RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 PPDPFQ9H3Y8 114 aa5.68□□□□□ -1.5
SNRPD1-201ENST00000300413 LST1O00453 97 aa5.67□□□□□ -1.5
SNRPD1-201ENST00000300413 REG3GQ6UW15 175 aa5.67□□□□□ -1.5
SNRPD1-201ENST00000300413 SS18L2Q9UHA2 77 aa5.67□□□□□ -1.5
SNRPD1-201ENST00000300413 IGKV2-28A0A075B6P5 120 aa5.67□□□□□ -1.5
SNRPD1-201ENST00000300413 IGKV2D-28P01615 120 aa5.67□□□□□ -1.5
SNRPD1-201ENST00000300413 PCP4P48539 62 aa5.67□□□□□ -1.5
SNRPD1-201ENST00000300413 MRPL55Q7Z7F7 128 aaKnown RBP5.66□□□□□ -1.5
SNRPD1-201ENST00000300413 PRR34Q9NV39 138 aa5.66□□□□□ -1.5
SNRPD1-201ENST00000300413 COL6A5A8TX70 2615 aa5.66□□□□□ -1.5
SNRPD1-201ENST00000300413 ENHOQ6UWT2 76 aa5.66□□□□□ -1.5
SNRPD1-201ENST00000300413 DCHS1Q96JQ0 3298 aa5.66□□□□□ -1.5
SNRPD1-201ENST00000300413 LRBAP50851 2863 aa5.66□□□□□ -1.5
SNRPD1-201ENST00000300413 ITPR2Q14571 2701 aa5.66□□□□□ -1.5
SNRPD1-201ENST00000300413 UBR5O95071 2799 aaPredicted RBP5.65□□□□□ -1.51
SNRPD1-201ENST00000300413 TRBV10-3A0A0K0K1G6 114 aa5.65□□□□□ -1.51
SNRPD1-201ENST00000300413 C9orf116Q5BN46 136 aaPredicted RBP5.65□□□□□ -1.51
SNRPD1-201ENST00000300413 Q9UF83 564 aa5.64□□□□□ -1.51
SNRPD1-201ENST00000300413 ASPMQ8IZT6 3477 aa5.64□□□□□ -1.51
SNRPD1-201ENST00000300413 ATP5EP2Q5VTU8 51 aa5.64□□□□□ -1.51
SNRPD1-201ENST00000300413 Q6ZQY7 126 aa5.64□□□□□ -1.51
SNRPD1-201ENST00000300413 WDFY3Q8IZQ1 3526 aa5.64□□□□□ -1.51
SNRPD1-201ENST00000300413 ANAPC13Q9BS18 74 aa5.64□□□□□ -1.51
SNRPD1-201ENST00000300413 KRTAP21-3Q3LHN1 58 aa5.63□□□□□ -1.51
SNRPD1-201ENST00000300413 TRBV7-6A0A0J9YX20 115 aa5.63□□□□□ -1.51
SNRPD1-201ENST00000300413 WFDC2Q14508 124 aa5.63□□□□□ -1.51
SNRPD1-201ENST00000300413 ADAMTSL4-AS1Q5T5F5 129 aa5.63□□□□□ -1.51
SNRPD1-201ENST00000300413 ITPR1Q14643 2758 aa5.63□□□□□ -1.51
SNRPD1-201ENST00000300413 RPL37AP8A6NKH3 93 aa5.63□□□□□ -1.51
SNRPD1-201ENST00000300413 DMDP11532 3685 aa5.62□□□□□ -1.51
SNRPD1-201ENST00000300413 BAHCC1Q9P281 2608 aa5.62□□□□□ -1.51
SNRPD1-201ENST00000300413 C6orf48Q9UBA6 75 aa5.62□□□□□ -1.51
SNRPD1-201ENST00000300413 NBEAL1Q6ZS30 2694 aa5.62□□□□□ -1.51
SNRPD1-201ENST00000300413 Q6JHZ5 121 aa5.62□□□□□ -1.51
SNRPD1-201ENST00000300413 APLNQ9ULZ1 77 aa5.62□□□□□ -1.51
SNRPD1-201ENST00000300413 C16orf90A8MZG2 172 aa5.62□□□□□ -1.51
SNRPD1-201ENST00000300413 NOTCH1P46531 2555 aa5.61□□□□□ -1.51
SNRPD1-201ENST00000300413 LAMA5O15230 3695 aa5.61□□□□□ -1.51
SNRPD1-201ENST00000300413 SMIM20Q8N5G0 67 aa5.61□□□□□ -1.51
SNRPD1-201ENST00000300413 TEX49A0A1B0GTD5 131 aa5.6□□□□□ -1.51
SNRPD1-201ENST00000300413 LINC00643Q86TS7 51 aa5.6□□□□□ -1.51
SNRPD1-201ENST00000300413 Q8N814 137 aa5.6□□□□□ -1.51
SNRPD1-201ENST00000300413 C22orf24Q9Y442 160 aa5.6□□□□□ -1.51
SNRPD1-201ENST00000300413 LINC00336Q6ZUF6 198 aa5.6□□□□□ -1.51
SNRPD1-201ENST00000300413 RTL8CO15255 209 aa5.6□□□□□ -1.51
SNRPD1-201ENST00000300413 C14orf132Q9NPU4 83 aa5.59□□□□□ -1.51
SNRPD1-201ENST00000300413 C10orf25Q5T742 122 aa5.59□□□□□ -1.51
SNRPD1-201ENST00000300413 NDUFV3P56181 108 aaKnown RBP5.59□□□□□ -1.51
SNRPD1-201ENST00000300413 LRCOL1A6NCL2 159 aa5.59□□□□□ -1.52
SNRPD1-201ENST00000300413 BPY2O14599 106 aa5.58□□□□□ -1.52
SNRPD1-201ENST00000300413 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
SNRPD1-201ENST00000300413 ZANQ9Y493 2812 aa5.58□□□□□ -1.52
SNRPD1-201ENST00000300413 CRYBG3Q68DQ2 2970 aa5.57□□□□□ -1.52
SNRPD1-201ENST00000300413 CCKP06307 115 aa5.57□□□□□ -1.52
SNRPD1-201ENST00000300413 SLPIP03973 132 aa5.57□□□□□ -1.52
SNRPD1-201ENST00000300413 LINC00575Q6W349 94 aa5.57□□□□□ -1.52
SNRPD1-201ENST00000300413 RELNP78509 3460 aa5.57□□□□□ -1.52
SNRPD1-201ENST00000300413 TLX1NBP0CAT3 122 aa5.56□□□□□ -1.52
SNRPD1-201ENST00000300413 LINC00337Q8N6G1 96 aa5.56□□□□□ -1.52
SNRPD1-201ENST00000300413 B5MCH6 92 aa5.56□□□□□ -1.52
SNRPD1-201ENST00000300413 Q8N3U1 123 aa5.55□□□□□ -1.52
SNRPD1-201ENST00000300413 ATOX1O00244 68 aa5.55□□□□□ -1.52
SNRPD1-201ENST00000300413 NDUFS5O43920 106 aa5.55□□□□□ -1.52
SNRPD1-201ENST00000300413 LINC00167Q96N53 147 aa5.55□□□□□ -1.52
SNRPD1-201ENST00000300413 MP68P56378 58 aa5.55□□□□□ -1.52
SNRPD1-201ENST00000300413 H0Y9J4 135 aa5.54□□□□□ -1.52
SNRPD1-201ENST00000300413 Q6ZRP5 223 aa5.54□□□□□ -1.52
SNRPD1-201ENST00000300413 ZNF575Q86XF7 245 aa5.54□□□□□ -1.52
SNRPD1-201ENST00000300413 FAM240AA0A1B0GVK7 77 aa5.54□□□□□ -1.52
SNRPD1-201ENST00000300413 PRR3P79522 188 aaKnown RBP5.54□□□□□ -1.52
SNRPD1-201ENST00000300413 PLA2G2DQ9UNK4 145 aa5.54□□□□□ -1.52
SNRPD1-201ENST00000300413 A0A1B0GW54 56 aa5.54□□□□□ -1.52
SNRPD1-201ENST00000300413 CNBPP62633 177 aaKnown RBP5.53□□□□□ -1.52
SNRPD1-201ENST00000300413 UTP20O75691 2785 aaKnown RBP5.53□□□□□ -1.52
SNRPD1-201ENST00000300413 A0A087WTM6 91 aa5.53□□□□□ -1.52
SNRPD1-201ENST00000300413 FAM229AH3BQW9 127 aa5.53□□□□□ -1.52
SNRPD1-201ENST00000300413 KIAA0087Q14695 138 aa5.53□□□□□ -1.52
SNRPD1-201ENST00000300413 A0A096LNI7 61 aa5.52□□□□□ -1.53
SNRPD1-201ENST00000300413 C15orf56Q8N910 161 aa5.52□□□□□ -1.53
SNRPD1-201ENST00000300413 C9orf163Q8N9P6 203 aa5.52□□□□□ -1.53
SNRPD1-201ENST00000300413 Q9BRP9 147 aa5.52□□□□□ -1.53
SNRPD1-201ENST00000300413 ELOF1P60002 83 aaKnown RBP5.52□□□□□ -1.53
SNRPD1-201ENST00000300413 SMCR5Q8TEV8 140 aa5.51□□□□□ -1.53
SNRPD1-201ENST00000300413 LIMD2Q9BT23 127 aa5.51□□□□□ -1.53
SNRPD1-201ENST00000300413 IGLV9-49A0A0B4J1Y8 123 aa5.51□□□□□ -1.53
SNRPD1-201ENST00000300413 LINC00476Q8WZB0 136 aa5.51□□□□□ -1.53
SNRPD1-201ENST00000300413 A0A087WYN8 130 aa5.51□□□□□ -1.53
SNRPD1-201ENST00000300413 IGKV3D-7A0A0C4DH55 119 aa5.51□□□□□ -1.53
SNRPD1-201ENST00000300413 VPREB1P12018 145 aa5.51□□□□□ -1.53
SNRPD1-201ENST00000300413 J3KT08 172 aa5.51□□□□□ -1.53
SNRPD1-201ENST00000300413 LITAFQ99732 161 aa5.51□□□□□ -1.53
SNRPD1-201ENST00000300413 IMUPQ9GZP8 106 aa5.51□□□□□ -1.53
SNRPD1-201ENST00000300413 SOSTDC1Q6X4U4 206 aa5.5□□□□□ -1.53
SNRPD1-201ENST00000300413 BCE1O60756 84 aa5.5□□□□□ -1.53
SNRPD1-201ENST00000300413 ASH1LQ9NR48 2969 aaKnown RBP5.5□□□□□ -1.53
SNRPD1-201ENST00000300413 Q6ZRX8 168 aa5.5□□□□□ -1.53
SNRPD1-201ENST00000300413 PLA2G1BP04054 148 aaKnown RBP5.49□□□□□ -1.53
SNRPD1-201ENST00000300413 IGLV6-57P01721 117 aa5.49□□□□□ -1.53
SNRPD1-201ENST00000300413 PRLHP81277 87 aa5.48□□□□□ -1.53
SNRPD1-201ENST00000300413 KCNQ1DNQ9H478 68 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms