RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TET2Q6N021 2002 aaPredicted RBP7.24□□□□□ -1.25
VCL-201ENST00000211998 Q6ZRU5 148 aa7.24□□□□□ -1.25
VCL-201ENST00000211998 CIRBP-AS1Q8TBR5 109 aa7.23□□□□□ -1.25
VCL-201ENST00000211998 TP53AIP1Q9HCN2 124 aa7.23□□□□□ -1.25
VCL-201ENST00000211998 TRAV22A0A0B4J277 110 aa7.23□□□□□ -1.25
VCL-201ENST00000211998 PTPRSQ13332 1948 aa7.22□□□□□ -1.25
VCL-201ENST00000211998 A0A1B0GW54 56 aa7.22□□□□□ -1.25
VCL-201ENST00000211998 C7orf65Q6ZTY9 151 aa7.22□□□□□ -1.25
VCL-201ENST00000211998 CCDC168Q8NDH2 2452 aa7.22□□□□□ -1.25
VCL-201ENST00000211998 LYPD5Q6UWN5 251 aa7.22□□□□□ -1.25
VCL-201ENST00000211998 C6orf48Q9UBA6 75 aa7.22□□□□□ -1.25
VCL-201ENST00000211998 ELOF1P60002 83 aaKnown RBP7.21□□□□□ -1.25
VCL-201ENST00000211998 RAI1Q7Z5J4 1906 aaPredicted RBP7.21□□□□□ -1.26
VCL-201ENST00000211998 PRLHP81277 87 aa7.21□□□□□ -1.26
VCL-201ENST00000211998 SPINT4Q6UDR6 99 aa7.21□□□□□ -1.26
VCL-201ENST00000211998 LCA10Q71F78 164 aa7.21□□□□□ -1.26
VCL-201ENST00000211998 C1orf134Q5TEV5 83 aa7.2□□□□□ -1.26
VCL-201ENST00000211998 MYO18BQ8IUG5 2567 aa7.2□□□□□ -1.26
VCL-201ENST00000211998 COA5Q86WW8 74 aa7.2□□□□□ -1.26
VCL-201ENST00000211998 ADAMTS20P59510 1910 aa7.19□□□□□ -1.26
VCL-201ENST00000211998 Q8NBF4 154 aa7.19□□□□□ -1.26
VCL-201ENST00000211998 NCOR2Q9Y618 2525 aa7.19□□□□□ -1.26
VCL-201ENST00000211998 LOC101927531A0A1B0GV80 90 aa7.18□□□□□ -1.26
VCL-201ENST00000211998 LINC01556Q5JQF7 62 aa7.18□□□□□ -1.26
VCL-201ENST00000211998 IGLV8-61A0A075B6I0 122 aa7.17□□□□□ -1.26
VCL-201ENST00000211998 EIF4EBP3O60516 100 aaPredicted RBP7.17□□□□□ -1.26
VCL-201ENST00000211998 PRR15Q8IV56 129 aa7.17□□□□□ -1.26
VCL-201ENST00000211998 C22orf24Q9Y442 160 aa7.17□□□□□ -1.26
VCL-201ENST00000211998 IGF2RP11717 2491 aa7.17□□□□□ -1.26
VCL-201ENST00000211998 IGKV2D-30A0A075B6S6 120 aa7.17□□□□□ -1.26
VCL-201ENST00000211998 TRBV7-4A0A0J9YYF1 115 aa7.17□□□□□ -1.26
VCL-201ENST00000211998 IGKV2-30P06310 120 aa7.17□□□□□ -1.26
VCL-201ENST00000211998 RPL37AP61513 92 aaKnown RBP7.16□□□□□ -1.26
VCL-201ENST00000211998 PTPRBP23467 1997 aa7.15□□□□□ -1.27
VCL-201ENST00000211998 K7EQZ3 153 aa7.14□□□□□ -1.27
VCL-201ENST00000211998 LINC00476Q8WZB0 136 aa7.14□□□□□ -1.27
VCL-201ENST00000211998 ABCA2Q9BZC7 2435 aa7.14□□□□□ -1.27
VCL-201ENST00000211998 LINC00167Q96N53 147 aa7.12□□□□□ -1.27
VCL-201ENST00000211998 SSBP3-AS1Q7Z2R9 100 aa7.11□□□□□ -1.27
VCL-201ENST00000211998 ST20-AS1Q8NBB2 130 aa7.11□□□□□ -1.27
VCL-201ENST00000211998 H3BNG1 76 aa7.1□□□□□ -1.27
VCL-201ENST00000211998 Q6ZRX8 168 aa7.1□□□□□ -1.27
VCL-201ENST00000211998 PIEZO2Q9H5I5 2752 aa7.1□□□□□ -1.27
VCL-201ENST00000211998 UQCR11O14957 56 aa7.09□□□□□ -1.27
VCL-201ENST00000211998 C9orf129Q5T035 196 aaKnown RBP7.09□□□□□ -1.27
VCL-201ENST00000211998 Q5XG85 94 aa7.09□□□□□ -1.27
VCL-201ENST00000211998 LINC01600Q96MT4 127 aa7.09□□□□□ -1.27
VCL-201ENST00000211998 MYO9AB2RTY4 2548 aa7.08□□□□□ -1.28
VCL-201ENST00000211998 IGLV6-57P01721 117 aa7.08□□□□□ -1.28
VCL-201ENST00000211998 RBM12B-AS1Q9P1G2 102 aa7.07□□□□□ -1.28
VCL-201ENST00000211998 CEP350Q5VT06 3117 aa7.07□□□□□ -1.28
VCL-201ENST00000211998 MIR22HGQ0VDD5 57 aa7.07□□□□□ -1.28
VCL-201ENST00000211998 TLN1Q9Y490 2541 aaKnown RBP7.06□□□□□ -1.28
VCL-201ENST00000211998 MUC4Q99102 2169 aa7.06□□□□□ -1.28
VCL-201ENST00000211998 CDC42SE1Q9NRR8 79 aa7.05□□□□□ -1.28
VCL-201ENST00000211998 A8MWP4 228 aa7.04□□□□□ -1.28
VCL-201ENST00000211998 ZNF462Q96JM2 2506 aa7.04□□□□□ -1.28
VCL-201ENST00000211998 H3BS24 57 aa7.04□□□□□ -1.28
VCL-201ENST00000211998 Q1T7F1 81 aa7.03□□□□□ -1.28
VCL-201ENST00000211998 MOBPQ13875 183 aa7.02□□□□□ -1.29
VCL-201ENST00000211998 PCNTO95613 3336 aa7.02□□□□□ -1.29
VCL-201ENST00000211998 COL4A2P08572 1712 aa7.01□□□□□ -1.29
VCL-201ENST00000211998 CHD8Q9HCK8 2581 aa7.01□□□□□ -1.29
VCL-201ENST00000211998 DOPEY1Q5JWR5 2465 aa6.99□□□□□ -1.29
VCL-201ENST00000211998 GVQW2A0A096LPI5 108 aaPredicted RBP6.99□□□□□ -1.29
VCL-201ENST00000211998 LINC00528Q8N1L1 170 aa6.98□□□□□ -1.29
VCL-201ENST00000211998 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
VCL-201ENST00000211998 MRPL34Q9BQ48 92 aaKnown RBP6.98□□□□□ -1.29
VCL-201ENST00000211998 KLK9Q2XQG4 91 aa6.97□□□□□ -1.29
VCL-201ENST00000211998 FP248Q71RG6 208 aaPredicted RBP6.97□□□□□ -1.29
VCL-201ENST00000211998 EPM2AB3EWF7 344 aa6.97□□□□□ -1.29
VCL-201ENST00000211998 LINC00313P59037 77 aa6.97□□□□□ -1.29
VCL-201ENST00000211998 Q6ZRP5 223 aa6.97□□□□□ -1.29
VCL-201ENST00000211998 OBSCN-AS1Q96MR7 158 aa6.97□□□□□ -1.29
VCL-201ENST00000211998 KRTAP24-1Q3LI83 254 aa6.96□□□□□ -1.29
VCL-201ENST00000211998 SPANXA2-OT1Q8N9U9 137 aa6.96□□□□□ -1.3
VCL-201ENST00000211998 ABCA12Q86UK0 2595 aa6.95□□□□□ -1.3
VCL-201ENST00000211998 JMJD1CQ15652 2540 aa6.95□□□□□ -1.3
VCL-201ENST00000211998 NBDYA0A0U1RRE5 68 aa6.95□□□□□ -1.3
VCL-201ENST00000211998 FAM229BQ4G0N7 80 aa6.95□□□□□ -1.3
VCL-201ENST00000211998 FN1P02751 2386 aaKnown RBP6.95□□□□□ -1.3
VCL-201ENST00000211998 Q8NAQ8 132 aa6.95□□□□□ -1.3
VCL-201ENST00000211998 LRRK2Q5S007 2527 aa6.94□□□□□ -1.3
VCL-201ENST00000211998 C16orf90A8MZG2 172 aa6.94□□□□□ -1.3
VCL-201ENST00000211998 IGFL1Q6UW32 110 aa6.94□□□□□ -1.3
VCL-201ENST00000211998 PHF5AQ7RTV0 110 aaKnown RBP6.94□□□□□ -1.3
VCL-201ENST00000211998 SPACA4Q8TDM5 124 aa6.94□□□□□ -1.3
VCL-201ENST00000211998 RTL8CO15255 209 aa6.94□□□□□ -1.3
VCL-201ENST00000211998 Q8N377 158 aa6.94□□□□□ -1.3
VCL-201ENST00000211998 OCR1Q9BZK8 76 aa6.93□□□□□ -1.3
VCL-201ENST00000211998 WDR87Q6ZQQ6 2873 aa6.93□□□□□ -1.3
VCL-201ENST00000211998 FAM229AH3BQW9 127 aa6.93□□□□□ -1.3
VCL-201ENST00000211998 KCNQ1DNQ9H478 68 aa6.93□□□□□ -1.3
VCL-201ENST00000211998 FAM168BA1KXE4 195 aa6.92□□□□□ -1.3
VCL-201ENST00000211998 CRIPTQ9P021 101 aa6.92□□□□□ -1.3
VCL-201ENST00000211998 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
VCL-201ENST00000211998 LINC00588Q9Y4M8 146 aa6.91□□□□□ -1.3
VCL-201ENST00000211998 C8orf17Q9NRJ1 99 aa6.91□□□□□ -1.3
VCL-201ENST00000211998 COL27A1Q8IZC6 1860 aaPredicted RBP6.9□□□□□ -1.3
VCL-201ENST00000211998 USP9XQ93008 2570 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms