RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 TEP1Q99973 2627 aaKnown RBP8.73□□□□□ -1.01
FOXN3-201ENST00000261302 NSD1Q96L73 2696 aaPredicted RBP8.72□□□□□ -1.01
FOXN3-201ENST00000261302 ZFHX3Q15911 3703 aa8.71□□□□□ -1.01
FOXN3-201ENST00000261302 HIVEP2P31629 2446 aa8.71□□□□□ -1.01
FOXN3-201ENST00000261302 UBE2L6O14933 153 aa8.71□□□□□ -1.02
FOXN3-201ENST00000261302 FN1P02751 2386 aaKnown RBP8.71□□□□□ -1.02
FOXN3-201ENST00000261302 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
FOXN3-201ENST00000261302 MUC7Q8TAX7 377 aa8.7□□□□□ -1.02
FOXN3-201ENST00000261302 CSPG4Q6UVK1 2322 aa8.7□□□□□ -1.02
FOXN3-201ENST00000261302 H3BQ85 93 aa8.7□□□□□ -1.02
FOXN3-201ENST00000261302 C6orf99Q4VX62 202 aa8.7□□□□□ -1.02
FOXN3-201ENST00000261302 SVEP1Q4LDE5 3571 aa8.69□□□□□ -1.02
FOXN3-201ENST00000261302 PRR3P79522 188 aaKnown RBP8.69□□□□□ -1.02
FOXN3-201ENST00000261302 TMEM89A2RUT3 159 aa8.69□□□□□ -1.02
FOXN3-201ENST00000261302 KRTAP21-3Q3LHN1 58 aa8.69□□□□□ -1.02
FOXN3-201ENST00000261302 CD164L2Q6UWJ8 174 aa8.69□□□□□ -1.02
FOXN3-201ENST00000261302 SPATA3Q8NHX4 192 aa8.69□□□□□ -1.02
FOXN3-201ENST00000261302 NF1P21359 2839 aa8.68□□□□□ -1.02
FOXN3-201ENST00000261302 MRPL55Q7Z7F7 128 aaKnown RBP8.67□□□□□ -1.02
FOXN3-201ENST00000261302 HIGD2AQ9BW72 106 aa8.67□□□□□ -1.02
FOXN3-201ENST00000261302 CUBNO60494 3623 aa8.67□□□□□ -1.02
FOXN3-201ENST00000261302 MTORP42345 2549 aa8.66□□□□□ -1.02
FOXN3-201ENST00000261302 TLN2Q9Y4G6 2542 aa8.66□□□□□ -1.02
FOXN3-201ENST00000261302 SORL1Q92673 2214 aa8.65□□□□□ -1.02
FOXN3-201ENST00000261302 IGKV4-1P06312 121 aa8.65□□□□□ -1.02
FOXN3-201ENST00000261302 TRAV22A0A0B4J277 110 aa8.64□□□□□ -1.03
FOXN3-201ENST00000261302 DEFB131AP59861 70 aa8.64□□□□□ -1.03
FOXN3-201ENST00000261302 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
FOXN3-201ENST00000261302 IGKV3OR2-268A0A0C4DH90 116 aa8.64□□□□□ -1.03
FOXN3-201ENST00000261302 NIPBLQ6KC79 2804 aaeCLIP8.64□□□□□ -1.03
FOXN3-201ENST00000261302 A6NDX4 124 aa8.63□□□□□ -1.03
FOXN3-201ENST00000261302 LY6EQ16553 131 aa8.63□□□□□ -1.03
FOXN3-201ENST00000261302 Q8IZM0 81 aa8.63□□□□□ -1.03
FOXN3-201ENST00000261302 PSPHP1O15172 72 aa8.63□□□□□ -1.03
FOXN3-201ENST00000261302 BRD3OSQ6XYD6 125 aa8.63□□□□□ -1.03
FOXN3-201ENST00000261302 IGLV4-60A0A075B6I1 120 aa8.62□□□□□ -1.03
FOXN3-201ENST00000261302 SONP18583 2426 aaKnown RBP8.62□□□□□ -1.03
FOXN3-201ENST00000261302 LCE6AA0A183 80 aa8.62□□□□□ -1.03
FOXN3-201ENST00000261302 LRCOL1A6NCL2 159 aa8.62□□□□□ -1.03
FOXN3-201ENST00000261302 INSP01308 110 aa8.62□□□□□ -1.03
FOXN3-201ENST00000261302 COX17Q14061 63 aa8.61□□□□□ -1.03
FOXN3-201ENST00000261302 Q6ZQY7 126 aa8.61□□□□□ -1.03
FOXN3-201ENST00000261302 KTN1-AS1Q86SY8 53 aa8.61□□□□□ -1.03
FOXN3-201ENST00000261302 TRGV1A0A0A0MS02 117 aa8.61□□□□□ -1.03
FOXN3-201ENST00000261302 LYRM9A8MSI8 78 aa8.6□□□□□ -1.03
FOXN3-201ENST00000261302 DEFB112Q30KQ8 113 aa8.6□□□□□ -1.03
FOXN3-201ENST00000261302 RBM12B-AS1Q9P1G2 102 aa8.6□□□□□ -1.03
FOXN3-201ENST00000261302 Q6YL49 198 aa8.6□□□□□ -1.03
FOXN3-201ENST00000261302 SETD2Q9BYW2 2564 aaPredicted RBP8.6□□□□□ -1.03
FOXN3-201ENST00000261302 H3BUX3 64 aa8.59□□□□□ -1.03
FOXN3-201ENST00000261302 Q8N9L7 120 aa8.59□□□□□ -1.03
FOXN3-201ENST00000261302 LINC01006Q8NI28 216 aa8.59□□□□□ -1.03
FOXN3-201ENST00000261302 ESM1Q9NQ30 184 aa8.59□□□□□ -1.03
FOXN3-201ENST00000261302 MXRA5Q9NR99 2828 aa8.59□□□□□ -1.03
FOXN3-201ENST00000261302 LINC00959A0A1B0GUT2 108 aa8.59□□□□□ -1.03
FOXN3-201ENST00000261302 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
FOXN3-201ENST00000261302 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
FOXN3-201ENST00000261302 DNAJC9-AS1A6NH13 148 aa8.58□□□□□ -1.04
FOXN3-201ENST00000261302 UBE2BP63146 152 aa8.58□□□□□ -1.04
FOXN3-201ENST00000261302 COX7BP24311 80 aa8.57□□□□□ -1.04
FOXN3-201ENST00000261302 KRTAP24-1Q3LI83 254 aa8.57□□□□□ -1.04
FOXN3-201ENST00000261302 Q8NDZ9 215 aa8.57□□□□□ -1.04
FOXN3-201ENST00000261302 CYP4F30PQ9H0H9 118 aa8.57□□□□□ -1.04
FOXN3-201ENST00000261302 ZCCHC13Q8WW36 166 aaKnown RBP8.57□□□□□ -1.04
FOXN3-201ENST00000261302 C2CD3Q4AC94 2353 aa8.57□□□□□ -1.04
FOXN3-201ENST00000261302 PSCAO43653 123 aa8.55□□□□□ -1.04
FOXN3-201ENST00000261302 DEFB114Q30KQ6 69 aa8.55□□□□□ -1.04
FOXN3-201ENST00000261302 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.55□□□□□ -1.04
FOXN3-201ENST00000261302 MDFIQ99750 246 aa8.55□□□□□ -1.04
FOXN3-201ENST00000261302 TRBV6-8A0A0A6YYG3 113 aa8.55□□□□□ -1.04
FOXN3-201ENST00000261302 TRGV2A0A075B6R0 118 aa8.54□□□□□ -1.04
FOXN3-201ENST00000261302 IGHV4-28A0A0C4DH34 117 aa8.54□□□□□ -1.04
FOXN3-201ENST00000261302 A8MUN3 132 aa8.54□□□□□ -1.04
FOXN3-201ENST00000261302 IGLV6-57P01721 117 aa8.54□□□□□ -1.04
FOXN3-201ENST00000261302 LINC00612Q8N6U2 182 aa8.54□□□□□ -1.04
FOXN3-201ENST00000261302 A8MU10 97 aa8.54□□□□□ -1.04
FOXN3-201ENST00000261302 IGHV4-59P01825 116 aa8.54□□□□□ -1.04
FOXN3-201ENST00000261302 Q5VV11 94 aa8.53□□□□□ -1.04
FOXN3-201ENST00000261302 C10orf99Q6UWK7 81 aa8.53□□□□□ -1.04
FOXN3-201ENST00000261302 MAP6D1Q9H9H5 199 aa8.53□□□□□ -1.04
FOXN3-201ENST00000261302 FBN1P35555 2871 aaKnown RBP8.53□□□□□ -1.04
FOXN3-201ENST00000261302 LOC100131303A0A0U1RQF7 123 aa8.53□□□□□ -1.04
FOXN3-201ENST00000261302 KIAA0087Q14695 138 aa8.53□□□□□ -1.04
FOXN3-201ENST00000261302 M0R378 163 aa8.52□□□□□ -1.04
FOXN3-201ENST00000261302 FAM30AQ9NZY2 134 aa8.51□□□□□ -1.05
FOXN3-201ENST00000261302 TRGV4A0A0C4DH28 118 aa8.5□□□□□ -1.05
FOXN3-201ENST00000261302 CCL24O00175 119 aa8.5□□□□□ -1.05
FOXN3-201ENST00000261302 UBE2AP49459 152 aa8.5□□□□□ -1.05
FOXN3-201ENST00000261302 NDUFS5O43920 106 aa8.5□□□□□ -1.05
FOXN3-201ENST00000261302 SMIM29Q86T20 159 aa8.5□□□□□ -1.05
FOXN3-201ENST00000261302 LINC00269Q8N2A0 174 aa8.49□□□□□ -1.05
FOXN3-201ENST00000261302 CELA1Q9UNI1 258 aa8.49□□□□□ -1.05
FOXN3-201ENST00000261302 JMJD1CQ15652 2540 aa8.49□□□□□ -1.05
FOXN3-201ENST00000261302 C16orf90A8MZG2 172 aa8.49□□□□□ -1.05
FOXN3-201ENST00000261302 IGHV4-30-4P0DP06 118 aa8.49□□□□□ -1.05
FOXN3-201ENST00000261302 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
FOXN3-201ENST00000261302 STHQ8IWL8 128 aa8.48□□□□□ -1.05
FOXN3-201ENST00000261302 DIRC1Q969H9 104 aa8.48□□□□□ -1.05
FOXN3-201ENST00000261302 C9orf116Q5BN46 136 aaPredicted RBP8.48□□□□□ -1.05
FOXN3-201ENST00000261302 C10orf25Q5T742 122 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms