RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 IGLV10-54A0A075B6I4 117 aa6.41□□□□□ -1.38
PDLIM5-223ENST00000627587 LINC01556Q5JQF7 62 aa6.41□□□□□ -1.38
PDLIM5-223ENST00000627587 CD164L2Q6UWJ8 174 aa6.41□□□□□ -1.38
PDLIM5-223ENST00000627587 C5orf38Q86SI9 138 aa6.41□□□□□ -1.38
PDLIM5-223ENST00000627587 CHCHD10Q8WYQ3 142 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-223ENST00000627587 DNAH11Q96DT5 4516 aa6.41□□□□□ -1.38
PDLIM5-223ENST00000627587 BVES-AS1Q5T3Y7 98 aa6.41□□□□□ -1.38
PDLIM5-223ENST00000627587 UBE2WQ96B02 151 aa6.41□□□□□ -1.38
PDLIM5-223ENST00000627587 LINC00588Q9Y4M8 146 aa6.41□□□□□ -1.38
PDLIM5-223ENST00000627587 DNAH2Q9P225 4427 aa6.4□□□□□ -1.38
PDLIM5-223ENST00000627587 TRAV8-4A0A0B4J246 113 aa6.4□□□□□ -1.39
PDLIM5-223ENST00000627587 TAL2Q16559 108 aa6.4□□□□□ -1.39
PDLIM5-223ENST00000627587 ENHOQ6UWT2 76 aa6.4□□□□□ -1.39
PDLIM5-223ENST00000627587 C10orf126Q8N4M7 172 aa6.4□□□□□ -1.39
PDLIM5-223ENST00000627587 HIST1H4GQ99525 98 aa6.4□□□□□ -1.39
PDLIM5-223ENST00000627587 FAT2Q9NYQ8 4349 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 A0A1B0GVY2 172 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 COX7A2LO14548 114 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 NDUFA1O15239 70 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 DNAH10OSP0CZ25 163 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 MIAQ16674 131 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 LINC01561Q8N1V8 128 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 RYR1P21817 5038 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 A0A0J9YXY3 114 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 GCSHP23434 173 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 SRSF9Q13242 221 aaKnown RBP eCLIP6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 COX7B2Q8TF08 81 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 Q9H8V8 135 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 TOMM7Q9P0U1 55 aa6.39□□□□□ -1.39
PDLIM5-223ENST00000627587 MALP21145 153 aa6.38□□□□□ -1.39
PDLIM5-223ENST00000627587 COL5A1-AS1Q5SY13 56 aa6.38□□□□□ -1.39
PDLIM5-223ENST00000627587 CEND1Q8N111 149 aa6.38□□□□□ -1.39
PDLIM5-223ENST00000627587 ORAOV1Q8WV07 137 aa6.38□□□□□ -1.39
PDLIM5-223ENST00000627587 UPK3BQ9BT76 320 aa6.38□□□□□ -1.39
PDLIM5-223ENST00000627587 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
PDLIM5-223ENST00000627587 GAGE12HA6NDE8 117 aa6.37□□□□□ -1.39
PDLIM5-223ENST00000627587 FOXI1Q12951 378 aa6.37□□□□□ -1.39
PDLIM5-223ENST00000627587 K7EP13 123 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 PRSS2P07478 247 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 PTTG1IPP53801 180 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 HERV-K104P63124 156 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 KRTAP26-1Q6PEX3 210 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 ZNF625Q96I27 306 aaPredicted RBP6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 LITAFQ99732 161 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 TM2D2Q9BX73 214 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 A6NDN8 102 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 APOMO95445 188 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 CIRBPQ14011 172 aaKnown RBP6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 C6orf226Q5I0X4 101 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 SFTA2Q6UW10 78 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 Q8IZM0 81 aa6.36□□□□□ -1.39
PDLIM5-223ENST00000627587 TIMM17BO60830 172 aa6.35□□□□□ -1.39
PDLIM5-223ENST00000627587 FXYD2P54710 66 aa6.35□□□□□ -1.39
PDLIM5-223ENST00000627587 UBE2DNLQ8IWF7 75 aa6.35□□□□□ -1.39
PDLIM5-223ENST00000627587 C1orf43Q9BWL3 253 aa6.35□□□□□ -1.39
PDLIM5-223ENST00000627587 PKD1P98161 4303 aa6.35□□□□□ -1.39
PDLIM5-223ENST00000627587 RTL8CO15255 209 aa6.34□□□□□ -1.39
PDLIM5-223ENST00000627587 MEIG1Q5JSS6 88 aa6.34□□□□□ -1.39
PDLIM5-223ENST00000627587 IBA57-AS1B1ANH7 110 aa6.34□□□□□ -1.39
PDLIM5-223ENST00000627587 ADAMTSL4-AS1Q5T5F5 129 aa6.34□□□□□ -1.39
PDLIM5-223ENST00000627587 Q6ZVH6 145 aa6.34□□□□□ -1.39
PDLIM5-223ENST00000627587 SPANXDQ9BXN6 97 aa6.34□□□□□ -1.39
PDLIM5-223ENST00000627587 SPANXCQ9NY87 97 aa6.34□□□□□ -1.39
PDLIM5-223ENST00000627587 IGKV2D-24A0A075B6R9 120 aa6.33□□□□□ -1.4
PDLIM5-223ENST00000627587 CXCL5P42830 114 aa6.33□□□□□ -1.4
PDLIM5-223ENST00000627587 KIAA0087Q14695 138 aa6.33□□□□□ -1.4
PDLIM5-223ENST00000627587 Q9HAA7 133 aa6.33□□□□□ -1.4
PDLIM5-223ENST00000627587 M0R2N4 97 aa6.32□□□□□ -1.4
PDLIM5-223ENST00000627587 CKS1BP61024 79 aa6.32□□□□□ -1.4
PDLIM5-223ENST00000627587 NHP2Q9NX24 153 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-223ENST00000627587 EIF4EBP3O60516 100 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-223ENST00000627587 RPL24P83731 157 aaKnown RBP6.32□□□□□ -1.4
PDLIM5-223ENST00000627587 SPAG11BQ08648 103 aa6.32□□□□□ -1.4
PDLIM5-223ENST00000627587 Q6ZR54 194 aa6.32□□□□□ -1.4
PDLIM5-223ENST00000627587 A0A0U1RRA0 63 aa6.31□□□□□ -1.4
PDLIM5-223ENST00000627587 SMIM13P0DJ93 91 aa6.31□□□□□ -1.4
PDLIM5-223ENST00000627587 MUSTN1Q8IVN3 82 aa6.31□□□□□ -1.4
PDLIM5-223ENST00000627587 RMI2Q96E14 147 aa6.31□□□□□ -1.4
PDLIM5-223ENST00000627587 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
PDLIM5-223ENST00000627587 IFITM1P13164 125 aa6.3□□□□□ -1.4
PDLIM5-223ENST00000627587 C1orf134Q5TEV5 83 aa6.3□□□□□ -1.4
PDLIM5-223ENST00000627587 C2orf82Q6UX34 121 aa6.3□□□□□ -1.4
PDLIM5-223ENST00000627587 DAND5Q8N907 189 aa6.3□□□□□ -1.4
PDLIM5-223ENST00000627587 COPS9Q8WXC6 57 aa6.3□□□□□ -1.4
PDLIM5-223ENST00000627587 PKHD1P08F94 4074 aa6.3□□□□□ -1.4
PDLIM5-223ENST00000627587 TAX1BP3O14907 124 aa6.3□□□□□ -1.4
PDLIM5-223ENST00000627587 A0A1B0GWB2 263 aa6.29□□□□□ -1.4
PDLIM5-223ENST00000627587 A4D1N5 150 aa6.29□□□□□ -1.4
PDLIM5-223ENST00000627587 LINC00158P58513 81 aa6.29□□□□□ -1.4
PDLIM5-223ENST00000627587 NPC2P61916 151 aa6.29□□□□□ -1.4
PDLIM5-223ENST00000627587 RAB37Q96AX2 223 aa6.29□□□□□ -1.4
PDLIM5-223ENST00000627587 KRTAP4-12Q9BQ66 201 aa6.29□□□□□ -1.4
PDLIM5-223ENST00000627587 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
PDLIM5-223ENST00000627587 ABCA13Q86UQ4 5058 aa6.28□□□□□ -1.4
PDLIM5-223ENST00000627587 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-223ENST00000627587 ZNF561-AS1K7EIQ3 104 aa6.28□□□□□ -1.4
PDLIM5-223ENST00000627587 K7ERJ3 54 aa6.28□□□□□ -1.4
PDLIM5-223ENST00000627587 C6orf223Q8N319 242 aa6.28□□□□□ -1.4
PDLIM5-223ENST00000627587 LINC00308Q8TCZ7 52 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms