RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 NBPF19A0A087WUL8 3843 aa6.57□□□□□ -1.36
PTCHD4-201ENST00000339488 UBE2AP49459 152 aa6.57□□□□□ -1.36
PTCHD4-201ENST00000339488 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
PTCHD4-201ENST00000339488 IGHV4-28A0A0C4DH34 117 aa6.56□□□□□ -1.36
PTCHD4-201ENST00000339488 A6NED7 52 aa6.56□□□□□ -1.36
PTCHD4-201ENST00000339488 ST20-AS1Q8NBB2 130 aa6.55□□□□□ -1.36
PTCHD4-201ENST00000339488 TRGV2A0A075B6R0 118 aa6.55□□□□□ -1.36
PTCHD4-201ENST00000339488 TRGV1A0A0A0MS02 117 aa6.55□□□□□ -1.36
PTCHD4-201ENST00000339488 C11orf44Q8N8P7 122 aa6.55□□□□□ -1.36
PTCHD4-201ENST00000339488 C10orf99Q6UWK7 81 aa6.54□□□□□ -1.36
PTCHD4-201ENST00000339488 TENM4Q6N022 2769 aa6.54□□□□□ -1.36
PTCHD4-201ENST00000339488 CENPEQ02224 2701 aa6.54□□□□□ -1.36
PTCHD4-201ENST00000339488 IGHV3OR16-9A0A0B4J2B5 98 aa6.54□□□□□ -1.36
PTCHD4-201ENST00000339488 JMJD1CQ15652 2540 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 TRBV6-8A0A0A6YYG3 113 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 KLK9Q2XQG4 91 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 BRD3OSQ6XYD6 125 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 HELZ2Q9BYK8 2649 aaKnown RBP6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 DEFB131AP59861 70 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 C9orf66Q5T8R8 295 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 MINOS1-NBL1R4GNA1 71 aa6.53□□□□□ -1.36
PTCHD4-201ENST00000339488 NDUFS5O43920 106 aa6.52□□□□□ -1.37
PTCHD4-201ENST00000339488 KHDC1LQ5JSQ8 128 aa6.52□□□□□ -1.37
PTCHD4-201ENST00000339488 UBR5O95071 2799 aaPredicted RBP6.52□□□□□ -1.37
PTCHD4-201ENST00000339488 C7orf65Q6ZTY9 151 aa6.52□□□□□ -1.37
PTCHD4-201ENST00000339488 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.51□□□□□ -1.37
PTCHD4-201ENST00000339488 PRR26Q8N8Z3 221 aa6.51□□□□□ -1.37
PTCHD4-201ENST00000339488 DEFB116Q30KQ4 102 aa6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 DIRC1Q969H9 104 aa6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 ATP11AUNQ6ZP68 121 aa6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 PHF5AQ7RTV0 110 aaKnown RBP6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 ADM2Q7Z4H4 148 aa6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 Q8N9P0 234 aaPredicted RBP6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 SONP18583 2426 aaKnown RBP6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 CSPG4Q6UVK1 2322 aa6.5□□□□□ -1.37
PTCHD4-201ENST00000339488 GCN1Q92616 2671 aaKnown RBP6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 DOPEY1Q5JWR5 2465 aa6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 DNAJC9-AS1A6NH13 148 aa6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 FASNP49327 2511 aaKnown RBP6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 NF1P21359 2839 aa6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 LYRM9A8MSI8 78 aa6.49□□□□□ -1.37
PTCHD4-201ENST00000339488 MOBPQ13875 183 aa6.48□□□□□ -1.37
PTCHD4-201ENST00000339488 ZCCHC13Q8WW36 166 aaKnown RBP6.48□□□□□ -1.37
PTCHD4-201ENST00000339488 IGHV4-31P0DP07 118 aa6.47□□□□□ -1.37
PTCHD4-201ENST00000339488 CELSR2Q9HCU4 2923 aa6.47□□□□□ -1.37
PTCHD4-201ENST00000339488 APCP25054 2843 aa6.47□□□□□ -1.37
PTCHD4-201ENST00000339488 NIPBLQ6KC79 2804 aaeCLIP6.47□□□□□ -1.37
PTCHD4-201ENST00000339488 PDE6GP18545 87 aa6.47□□□□□ -1.37
PTCHD4-201ENST00000339488 USP9YO00507 2555 aaPredicted RBP6.46□□□□□ -1.37
PTCHD4-201ENST00000339488 IGLV10-54A0A075B6I4 117 aa6.46□□□□□ -1.38
PTCHD4-201ENST00000339488 COX7BP24311 80 aa6.46□□□□□ -1.38
PTCHD4-201ENST00000339488 FN1P02751 2386 aaKnown RBP6.46□□□□□ -1.38
PTCHD4-201ENST00000339488 NBEAL2Q6ZNJ1 2754 aa6.46□□□□□ -1.38
PTCHD4-201ENST00000339488 PLA2G2AP14555 144 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 USMG5Q96IX5 58 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 TLN2Q9Y4G6 2542 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 LINC00959A0A1B0GUT2 108 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 FSHBP01225 129 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 LMO4P61968 165 aa6.45□□□□□ -1.38
PTCHD4-201ENST00000339488 B9D2Q9BPU9 175 aa6.44□□□□□ -1.38
PTCHD4-201ENST00000339488 CYP4F30PQ9H0H9 118 aa6.44□□□□□ -1.38
PTCHD4-201ENST00000339488 OTOGQ6ZRI0 2925 aa6.44□□□□□ -1.38
PTCHD4-201ENST00000339488 LINC00313P59037 77 aa6.44□□□□□ -1.38
PTCHD4-201ENST00000339488 CCL24O00175 119 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 NKAPP1Q8N9T2 125 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 ABCA2Q9BZC7 2435 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 IGHV4-38-2P0DP08 117 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 FBN2P35556 2912 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 H3BUX3 64 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 INSP01308 110 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 HIGD2BQ4VC39 106 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 DEFB105AQ8NG35 78 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 POLQO75417 2590 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 ABCA12Q86UK0 2595 aa6.43□□□□□ -1.38
PTCHD4-201ENST00000339488 PTPN13Q12923 2485 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 LCE6AA0A183 80 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 DEFB136Q30KP8 78 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 LINC00208Q96KT6 92 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 XAGE1AQ9HD64 81 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 NOP10Q9NPE3 64 aaKnown RBP6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 A0A096LPF7 62 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 TEX15Q9BXT5 2789 aa6.42□□□□□ -1.38
PTCHD4-201ENST00000339488 HECTD1Q9ULT8 2610 aa6.41□□□□□ -1.38
PTCHD4-201ENST00000339488 K7EQZ3 153 aa6.41□□□□□ -1.38
PTCHD4-201ENST00000339488 LIMD2Q9BT23 127 aa6.41□□□□□ -1.38
PTCHD4-201ENST00000339488 Q75L30 129 aa6.4□□□□□ -1.38
PTCHD4-201ENST00000339488 Q8IZM0 81 aa6.4□□□□□ -1.38
PTCHD4-201ENST00000339488 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
PTCHD4-201ENST00000339488 SPINK7P58062 85 aa6.39□□□□□ -1.39
PTCHD4-201ENST00000339488 UNQ6190/PRO20217Q6UXQ8 127 aa6.39□□□□□ -1.39
PTCHD4-201ENST00000339488 WFDC13Q8IUB5 93 aa6.39□□□□□ -1.39
PTCHD4-201ENST00000339488 A6NDX4 124 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 IGLV1-40P01703 118 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 IGLV6-57P01721 117 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 KIAA0087Q14695 138 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 SERTAD4-AS1Q5TG53 156 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 C18orf65Q6ZTR6 163 aa6.38□□□□□ -1.39
PTCHD4-201ENST00000339488 MYO9AB2RTY4 2548 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms