RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 NBPF19A0A087WUL8 3843 aa6.57□□□□□ -1.36
PTCHD4-201ENST00000339488 UBE2AP49459 152 aa6.57□□□□□ -1.36
PTCHD4-201ENST00000339488 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
PTCHD4-201ENST00000339488 IGHV4-28A0A0C4DH34 117 aa6.56□□□□□ -1.36
PTCHD4-201ENST00000339488 A6NED7 52 aa6.56□□□□□ -1.36
PTCHD4-201ENST00000339488 ST20-AS1Q8NBB2 130 aa6.55□□□□□ -1.36
PTCHD4-201ENST00000339488 TRGV2A0A075B6R0 118 aa6.55□□□□□ -1.36
PTCHD4-201ENST00000339488 TRGV1A0A0A0MS02 117 aa6.55□□□□□ -1.36
PTCHD4-201ENST00000339488 C11orf44Q8N8P7 122 aa6.55□□□□□ -1.36
PTCHD4-201ENST00000339488 C10orf99Q6UWK7 81 aa6.54□□□□□ -1.36
PTCHD4-201ENST00000339488 TENM4Q6N022 2769 aa6.54□□□□□ -1.36
PTCHD4-201ENST00000339488 CENPEQ02224 2701 aa6.54□□□□□ -1.36
PTCHD4-201ENST00000339488 IGHV3OR16-9A0A0B4J2B5 98 aa6.54□□□□□ -1.36
PTCHD4-201ENST00000339488 JMJD1CQ15652 2540 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 TRBV6-8A0A0A6YYG3 113 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 KLK9Q2XQG4 91 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 BRD3OSQ6XYD6 125 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 HELZ2Q9BYK8 2649 aaKnown RBP6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 DEFB131AP59861 70 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 C9orf66Q5T8R8 295 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 MINOS1-NBL1R4GNA1 71 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 NDUFS5O43920 106 aa6.52□□□□□ -1.37
PTCHD4-201ENST00000339488 KHDC1LQ5JSQ8 128 aa6.52□□□□□ -1.37
PTCHD4-201ENST00000339488 UBR5O95071 2799 aaPredicted RBP6.52□□□□□ -1.37
PTCHD4-201ENST00000339488 C7orf65Q6ZTY9 151 aa6.52□□□□□ -1.37
PTCHD4-201ENST00000339488 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.51□□□□□ -1.37
PTCHD4-201ENST00000339488 PRR26Q8N8Z3 221 aa6.51□□□□□ -1.37
PTCHD4-201ENST00000339488 DEFB116Q30KQ4 102 aa6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 DIRC1Q969H9 104 aa6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 ATP11AUNQ6ZP68 121 aa6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 PHF5AQ7RTV0 110 aaKnown RBP6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 ADM2Q7Z4H4 148 aa6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 Q8N9P0 234 aaPredicted RBP6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 SONP18583 2426 aaKnown RBP6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 CSPG4Q6UVK1 2322 aa6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 GCN1Q92616 2671 aaKnown RBP6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 DOPEY1Q5JWR5 2465 aa6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 DNAJC9-AS1A6NH13 148 aa6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 FASNP49327 2511 aaKnown RBP6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 NF1P21359 2839 aa6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 LYRM9A8MSI8 78 aa6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 MOBPQ13875 183 aa6.48□□□□□ -1.37
PTCHD4-201ENST00000339488 ZCCHC13Q8WW36 166 aaKnown RBP6.48□□□□□ -1.37
PTCHD4-201ENST00000339488 IGHV4-31P0DP07 118 aa6.47□□□□□ -1.37
PTCHD4-201ENST00000339488 CELSR2Q9HCU4 2923 aa6.47□□□□□ -1.37
PTCHD4-201ENST00000339488 APCP25054 2843 aa6.47□□□□□ -1.37
PTCHD4-201ENST00000339488 NIPBLQ6KC79 2804 aaeCLIP6.47□□□□□ -1.37
PTCHD4-201ENST00000339488 PDE6GP18545 87 aa6.47□□□□□ -1.37
PTCHD4-201ENST00000339488 USP9YO00507 2555 aaPredicted RBP6.46□□□□□ -1.37
PTCHD4-201ENST00000339488 IGLV10-54A0A075B6I4 117 aa6.46□□□□□ -1.38
PTCHD4-201ENST00000339488 COX7BP24311 80 aa6.46□□□□□ -1.38
PTCHD4-201ENST00000339488 FN1P02751 2386 aaKnown RBP6.46□□□□□ -1.38
PTCHD4-201ENST00000339488 NBEAL2Q6ZNJ1 2754 aa6.46□□□□□ -1.38
PTCHD4-201ENST00000339488 PLA2G2AP14555 144 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 USMG5Q96IX5 58 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 TLN2Q9Y4G6 2542 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 LINC00959A0A1B0GUT2 108 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 FSHBP01225 129 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 LMO4P61968 165 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 B9D2Q9BPU9 175 aa6.44□□□□□ -1.38
PTCHD4-201ENST00000339488 CYP4F30PQ9H0H9 118 aa6.44□□□□□ -1.38
PTCHD4-201ENST00000339488 OTOGQ6ZRI0 2925 aa6.44□□□□□ -1.38
PTCHD4-201ENST00000339488 LINC00313P59037 77 aa6.44□□□□□ -1.38
PTCHD4-201ENST00000339488 CCL24O00175 119 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 NKAPP1Q8N9T2 125 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 ABCA2Q9BZC7 2435 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 IGHV4-38-2P0DP08 117 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 FBN2P35556 2912 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 H3BUX3 64 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 INSP01308 110 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 HIGD2BQ4VC39 106 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 DEFB105AQ8NG35 78 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 POLQO75417 2590 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 ABCA12Q86UK0 2595 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 PTPN13Q12923 2485 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 LCE6AA0A183 80 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 DEFB136Q30KP8 78 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 LINC00208Q96KT6 92 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 XAGE1AQ9HD64 81 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 NOP10Q9NPE3 64 aaKnown RBP6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 A0A096LPF7 62 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 TEX15Q9BXT5 2789 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 HECTD1Q9ULT8 2610 aa6.41□□□□□ -1.38
PTCHD4-201ENST00000339488 K7EQZ3 153 aa6.41□□□□□ -1.38
PTCHD4-201ENST00000339488 LIMD2Q9BT23 127 aa6.41□□□□□ -1.38
PTCHD4-201ENST00000339488 Q75L30 129 aa6.4□□□□□ -1.38
PTCHD4-201ENST00000339488 Q8IZM0 81 aa6.4□□□□□ -1.38
PTCHD4-201ENST00000339488 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
PTCHD4-201ENST00000339488 SPINK7P58062 85 aa6.39□□□□□ -1.39
PTCHD4-201ENST00000339488 UNQ6190/PRO20217Q6UXQ8 127 aa6.39□□□□□ -1.39
PTCHD4-201ENST00000339488 WFDC13Q8IUB5 93 aa6.39□□□□□ -1.39
PTCHD4-201ENST00000339488 A6NDX4 124 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 IGLV1-40P01703 118 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 IGLV6-57P01721 117 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 KIAA0087Q14695 138 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 SERTAD4-AS1Q5TG53 156 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 C18orf65Q6ZTR6 163 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 MYO9AB2RTY4 2548 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms