RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 FAM74A4Q5TZK3 123 aa0.33□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 KRTAP19-3Q7Z4W3 81 aa0.33□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 V9GYV3 84 aa0.33□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 RIF1Q5UIP0 2472 aaKnown RBP0.33□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 TLN1Q9Y490 2541 aaKnown RBP0.33□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 LAMA2P24043 3122 aaKnown RBP0.33□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SLIT1O75093 1534 aa0.33□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SPTAN1Q13813 2472 aaKnown RBP0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CFAP47Q6ZTR5 3102 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 KIAA0556O60303 1618 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 TENM2Q9NT68 2774 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CEP295Q9C0D2 2601 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 MXRA5Q9NR99 2828 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PIGBOS1A0A0B4J2F0 54 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 NAP1L6A6NFF2 107 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 TMEM14DPA8MWL7 114 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 GNG2P59768 71 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 C10orf128Q5T292 105 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 RPL7L1Q6DKI1 246 aaKnown RBP0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SMIM11BQ8TCY0 68 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PPP1R1CQ8WVI7 109 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 LINC01600Q96MT4 127 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 DPY30Q9C005 99 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 DYNLRB1Q9NP97 96 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 LINC01558Q9Y6Z2 57 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 C1orf167Q5SNV9 1468 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 LRRC9Q6ZRR7 1453 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 DNAH12Q6ZR08 3092 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PCNX1Q96RV3 2341 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 ABCC2Q92887 1545 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 KDM5DQ9BY66 1539 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 EYSQ5T1H1 3165 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 RGPD8O14715 1765 aaPredicted RBP0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 RGPD5Q99666 1765 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SONP18583 2426 aaKnown RBP0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 DMBT1Q9UGM3 2413 aaPredicted RBP0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 NEBP20929 6669 aa0.32□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CICQ96RK0 1608 aaPredicted RBP0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 EIF2AK4Q9P2K8 1649 aaKnown RBP0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 ERVK-7P63135 1459 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 LRRC37AA6NMS7 1700 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 ITSN1Q15811 1721 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 TRAV1-2A0A0B4J238 106 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PVALEFA0A1B0GWK0 134 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 IGLC7A0M8Q6 106 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 ATOX1O00244 68 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SFT2D2O95562 160 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 UBA52P62987 128 aaKnown RBP0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 BAGE3Q86Y29 109 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SERP2Q8N6R1 65 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 FAM103A1Q9BTL3 118 aaKnown RBP0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 NPVFQ9HCQ7 196 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CACFD1Q9UGQ2 172 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PRO1854Q9UHT4 67 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 NBEAQ8NFP9 2946 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 DNAJC13O75165 2243 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 MAGI3Q5TCQ9 1506 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 AHCTF1Q8WYP5 2266 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 KMT2CQ8NEZ4 4911 aaKnown RBP0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SAMD9Q5K651 1589 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 TSC2P49815 1807 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 AKAP13Q12802 2813 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 IQGAP3Q86VI3 1631 aa0.31□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 RANBP2P49792 3224 aaKnown RBP0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CCDC88BA6NC98 1476 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CCDC18Q5T9S5 1454 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 BCORQ6W2J9 1755 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 FAM186AA6NE01 2351 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 TPRP12270 2363 aaKnown RBP0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 TRBV25-1A0A075B6N4 114 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 A6NIN4 97 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SYS1-DBNDD2H3BUS1 97 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 M0R135 149 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PPP1R17O96001 155 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 ACYP2P14621 99 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 ASIPP42127 132 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SPINT3P49223 89 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 GNG11P61952 73 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SPAG11BQ08648 103 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SPINK9Q5DT21 86 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PYY3Q5JQD4 70 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SPAG11AQ6PDA7 123 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 Q6ZRX8 168 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 FAM223AQ8IWN6 122 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 TRGV9Q99603 122 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 C20orf78Q9BR46 151 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 PROK2Q9HC23 129 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 SYNE1Q8NF91 8797 aaKnown RBP0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CEP290O15078 2479 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 TEX15Q9BXT5 2789 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 USP32Q8NFA0 1604 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CFAP43Q8NDM7 1665 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 HYDINQ4G0P3 5121 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 EDC4Q6P2E9 1401 aaKnown RBP0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 CELSR1Q9NYQ6 3014 aa0.3□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 VPS13BQ7Z7G8 4022 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 COL14A1Q05707 1796 aaKnown RBP0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 HERC1Q15751 4861 aa0.29□□□□□ -2.36
NPHP3-ACAD11-202ENST00000632629 MGAM2Q2M2H8 2515 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms