RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 EGFEM1PQ0D2K5 195 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 NBEAL2Q6ZNJ1 2754 aa3.62□□□□□ -1.83
VPS50-202ENST00000305866 SPTBN4Q9H254 2564 aa3.61□□□□□ -1.83
VPS50-202ENST00000305866 UNC79Q9P2D8 2635 aa3.61□□□□□ -1.83
VPS50-202ENST00000305866 TRGV2A0A075B6R0 118 aa3.61□□□□□ -1.83
VPS50-202ENST00000305866 HTN1P15515 57 aa3.61□□□□□ -1.83
VPS50-202ENST00000305866 EPG5Q9HCE0 2579 aa3.61□□□□□ -1.83
VPS50-202ENST00000305866 NOTCH3Q9UM47 2321 aa3.61□□□□□ -1.83
VPS50-202ENST00000305866 JMJD7-PLA2G4BH0Y9G9 81 aa3.61□□□□□ -1.83
VPS50-202ENST00000305866 APOC4P55056 127 aa3.61□□□□□ -1.83
VPS50-202ENST00000305866 ORMDL1Q9P0S3 153 aa3.61□□□□□ -1.83
VPS50-202ENST00000305866 PLA2G2DQ9UNK4 145 aa3.61□□□□□ -1.83
VPS50-202ENST00000305866 GCN1Q92616 2671 aaKnown RBP3.6□□□□□ -1.83
VPS50-202ENST00000305866 GYPEP15421 78 aa3.6□□□□□ -1.83
VPS50-202ENST00000305866 C9orf116Q5BN46 136 aaPredicted RBP3.6□□□□□ -1.83
VPS50-202ENST00000305866 CSPG4Q6UVK1 2322 aa3.6□□□□□ -1.83
VPS50-202ENST00000305866 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
VPS50-202ENST00000305866 PIEZO1Q92508 2521 aa3.59□□□□□ -1.83
VPS50-202ENST00000305866 KRTAP4-16G5E9R7 235 aaPredicted RBP3.59□□□□□ -1.83
VPS50-202ENST00000305866 XCL1P47992 114 aa3.59□□□□□ -1.83
VPS50-202ENST00000305866 COL7A1Q02388 2944 aa3.59□□□□□ -1.83
VPS50-202ENST00000305866 IGLV5-37A0A075B6J1 123 aa3.59□□□□□ -1.84
VPS50-202ENST00000305866 TMEM256-PLSCR3K7ERE1 68 aa3.59□□□□□ -1.84
VPS50-202ENST00000305866 TLX1NBP0CAT3 122 aa3.59□□□□□ -1.84
VPS50-202ENST00000305866 ENHOQ6UWT2 76 aa3.59□□□□□ -1.84
VPS50-202ENST00000305866 PLECQ15149 4684 aaKnown RBP3.58□□□□□ -1.84
VPS50-202ENST00000305866 J3QKU1 62 aa3.58□□□□□ -1.84
VPS50-202ENST00000305866 CXCL6P80162 114 aa3.58□□□□□ -1.84
VPS50-202ENST00000305866 TNP2Q05952 138 aa3.58□□□□□ -1.84
VPS50-202ENST00000305866 FAM229BQ4G0N7 80 aa3.58□□□□□ -1.84
VPS50-202ENST00000305866 CHCHD10Q8WYQ3 142 aaPredicted RBP3.58□□□□□ -1.84
VPS50-202ENST00000305866 A0A096LPF7 62 aa3.58□□□□□ -1.84
VPS50-202ENST00000305866 Q6ZTC4 211 aa3.58□□□□□ -1.84
VPS50-202ENST00000305866 Q6ZVQ6 151 aa3.58□□□□□ -1.84
VPS50-202ENST00000305866 OCR1Q9BZK8 76 aa3.58□□□□□ -1.84
VPS50-202ENST00000305866 A0A1B0GW54 56 aa3.58□□□□□ -1.84
VPS50-202ENST00000305866 RPL35AP18077 110 aaKnown RBP3.58□□□□□ -1.84
VPS50-202ENST00000305866 REG3AQ06141 175 aa3.58□□□□□ -1.84
VPS50-202ENST00000305866 PDE6GP18545 87 aa3.57□□□□□ -1.84
VPS50-202ENST00000305866 ZCCHC13Q8WW36 166 aaKnown RBP3.57□□□□□ -1.84
VPS50-202ENST00000305866 POLQO75417 2590 aa3.57□□□□□ -1.84
VPS50-202ENST00000305866 IGKV4-1P06312 121 aa3.57□□□□□ -1.84
VPS50-202ENST00000305866 ELOF1P60002 83 aaKnown RBP3.57□□□□□ -1.84
VPS50-202ENST00000305866 KHDC1LQ5JSQ8 128 aa3.57□□□□□ -1.84
VPS50-202ENST00000305866 TRAV7A0A075B6U4 112 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 ZNF561-AS1K7EIQ3 104 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 LINC00158P58513 81 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 NBASA2RRP1 2371 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 A0A0U1RQV1 116 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 VPREB1P12018 145 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 S100A7L2Q5SY68 101 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 TM2D3Q9BRN9 247 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 C6orf48Q9UBA6 75 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 KMT2AQ03164 3969 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 ERC2-IT1O76042 136 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 GHRHP01286 108 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 SPART-AS1P0CW21 52 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 PFN2P35080 140 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 C6orf99Q4VX62 202 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 C6orf226Q5I0X4 101 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 LINC00528Q8N1L1 170 aa3.56□□□□□ -1.84
VPS50-202ENST00000305866 LINC00336Q6ZUF6 198 aa3.55□□□□□ -1.84
VPS50-202ENST00000305866 LINC00269Q8N2A0 174 aa3.55□□□□□ -1.84
VPS50-202ENST00000305866 TENM3Q9P273 2699 aa3.55□□□□□ -1.84
VPS50-202ENST00000305866 TRAV23DV6A0A075B6W5 121 aa3.55□□□□□ -1.84
VPS50-202ENST00000305866 DNAL4O96015 105 aa3.55□□□□□ -1.84
VPS50-202ENST00000305866 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.55□□□□□ -1.84
VPS50-202ENST00000305866 JMJD1CQ15652 2540 aa3.55□□□□□ -1.84
VPS50-202ENST00000305866 FLNAP21333 2647 aaKnown RBP3.55□□□□□ -1.84
VPS50-202ENST00000305866 SPRR1AP35321 89 aa3.55□□□□□ -1.84
VPS50-202ENST00000305866 LRRK2Q5S007 2527 aa3.54□□□□□ -1.84
VPS50-202ENST00000305866 LINC01556Q5JQF7 62 aa3.54□□□□□ -1.84
VPS50-202ENST00000305866 UNQ6190/PRO20217Q6UXQ8 127 aa3.54□□□□□ -1.84
VPS50-202ENST00000305866 C15orf56Q8N910 161 aa3.54□□□□□ -1.84
VPS50-202ENST00000305866 SERP1Q9Y6X1 66 aa3.54□□□□□ -1.84
VPS50-202ENST00000305866 PKD1P98161 4303 aa3.54□□□□□ -1.84
VPS50-202ENST00000305866 ITPR2Q14571 2701 aa3.53□□□□□ -1.84
VPS50-202ENST00000305866 IGLV5-48A0A075B6I7 105 aa3.53□□□□□ -1.84
VPS50-202ENST00000305866 DNAH10OSP0CZ25 163 aa3.53□□□□□ -1.84
VPS50-202ENST00000305866 HRCT1Q6UXD1 115 aa3.53□□□□□ -1.84
VPS50-202ENST00000305866 RMI2Q96E14 147 aa3.53□□□□□ -1.84
VPS50-202ENST00000305866 KCNQ1DNQ9H478 68 aa3.53□□□□□ -1.84
VPS50-202ENST00000305866 CYSRT1A8MQ03 144 aa3.53□□□□□ -1.84
VPS50-202ENST00000305866 STARD9Q9P2P6 4700 aa3.53□□□□□ -1.84
VPS50-202ENST00000305866 DAD1P61803 113 aa3.52□□□□□ -1.85
VPS50-202ENST00000305866 DNAH11Q96DT5 4516 aa3.52□□□□□ -1.85
VPS50-202ENST00000305866 DEFB130BP0DP73 79 aa3.52□□□□□ -1.85
VPS50-202ENST00000305866 DEFB130AP0DP74 79 aa3.52□□□□□ -1.85
VPS50-202ENST00000305866 LINC00474Q9P2X8 69 aa3.52□□□□□ -1.85
VPS50-202ENST00000305866 SPAG11BQ08648 103 aa3.52□□□□□ -1.85
VPS50-202ENST00000305866 TOMM7Q9P0U1 55 aa3.52□□□□□ -1.85
VPS50-202ENST00000305866 TLN2Q9Y4G6 2542 aa3.52□□□□□ -1.85
VPS50-202ENST00000305866 M0R378 163 aa3.51□□□□□ -1.85
VPS50-202ENST00000305866 KRTAP10-11P60412 298 aa3.51□□□□□ -1.85
VPS50-202ENST00000305866 KPRPQ5T749 579 aaPredicted RBP3.51□□□□□ -1.85
VPS50-202ENST00000305866 SRRM2Q9UQ35 2752 aaKnown RBP3.51□□□□□ -1.85
VPS50-202ENST00000305866 FAM236DA0A1B0GTK5 79 aa3.51□□□□□ -1.85
VPS50-202ENST00000305866 FAM236CP0DP71 79 aa3.51□□□□□ -1.85
VPS50-202ENST00000305866 RBM3P98179 157 aaKnown RBP3.5□□□□□ -1.85
VPS50-202ENST00000305866 C20orf197Q8N268 126 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms