RNA–Protein interactions for RNA: ENST00000360047.9

PDE4D-205, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 3,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-205ENST00000360047 REG3GQ6UW15 175 aa3.49□□□□□ -1.85
PDE4D-205ENST00000360047 CHCHD10Q8WYQ3 142 aaPredicted RBP3.49□□□□□ -1.85
PDE4D-205ENST00000360047 OBSCN-AS1Q96MR7 158 aa3.49□□□□□ -1.85
PDE4D-205ENST00000360047 IGKV3D-20A0A0C4DH25 116 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 SOCS3O14543 225 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 PRR3P79522 188 aaKnown RBP3.48□□□□□ -1.85
PDE4D-205ENST00000360047 C20orf197Q8N268 126 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 NOTCH1P46531 2555 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 VWFP04275 2813 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 IGKV3D-7A0A0C4DH55 119 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 NXPH4O95158 308 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 DEFB1P60022 68 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 SPANXN1Q5VSR9 72 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 A8MU10 97 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 NKAPP1Q8N9T2 125 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
PDE4D-205ENST00000360047 A0A087WVE0 104 aa3.47□□□□□ -1.85
PDE4D-205ENST00000360047 IBA57-AS1B1ANH7 110 aa3.47□□□□□ -1.85
PDE4D-205ENST00000360047 FUSP35637 526 aaKnown RBP eCLIP3.47□□□□□ -1.85
PDE4D-205ENST00000360047 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
PDE4D-205ENST00000360047 PHF5AQ7RTV0 110 aaKnown RBP3.47□□□□□ -1.85
PDE4D-205ENST00000360047 Q8TAT8 98 aa3.47□□□□□ -1.85
PDE4D-205ENST00000360047 PRAC2D3DTV9 90 aa3.47□□□□□ -1.85
PDE4D-205ENST00000360047 KIAA0087Q14695 138 aa3.47□□□□□ -1.85
PDE4D-205ENST00000360047 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.85
PDE4D-205ENST00000360047 TRAV13-2A0A0B4J235 113 aa3.46□□□□□ -1.85
PDE4D-205ENST00000360047 POLR2KP53803 58 aaKnown RBP3.46□□□□□ -1.85
PDE4D-205ENST00000360047 ADAMTSL4-AS1Q5T5F5 129 aa3.46□□□□□ -1.85
PDE4D-205ENST00000360047 LINC00846Q9NV44 126 aa3.46□□□□□ -1.85
PDE4D-205ENST00000360047 CELA1Q9UNI1 258 aa3.46□□□□□ -1.85
PDE4D-205ENST00000360047 IGHV3OR16-12A0A075B7B8 117 aa3.46□□□□□ -1.86
PDE4D-205ENST00000360047 FAM229BQ4G0N7 80 aa3.46□□□□□ -1.86
PDE4D-205ENST00000360047 B9D2Q9BPU9 175 aa3.46□□□□□ -1.86
PDE4D-205ENST00000360047 C11orf21Q9P2W6 132 aa3.46□□□□□ -1.86
PDE4D-205ENST00000360047 IGHV3-30-3P0DP02 117 aa3.46□□□□□ -1.86
PDE4D-205ENST00000360047 RPL28P46779 137 aaKnown RBP3.46□□□□□ -1.86
PDE4D-205ENST00000360047 SPINK13Q1W4C9 94 aa3.46□□□□□ -1.86
PDE4D-205ENST00000360047 DEFB135Q30KP9 77 aa3.46□□□□□ -1.86
PDE4D-205ENST00000360047 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
PDE4D-205ENST00000360047 OPRPNQ99935 248 aaPredicted RBP3.46□□□□□ -1.86
PDE4D-205ENST00000360047 NBEAL1Q6ZS30 2694 aa3.46□□□□□ -1.86
PDE4D-205ENST00000360047 PKD1L1Q8TDX9 2849 aa3.45□□□□□ -1.86
PDE4D-205ENST00000360047 TRBV6-5A0A0K0K1A5 114 aa3.45□□□□□ -1.86
PDE4D-205ENST00000360047 HTN1P15515 57 aa3.45□□□□□ -1.86
PDE4D-205ENST00000360047 RNASE4P34096 147 aaKnown RBP3.45□□□□□ -1.86
PDE4D-205ENST00000360047 NDUFA12Q9UI09 145 aa3.45□□□□□ -1.86
PDE4D-205ENST00000360047 LENEPQ9Y5L5 61 aa3.45□□□□□ -1.86
PDE4D-205ENST00000360047 CMYA5Q8N3K9 4069 aa3.45□□□□□ -1.86
PDE4D-205ENST00000360047 INSP01308 110 aa3.44□□□□□ -1.86
PDE4D-205ENST00000360047 UBE2BP63146 152 aa3.44□□□□□ -1.86
PDE4D-205ENST00000360047 C9orf47Q6ZRZ4 202 aa3.44□□□□□ -1.86
PDE4D-205ENST00000360047 C7orf65Q6ZTY9 151 aa3.44□□□□□ -1.86
PDE4D-205ENST00000360047 DIRC1Q969H9 104 aa3.44□□□□□ -1.86
PDE4D-205ENST00000360047 TRAV12-3A0A0B4J271 114 aa3.44□□□□□ -1.86
PDE4D-205ENST00000360047 SND1-IT1Q9HBX3 110 aa3.44□□□□□ -1.86
PDE4D-205ENST00000360047 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.44□□□□□ -1.86
PDE4D-205ENST00000360047 TRAV23DV6A0A075B6W5 121 aa3.43□□□□□ -1.86
PDE4D-205ENST00000360047 F8WEM9 126 aa3.43□□□□□ -1.86
PDE4D-205ENST00000360047 RPL39P62891 51 aaKnown RBP3.43□□□□□ -1.86
PDE4D-205ENST00000360047 MUC4Q99102 2169 aa3.43□□□□□ -1.86
PDE4D-205ENST00000360047 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
PDE4D-205ENST00000360047 A8MTW9 85 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 NDUFA1O15239 70 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 ERC2-IT1O76042 136 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 LINC00308Q8TCZ7 52 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 KIF25-AS1Q9Y6Z4 181 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 DNAH3Q8TD57 4116 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 TRAV21A0A0B4J279 112 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 A6NN06 94 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 MGPP08493 103 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 GIG44P09565 113 aaPredicted RBP3.42□□□□□ -1.86
PDE4D-205ENST00000360047 LINC00315P59091 139 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 ESRGQ1W209 222 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 SPTSSBQ8NFR3 76 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 C14orf132Q9NPU4 83 aa3.42□□□□□ -1.86
PDE4D-205ENST00000360047 H0YGX0 51 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 MIFP14174 115 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 PHLDA3Q9Y5J5 127 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 IGLV4-3A0A075B6K6 122 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 IGHV3-64A0A075B6Q5 118 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 DEFB4AO15263 64 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 SEC61BP60468 96 aaKnown RBP3.41□□□□□ -1.86
PDE4D-205ENST00000360047 ADM2Q7Z4H4 148 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 ZFAND2AQ8N6M9 145 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 C20orf203Q8NBC4 194 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 CSNK1G2-AS1Q8NCQ2 148 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 IGHV1OR15-1A0A075B7D0 117 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 IGHV3OR16-9A0A0B4J2B5 98 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 PSPHP1O15172 72 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 PRM2P04554 102 aa3.41□□□□□ -1.86
PDE4D-205ENST00000360047 IGHV4-28A0A0C4DH34 117 aa3.4□□□□□ -1.86
PDE4D-205ENST00000360047 A0A0J9YWU9 116 aa3.4□□□□□ -1.86
PDE4D-205ENST00000360047 S100A4P26447 101 aaKnown RBP3.4□□□□□ -1.86
PDE4D-205ENST00000360047 NANOS2P60321 138 aaKnown RBP3.4□□□□□ -1.86
PDE4D-205ENST00000360047 Q1T7F1 81 aa3.4□□□□□ -1.86
PDE4D-205ENST00000360047 PRR9Q5T870 116 aa3.4□□□□□ -1.86
PDE4D-205ENST00000360047 RMI2Q96E14 147 aa3.4□□□□□ -1.86
PDE4D-205ENST00000360047 JMJD7-PLA2G4BH0Y9G9 81 aa3.4□□□□□ -1.87
PDE4D-205ENST00000360047 SUMO4Q6EEV6 95 aa3.4□□□□□ -1.87
PDE4D-205ENST00000360047 ENHOQ6UWT2 76 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms