RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 RNASE4P34096 147 aaKnown RBP7.44□□□□□ -1.22
RTN3-204ENST00000354497 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.44□□□□□ -1.22
RTN3-204ENST00000354497 ZNF561-AS1K7EIQ3 104 aa7.44□□□□□ -1.22
RTN3-204ENST00000354497 ATP5EP56381 51 aaPredicted RBP7.44□□□□□ -1.22
RTN3-204ENST00000354497 ERCC8Q13216 396 aa7.44□□□□□ -1.22
RTN3-204ENST00000354497 Q6ZSA8 131 aa7.44□□□□□ -1.22
RTN3-204ENST00000354497 SCXQ7RTU7 201 aa7.44□□□□□ -1.22
RTN3-204ENST00000354497 LINC00305Q7Z4B0 112 aa7.44□□□□□ -1.22
RTN3-204ENST00000354497 EXOC3-AS1Q8N2X6 119 aa7.44□□□□□ -1.22
RTN3-204ENST00000354497 TOMM6Q96B49 74 aa7.44□□□□□ -1.22
RTN3-204ENST00000354497 TMEM223A0PJW6 202 aa7.43□□□□□ -1.22
RTN3-204ENST00000354497 SDHAF1A6NFY7 115 aa7.43□□□□□ -1.22
RTN3-204ENST00000354497 C11orf86A6NJI1 115 aa7.43□□□□□ -1.22
RTN3-204ENST00000354497 LECT2O14960 151 aa7.43□□□□□ -1.22
RTN3-204ENST00000354497 Q6JHZ5 121 aa7.43□□□□□ -1.22
RTN3-204ENST00000354497 IGHV3-38A0A0C4DH36 116 aa7.42□□□□□ -1.22
RTN3-204ENST00000354497 IGHV3-30-3P0DP02 117 aa7.42□□□□□ -1.22
RTN3-204ENST00000354497 FAM19A1Q7Z5A9 133 aa7.42□□□□□ -1.22
RTN3-204ENST00000354497 DSCR8Q96T75 97 aa7.42□□□□□ -1.22
RTN3-204ENST00000354497 PKHD1L1Q86WI1 4243 aa7.41□□□□□ -1.22
RTN3-204ENST00000354497 A0A0U1RRA0 63 aa7.41□□□□□ -1.22
RTN3-204ENST00000354497 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
RTN3-204ENST00000354497 IBA57-AS1B1ANH7 110 aa7.41□□□□□ -1.22
RTN3-204ENST00000354497 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
RTN3-204ENST00000354497 CRIP1P50238 77 aa7.41□□□□□ -1.22
RTN3-204ENST00000354497 CD164Q04900 197 aa7.41□□□□□ -1.22
RTN3-204ENST00000354497 PDE6HQ13956 83 aa7.41□□□□□ -1.22
RTN3-204ENST00000354497 LOC100131303A0A0U1RQF7 123 aa7.4□□□□□ -1.22
RTN3-204ENST00000354497 KRTAP10-4P60372 401 aaPredicted RBP7.4□□□□□ -1.22
RTN3-204ENST00000354497 PRNTQ86SH4 94 aa7.4□□□□□ -1.22
RTN3-204ENST00000354497 IGHV1OR15-1A0A075B7D0 117 aa7.39□□□□□ -1.23
RTN3-204ENST00000354497 KLLNB2CW77 178 aa7.39□□□□□ -1.23
RTN3-204ENST00000354497 ZNF22P17026 224 aaPredicted RBP7.39□□□□□ -1.23
RTN3-204ENST00000354497 LINC01556Q5JQF7 62 aa7.39□□□□□ -1.23
RTN3-204ENST00000354497 AMELXQ99217 191 aa7.39□□□□□ -1.23
RTN3-204ENST00000354497 TIMM21Q9BVV7 248 aa7.39□□□□□ -1.23
RTN3-204ENST00000354497 PKIGQ9Y2B9 76 aa7.39□□□□□ -1.23
RTN3-204ENST00000354497 M0R3E3 92 aa7.38□□□□□ -1.23
RTN3-204ENST00000354497 NRACQ8N912 160 aa7.38□□□□□ -1.23
RTN3-204ENST00000354497 SMCR5Q8TEV8 140 aa7.38□□□□□ -1.23
RTN3-204ENST00000354497 TRIAP1O43715 76 aa7.37□□□□□ -1.23
RTN3-204ENST00000354497 PPP1R17O96001 155 aa7.37□□□□□ -1.23
RTN3-204ENST00000354497 RPL37AP61513 92 aaKnown RBP7.37□□□□□ -1.23
RTN3-204ENST00000354497 PRR9Q5T870 116 aa7.37□□□□□ -1.23
RTN3-204ENST00000354497 Q6ZRU5 148 aa7.37□□□□□ -1.23
RTN3-204ENST00000354497 TRBV19A0A075B6N1 114 aa7.36□□□□□ -1.23
RTN3-204ENST00000354497 M0R381 172 aa7.36□□□□□ -1.23
RTN3-204ENST00000354497 ATP5EP2Q5VTU8 51 aa7.36□□□□□ -1.23
RTN3-204ENST00000354497 CIRBP-AS1Q8TBR5 109 aa7.36□□□□□ -1.23
RTN3-204ENST00000354497 TMEM141Q96I45 108 aa7.36□□□□□ -1.23
RTN3-204ENST00000354497 SCGB3A1Q96QR1 104 aa7.36□□□□□ -1.23
RTN3-204ENST00000354497 IGHV3-16A0A0C4DH30 117 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 NDUFC1O43677 76 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 SH2D1AO60880 128 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 LRP2P98164 4655 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 SFTA2Q6UW10 78 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 SMIM2Q9BVW6 85 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 CYSTM1Q9H1C7 97 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 IGKV2-40A0A087WW87 121 aaPredicted RBP7.35□□□□□ -1.23
RTN3-204ENST00000354497 TRBV10-3A0A0K0K1G6 114 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 LEPROTO15243 131 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 IGKV2D-40P01614 121 aaPredicted RBP7.35□□□□□ -1.23
RTN3-204ENST00000354497 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 C9orf47Q6ZRZ4 202 aa7.35□□□□□ -1.23
RTN3-204ENST00000354497 MRPL53Q96EL3 112 aaKnown RBP7.35□□□□□ -1.23
RTN3-204ENST00000354497 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
RTN3-204ENST00000354497 A0A0J9YXY3 114 aa7.34□□□□□ -1.23
RTN3-204ENST00000354497 SMKR1H3BMG3 65 aa7.34□□□□□ -1.23
RTN3-204ENST00000354497 TIRAPP58753 221 aa7.34□□□□□ -1.23
RTN3-204ENST00000354497 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
RTN3-204ENST00000354497 ZFAND2AQ8N6M9 145 aa7.34□□□□□ -1.23
RTN3-204ENST00000354497 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.34□□□□□ -1.23
RTN3-204ENST00000354497 USP17L23D6RBM5 183 aa7.33□□□□□ -1.24
RTN3-204ENST00000354497 Q8TAT8 98 aa7.33□□□□□ -1.24
RTN3-204ENST00000354497 TIMM17AQ99595 171 aa7.33□□□□□ -1.24
RTN3-204ENST00000354497 KRTAP9-2Q9BYQ4 174 aa7.33□□□□□ -1.24
RTN3-204ENST00000354497 IGLV4-69A0A075B6H9 119 aa7.32□□□□□ -1.24
RTN3-204ENST00000354497 TIMM17BO60830 172 aa7.32□□□□□ -1.24
RTN3-204ENST00000354497 KLKP1Q107X0 134 aa7.32□□□□□ -1.24
RTN3-204ENST00000354497 Q1RN00 199 aa7.32□□□□□ -1.24
RTN3-204ENST00000354497 S100A7L2Q5SY68 101 aa7.32□□□□□ -1.24
RTN3-204ENST00000354497 TRAV8-3A0A0A6YYJ7 113 aa7.31□□□□□ -1.24
RTN3-204ENST00000354497 LGALS3P17931 250 aaKnown RBP7.31□□□□□ -1.24
RTN3-204ENST00000354497 LELP1Q5T871 98 aa7.31□□□□□ -1.24
RTN3-204ENST00000354497 FP248Q71RG6 208 aaPredicted RBP7.31□□□□□ -1.24
RTN3-204ENST00000354497 TMEM243Q9BU79 118 aa7.31□□□□□ -1.24
RTN3-204ENST00000354497 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.3□□□□□ -1.24
RTN3-204ENST00000354497 MT1HL1P0DM35 61 aa7.3□□□□□ -1.24
RTN3-204ENST00000354497 GATA1P15976 413 aaPredicted RBP7.3□□□□□ -1.24
RTN3-204ENST00000354497 RHOHQ15669 191 aa7.3□□□□□ -1.24
RTN3-204ENST00000354497 MUSTN1Q8IVN3 82 aa7.3□□□□□ -1.24
RTN3-204ENST00000354497 LINC01561Q8N1V8 128 aa7.3□□□□□ -1.24
RTN3-204ENST00000354497 IGIPA6NJ69 53 aa7.29□□□□□ -1.24
RTN3-204ENST00000354497 DAZ4Q86SG3 579 aaKnown RBP7.29□□□□□ -1.24
RTN3-204ENST00000354497 DAZ3Q9NR90 486 aaKnown RBP7.29□□□□□ -1.24
RTN3-204ENST00000354497 UBE2D4Q9Y2X8 147 aa7.29□□□□□ -1.24
RTN3-204ENST00000354497 IGHV3-73A0A0B4J1V6 119 aa7.28□□□□□ -1.24
RTN3-204ENST00000354497 TRAV26-2A0A0B4J265 109 aa7.28□□□□□ -1.24
RTN3-204ENST00000354497 H7BZZ5 65 aa7.28□□□□□ -1.24
RTN3-204ENST00000354497 C2orf66Q6UXQ4 117 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms