UGR9 3374 aa2.28□□□□□ -2.04
XRCC4-203ENST00000396027 NUPR2A6NF83 97 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 B4DSR2 109 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 K7EQZ3 153 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 M0R2N4 97 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 ANGP03950 147 aaKnown RBP2.27□□□□□ -2.05
XRCC4-203ENST00000396027 LINC00483Q53H64 154 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 TMEM105Q8N8V8 129 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 ANAPC11Q9NYG5 84 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 KLK12Q9UKR0 248 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 CDH23Q9H251 3354 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 MED13LQ71F56 2210 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 IGLV8-61A0A075B6I0 122 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 A0A1W2PNU3 283 aaPredicted RBP2.27□□□□□ -2.05
XRCC4-203ENST00000396027 EGFEM1PQ0D2K5 195 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 SPINK13Q1W4C9 94 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 C7orf33Q8WU49 177 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 C16orf74Q96GX8 76 aa2.27□□□□□ -2.05
XRCC4-203ENST00000396027 CACNA1BQ00975 2339 aa2.26□□□□□ -2.05
XRCC4-203ENST00000396027 IGKV3-7A0A075B6H7 116 aa2.26□□□□□ -2.05
XRCC4-203ENST00000396027 IGKV3-20P01619 116 aa2.26□□□□□ -2.05
XRCC4-203ENST00000396027 RPL37AP61513 92 aaKnown RBP2.26□□□□□ -2.05
XRCC4-203ENST00000396027 LUZP6Q538Z0 58 aa2.26□□□□□ -2.05
XRCC4-203ENST00000396027 LYPD2Q6UXB3 125 aa2.26□□□□□ -2.05
XRCC4-203ENST00000396027 C5orf56Q8N8D9 126 aa2.26□□□□□ -2.05
XRCC4-203ENST00000396027 C20orf166-AS1Q96NR2 134 aa2.26□□□□□ -2.05
XRCC4-203ENST00000396027 C8orf17Q9NRJ1 99 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms