RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gm29289A0A087WPY7 166 aa13.8□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Igkv4-51A0N8I8 119 aa13.8□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Pradc1Q9D9N8 188 aa13.8□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 HilpdaQ9JLS0 64 aa13.8□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Samd5Q3V1H9 173 aa13.8□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Gm5819E9PZ96 154 aa13.8□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Nat8b-psE0CYC6 232 aa13.8□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Foxl1Q64731 336 aa13.8□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 P01726 129 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Mllt11P97783 90 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 TirapQ99JY1 241 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Trav14n-3A0A075B645 120 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Slc25a39Q9D8K8 359 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Pcdh15Q99PJ1 1943 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Gm45871A0A1B0GRI9 540 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Pde6hP61249 83 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Gm11110Q3U4K9 109 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Dscaml1Q4VA61 2053 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Gm16381A0A1Y7VKT9 73 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Jpt2Q6PGH2 190 aaKnown RBP13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Lypd1Q8BLC3 141 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Igkv4-71A0A0G2JEH0 117 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Thy1P01831 162 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Tex48Q9DA81 110 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 MgamB5THE2 1827 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 NracQ8BNX7 165 aa13.79□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Tm4sf19E9Q9H8 206 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Defa27F2Z403 93 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Ly86O88188 162 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Dcaf12l1Q8CBW4 501 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Znhit1Q8R331 154 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Gng5Q80SZ7 68 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Lyzl4Q9D925 145 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Cd99Q8VCN6 175 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 CenpvQ9CXS4 252 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 PtprsB0V2N1 1907 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Gm10803Q3TZS6 135 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 P03985 172 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Ovol1Q9WTJ2 267 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Fbln5Q9WVH9 448 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Prr19B2RW88 366 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Col9a1Q05722 921 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Shisal1Q0VBP7 198 aa13.78□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 Klf13Q9JJZ6 289 aa13.77□□□□□ -0.2
Ccdc88a-201ENSMUST00000040182 P01783 136 aa13.77□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Morn2Q6UL01 79 aa13.77□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Ube2cQ9D1C1 179 aa13.77□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Obox1Q9D350 204 aa13.77□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Olfr748E9Q9Z0 307 aa13.77□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Zglp1Q1WG82 266 aa13.77□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Defb33Q30KN3 62 aa13.77□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 B230104I21RikQ3USW4 141 aa13.77□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Trbv12-1A0A0B4J1H0 124 aa13.77□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 TcraP01849 138 aa13.77□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 P01736 120 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Ighv5-9A0A075B5Q2 117 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Gm4792Q569Q2 183 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 MycbQ6P8Z1 170 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Gm9881Q8BR56 211 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Q8BTC1 67 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Cox6b1P56391 86 aaKnown RBP13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Fbxl15Q91W61 300 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Ube2v1Q9CZY3 147 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Trav21-dv12A0A075B6C4 109 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Klrd1O54707 179 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Znf787Q8BIF9 381 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Mgst3Q9CPU4 153 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Lhx2Q9Z0S2 406 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Cox8bP48772 70 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Tmem255bQ5FW56 369 aa13.76□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 E030025P04RikA2A6V5 185 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Wbp2nlQ9D529 359 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Tdgf1P51865 171 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Tmem86bQ497J1 226 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Igfbpl1Q80W15 270 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Ly6g6eQ8K1T6 166 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Il2raP01590 268 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 SnrpcQ62241 159 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Usmg5Q78IK2 58 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Thap8E9Q695 213 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Znf474Q6V5K9 347 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Msrb2Q78J03 175 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Q9D8L0 127 aa13.75□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Tomm7Q9D173 55 aa13.74□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Plac1Q9JI83 173 aa13.74□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Cd59bP58019 129 aa13.74□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Ms4a12A0A087WSB9 263 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 P01723 117 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Zfp72Q0VFY0 435 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 4930583I09RikQ9D2E3 102 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Tet2Q4JK59 1912 aaKnown RBP13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Ighv14-1A0A075B5R4 117 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Pgpep1lQ9CWB5 130 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Plekhb2Q9QZC7 221 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Wdr83osQ6ZWX0 106 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Nit2Q9JHW2 276 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Dpm2Q9Z324 84 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Ighv1-26A0A075B5V0 117 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Hist1h1tQ07133 208 aa13.73□□□□□ -0.21
Ccdc88a-201ENSMUST00000040182 Vdac2Q60930 295 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms