RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 LINC00167Q96N53 147 aa13.63□□□□□ -0.23
LYSMD4-210ENST00000545021 UBL5Q9BZL1 73 aa13.63□□□□□ -0.23
LYSMD4-210ENST00000545021 B4DSR2 109 aa13.62□□□□□ -0.23
LYSMD4-210ENST00000545021 MAPK1IP1LQ8NDC0 245 aa13.62□□□□□ -0.23
LYSMD4-210ENST00000545021 SEC61GP60059 68 aa13.61□□□□□ -0.23
LYSMD4-210ENST00000545021 V9GYY9 64 aa13.61□□□□□ -0.23
LYSMD4-210ENST00000545021 CCL18P55774 89 aa13.6□□□□□ -0.23
LYSMD4-210ENST00000545021 HTN1P15515 57 aa13.6□□□□□ -0.23
LYSMD4-210ENST00000545021 C1orf195Q5TG92 126 aa13.59□□□□□ -0.23
LYSMD4-210ENST00000545021 MSMBP08118 114 aa13.58□□□□□ -0.24
LYSMD4-210ENST00000545021 ATP5EP56381 51 aaPredicted RBP13.58□□□□□ -0.24
LYSMD4-210ENST00000545021 COX7B2Q8TF08 81 aa13.58□□□□□ -0.24
LYSMD4-210ENST00000545021 F8WEM9 126 aa13.56□□□□□ -0.24
LYSMD4-210ENST00000545021 NDUFC1O43677 76 aa13.56□□□□□ -0.24
LYSMD4-210ENST00000545021 IGLV1-40P01703 118 aa13.56□□□□□ -0.24
LYSMD4-210ENST00000545021 BLCAPP62952 87 aa13.56□□□□□ -0.24
LYSMD4-210ENST00000545021 C11orf72Q8NBR9 251 aa13.56□□□□□ -0.24
LYSMD4-210ENST00000545021 TRBV7-6A0A0J9YX20 115 aa13.56□□□□□ -0.24
LYSMD4-210ENST00000545021 LINC00158P58513 81 aa13.56□□□□□ -0.24
LYSMD4-210ENST00000545021 CDC42SE2Q9NRR3 84 aa13.56□□□□□ -0.24
LYSMD4-210ENST00000545021 CELSR1Q9NYQ6 3014 aa13.56□□□□□ -0.24
LYSMD4-210ENST00000545021 NSD1Q96L73 2696 aaPredicted RBP13.56□□□□□ -0.24
LYSMD4-210ENST00000545021 TMEM256-PLSCR3K7ERE1 68 aa13.55□□□□□ -0.24
LYSMD4-210ENST00000545021 LINC00482Q8N8I6 264 aa13.55□□□□□ -0.24
LYSMD4-210ENST00000545021 BRK1Q8WUW1 75 aa13.55□□□□□ -0.24
LYSMD4-210ENST00000545021 RMI2Q96E14 147 aa13.55□□□□□ -0.24
LYSMD4-210ENST00000545021 TEP1Q99973 2627 aaKnown RBP13.55□□□□□ -0.24
LYSMD4-210ENST00000545021 ACANP16112 2415 aa13.55□□□□□ -0.24
LYSMD4-210ENST00000545021 SNURFQ9Y675 71 aa13.54□□□□□ -0.24
LYSMD4-210ENST00000545021 LINC00474Q9P2X8 69 aa13.53□□□□□ -0.24
LYSMD4-210ENST00000545021 ANK3Q12955 4377 aaKnown RBP13.53□□□□□ -0.24
LYSMD4-210ENST00000545021 RBM3P98179 157 aaKnown RBP13.53□□□□□ -0.24
LYSMD4-210ENST00000545021 FN1P02751 2386 aaKnown RBP13.52□□□□□ -0.24
LYSMD4-210ENST00000545021 TRBV6-4A0A1B0GX49 114 aa13.52□□□□□ -0.24
LYSMD4-210ENST00000545021 IBA57-AS1B1ANH7 110 aa13.52□□□□□ -0.24
LYSMD4-210ENST00000545021 FSHBP01225 129 aa13.52□□□□□ -0.25
LYSMD4-210ENST00000545021 ABCA2Q9BZC7 2435 aa13.51□□□□□ -0.25
LYSMD4-210ENST00000545021 ZNF469Q96JG9 3925 aaPredicted RBP13.51□□□□□ -0.25
LYSMD4-210ENST00000545021 PAX4O43316 350 aa13.51□□□□□ -0.25
LYSMD4-210ENST00000545021 PRM2P04554 102 aa13.5□□□□□ -0.25
LYSMD4-210ENST00000545021 Q8N814 137 aa13.5□□□□□ -0.25
LYSMD4-210ENST00000545021 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.5□□□□□ -0.259e-6■■□□□ 12.6
LYSMD4-210ENST00000545021 HIVEP2P31629 2446 aa13.5□□□□□ -0.25
LYSMD4-210ENST00000545021 C2CD3Q4AC94 2353 aa13.49□□□□□ -0.25
LYSMD4-210ENST00000545021 K7EQD1 137 aa13.49□□□□□ -0.25
LYSMD4-210ENST00000545021 CFHR3Q02985 330 aa13.49□□□□□ -0.25
LYSMD4-210ENST00000545021 TRAV10A0A0B4J240 114 aa13.48□□□□□ -0.25
LYSMD4-210ENST00000545021 A8MTW9 85 aa13.48□□□□□ -0.25
LYSMD4-210ENST00000545021 NTM-AS1Q6ZSK4 140 aa13.48□□□□□ -0.25
LYSMD4-210ENST00000545021 A0A0U1RQV1 116 aa13.48□□□□□ -0.25
LYSMD4-210ENST00000545021 TOMM7Q9P0U1 55 aa13.48□□□□□ -0.25
LYSMD4-210ENST00000545021 NF1P21359 2839 aa13.47□□□□□ -0.25
LYSMD4-210ENST00000545021 LINC01547P58512 204 aaPredicted RBP13.47□□□□□ -0.25
LYSMD4-210ENST00000545021 LY6EQ16553 131 aa13.45□□□□□ -0.26
LYSMD4-210ENST00000545021 Q6ZTI0 123 aa13.45□□□□□ -0.26
LYSMD4-210ENST00000545021 SPATA3Q8NHX4 192 aa13.45□□□□□ -0.26
LYSMD4-210ENST00000545021 Q6ZQT0 140 aa13.44□□□□□ -0.26
LYSMD4-210ENST00000545021 A6NDX4 124 aa13.44□□□□□ -0.26
LYSMD4-210ENST00000545021 SVEP1Q4LDE5 3571 aa13.43□□□□□ -0.26
LYSMD4-210ENST00000545021 LOC110117498A0A087WWA1 95 aa13.43□□□□□ -0.26
LYSMD4-210ENST00000545021 TRBV7-4A0A0J9YYF1 115 aa13.43□□□□□ -0.26
LYSMD4-210ENST00000545021 TRBV10-1A0A0K0K1A3 114 aa13.43□□□□□ -0.26
LYSMD4-210ENST00000545021 MTORP42345 2549 aa13.43□□□□□ -0.26
LYSMD4-210ENST00000545021 CXCL6P80162 114 aa13.42□□□□□ -0.26
LYSMD4-210ENST00000545021 MIFP14174 115 aa13.41□□□□□ -0.26
LYSMD4-210ENST00000545021 BRD3OSQ6XYD6 125 aa13.41□□□□□ -0.26
LYSMD4-210ENST00000545021 TMEM89A2RUT3 159 aa13.41□□□□□ -0.26
LYSMD4-210ENST00000545021 Q6ZVQ6 151 aa13.4□□□□□ -0.26
LYSMD4-210ENST00000545021 UBE2L6O14933 153 aa13.4□□□□□ -0.26
LYSMD4-210ENST00000545021 NANOS2P60321 138 aaKnown RBP13.4□□□□□ -0.26
LYSMD4-210ENST00000545021 H3BUX3 64 aa13.39□□□□□ -0.27
LYSMD4-210ENST00000545021 HAMPP81172 84 aa13.39□□□□□ -0.27
LYSMD4-210ENST00000545021 DEFB131AP59861 70 aa13.38□□□□□ -0.27
LYSMD4-210ENST00000545021 IGHV3OR16-9A0A0B4J2B5 98 aa13.37□□□□□ -0.27
LYSMD4-210ENST00000545021 A0A1W2PRX2 142 aa13.37□□□□□ -0.27
LYSMD4-210ENST00000545021 TM2D3Q9BRN9 247 aa13.37□□□□□ -0.27
LYSMD4-210ENST00000545021 ZANQ9Y493 2812 aa13.36□□□□□ -0.27
LYSMD4-210ENST00000545021 Q8N3U1 123 aa13.36□□□□□ -0.27
LYSMD4-210ENST00000545021 SORL1Q92673 2214 aa13.36□□□□□ -0.27
LYSMD4-210ENST00000545021 CSPG4Q6UVK1 2322 aa13.36□□□□□ -0.27
LYSMD4-210ENST00000545021 VPS13CQ709C8 3753 aa13.35□□□□□ -0.27
LYSMD4-210ENST00000545021 A0A087WZ39 114 aa13.35□□□□□ -0.27
LYSMD4-210ENST00000545021 ZNF561-AS1K7EIQ3 104 aa13.35□□□□□ -0.27
LYSMD4-210ENST00000545021 ERC2-IT1O76042 136 aa13.35□□□□□ -0.27
LYSMD4-210ENST00000545021 FAM229BQ4G0N7 80 aa13.35□□□□□ -0.27
LYSMD4-210ENST00000545021 C6orf223Q8N319 242 aa13.34□□□□□ -0.27
LYSMD4-210ENST00000545021 MDFIQ99750 246 aa13.34□□□□□ -0.27
LYSMD4-210ENST00000545021 SETD2Q9BYW2 2564 aaPredicted RBP13.34□□□□□ -0.27
LYSMD4-210ENST00000545021 RNASE1P07998 156 aaKnown RBP13.33□□□□□ -0.27
LYSMD4-210ENST00000545021 KRTAP24-1Q3LI83 254 aa13.33□□□□□ -0.27
LYSMD4-210ENST00000545021 INSP01308 110 aa13.32□□□□□ -0.28
LYSMD4-210ENST00000545021 MPLKIPQ8TAP9 179 aa13.32□□□□□ -0.28
LYSMD4-210ENST00000545021 TMEM254Q8TBM7 123 aa13.32□□□□□ -0.28
LYSMD4-210ENST00000545021 MAP1AP78559 2803 aaPredicted RBP13.32□□□□□ -0.28
LYSMD4-210ENST00000545021 M0R2N4 97 aa13.32□□□□□ -0.28
LYSMD4-210ENST00000545021 ZFHX3Q15911 3703 aa13.32□□□□□ -0.28
LYSMD4-210ENST00000545021 NREPQ16612 68 aa13.31□□□□□ -0.28
LYSMD4-210ENST00000545021 PDE6GP18545 87 aa13.31□□□□□ -0.28
LYSMD4-210ENST00000545021 IL17DQ8TAD2 202 aa13.31□□□□□ -0.28
LYSMD4-210ENST00000545021 IGHV4-38-2P0DP08 117 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms