RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
VBP1-203ENST00000535916 LRRC9Q6ZRR7 1453 aa0.61□□□□□ -2.31
VBP1-203ENST00000535916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.6□□□□□ -2.31
VBP1-203ENST00000535916 A0A0D9SFI3 127 aa0.6□□□□□ -2.31
VBP1-203ENST00000535916 D6R8Y8 96 aa0.6□□□□□ -2.31
VBP1-203ENST00000535916 S100A3P33764 101 aa0.6□□□□□ -2.31
VBP1-203ENST00000535916 SMIM11AP58511 58 aa0.6□□□□□ -2.31
VBP1-203ENST00000535916 SNRPFP62306 86 aaKnown RBP0.6□□□□□ -2.31
VBP1-203ENST00000535916 ALKAL2Q6UX46 152 aa0.6□□□□□ -2.31
VBP1-203ENST00000535916 C6orf201Q7Z4U5 140 aa0.6□□□□□ -2.31
VBP1-203ENST00000535916 MUSTN1Q8IVN3 82 aa0.6□□□□□ -2.31
VBP1-203ENST00000535916 SPCS1Q9Y6A9 102 aa0.6□□□□□ -2.31
VBP1-203ENST00000535916 ZNF469Q96JG9 3925 aaPredicted RBP0.6□□□□□ -2.31
VBP1-203ENST00000535916 ATP7BP35670 1465 aa0.6□□□□□ -2.31
VBP1-203ENST00000535916 KIAA0556O60303 1618 aa0.6□□□□□ -2.31
VBP1-203ENST00000535916 KDM5DQ9BY66 1539 aa0.59□□□□□ -2.31
VBP1-203ENST00000535916 TRBV7-4A0A0J9YYF1 115 aa0.59□□□□□ -2.31
VBP1-203ENST00000535916 LEPROTL1O95214 131 aa0.59□□□□□ -2.31
VBP1-203ENST00000535916 NMSQ5H8A3 153 aa0.59□□□□□ -2.31
VBP1-203ENST00000535916 DEFB123Q8N688 67 aa0.59□□□□□ -2.31
VBP1-203ENST00000535916 PRO0255Q9UI72 69 aa0.59□□□□□ -2.31
VBP1-203ENST00000535916 SUPT6HQ7KZ85 1726 aaKnown RBP0.58□□□□□ -2.32
VBP1-203ENST00000535916 CFAP74Q9C0B2 1584 aa0.58□□□□□ -2.32
VBP1-203ENST00000535916 IQCF6A8MYZ5 107 aa0.58□□□□□ -2.32
VBP1-203ENST00000535916 MAP3K1Q13233 1512 aa0.58□□□□□ -2.32
VBP1-203ENST00000535916 RRBP1Q9P2E9 1410 aaKnown RBP0.57□□□□□ -2.32
VBP1-203ENST00000535916 A0A1B0GU69 56 aa0.57□□□□□ -2.32
VBP1-203ENST00000535916 KRTAP2-3P0C7H8 128 aa0.57□□□□□ -2.32
VBP1-203ENST00000535916 WFDC2Q14508 124 aa0.57□□□□□ -2.32
VBP1-203ENST00000535916 LINC00643Q86TS7 51 aa0.57□□□□□ -2.32
VBP1-203ENST00000535916 S100A13Q99584 98 aa0.57□□□□□ -2.32
VBP1-203ENST00000535916 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
VBP1-203ENST00000535916 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
VBP1-203ENST00000535916 LRRC37AA6NMS7 1700 aa0.57□□□□□ -2.32
VBP1-203ENST00000535916 PKD1L3Q7Z443 1732 aa0.57□□□□□ -2.32
VBP1-203ENST00000535916 SETBP1Q9Y6X0 1596 aa0.57□□□□□ -2.32
VBP1-203ENST00000535916 MYH4Q9Y623 1939 aa0.56□□□□□ -2.32
VBP1-203ENST00000535916 KNTC1P50748 2209 aa0.56□□□□□ -2.32
VBP1-203ENST00000535916 JMJD1CQ15652 2540 aa0.56□□□□□ -2.32
VBP1-203ENST00000535916 MDN1Q9NU22 5596 aa0.56□□□□□ -2.32
VBP1-203ENST00000535916 MYMXA0A1B0GTQ4 84 aa0.56□□□□□ -2.32
VBP1-203ENST00000535916 PRH1P02810 166 aa0.56□□□□□ -2.32
VBP1-203ENST00000535916 GNGT1P63211 74 aa0.56□□□□□ -2.32
VBP1-203ENST00000535916 ST20Q9HBF5 79 aa0.56□□□□□ -2.32
VBP1-203ENST00000535916 MEGF8Q7Z7M0 2845 aa0.56□□□□□ -2.32
VBP1-203ENST00000535916 RGPD1P0DJD0 1748 aa0.55□□□□□ -2.32
VBP1-203ENST00000535916 ASH1LQ9NR48 2969 aaKnown RBP0.55□□□□□ -2.32
VBP1-203ENST00000535916 CEP170BQ9Y4F5 1589 aaPredicted RBP0.55□□□□□ -2.32
VBP1-203ENST00000535916 ACYP1P07311 99 aa0.55□□□□□ -2.32
VBP1-203ENST00000535916 IGLC2P0DOY2 106 aa0.55□□□□□ -2.32
VBP1-203ENST00000535916 IGLC3P0DOY3 106 aa0.55□□□□□ -2.32
VBP1-203ENST00000535916 PLGLAQ15195 96 aa0.55□□□□□ -2.32
VBP1-203ENST00000535916 Q8IZM0 81 aa0.55□□□□□ -2.32
VBP1-203ENST00000535916 LRRC7Q96NW7 1537 aa0.54□□□□□ -2.32
VBP1-203ENST00000535916 PIGYQ3MUY2 71 aa0.54□□□□□ -2.32
VBP1-203ENST00000535916 ABCA8O94911 1581 aa0.53□□□□□ -2.32
VBP1-203ENST00000535916 USP32Q8NFA0 1604 aa0.53□□□□□ -2.32
VBP1-203ENST00000535916 PTPN23Q9H3S7 1636 aa0.53□□□□□ -2.32
VBP1-203ENST00000535916 ZNF831Q5JPB2 1677 aa0.53□□□□□ -2.32
VBP1-203ENST00000535916 QSER1Q2KHR3 1735 aa0.53□□□□□ -2.32
VBP1-203ENST00000535916 LRRIQ1Q96JM4 1722 aa0.53□□□□□ -2.32
VBP1-203ENST00000535916 KANTRA0A1W2PQU2 76 aa0.53□□□□□ -2.32
VBP1-203ENST00000535916 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.32
VBP1-203ENST00000535916 ABCC1P33527 1531 aa0.53□□□□□ -2.33
VBP1-203ENST00000535916 LTN1O94822 1766 aa0.52□□□□□ -2.33
VBP1-203ENST00000535916 ZNF462Q96JM2 2506 aa0.52□□□□□ -2.33
VBP1-203ENST00000535916 K7EQZ3 153 aa0.52□□□□□ -2.33
VBP1-203ENST00000535916 ADIRFQ15847 76 aa0.52□□□□□ -2.33
VBP1-203ENST00000535916 MAGI3Q5TCQ9 1506 aa0.52□□□□□ -2.33
VBP1-203ENST00000535916 PIK3C2BO00750 1634 aa0.52□□□□□ -2.33
VBP1-203ENST00000535916 ZFHX3Q15911 3703 aa0.52□□□□□ -2.33
VBP1-203ENST00000535916 CADP27708 2225 aa0.52□□□□□ -2.33
VBP1-203ENST00000535916 CACNA1CQ13936 2221 aa0.52□□□□□ -2.33
VBP1-203ENST00000535916 CEBPZOSA8MTT3 80 aa0.51□□□□□ -2.33
VBP1-203ENST00000535916 POLR1AO95602 1720 aaPredicted RBP0.51□□□□□ -2.33
VBP1-203ENST00000535916 NKTRP30414 1462 aaKnown RBP0.51□□□□□ -2.33
VBP1-203ENST00000535916 BVES-AS1Q5T3Y7 98 aa0.51□□□□□ -2.33
VBP1-203ENST00000535916 Q5VSD8 79 aa0.51□□□□□ -2.33
VBP1-203ENST00000535916 PPRC1Q5VV67 1664 aaKnown RBP0.51□□□□□ -2.33
VBP1-203ENST00000535916 CCDC141Q6ZP82 1450 aa0.51□□□□□ -2.33
VBP1-203ENST00000535916 SMR3AQ99954 134 aa0.51□□□□□ -2.33
VBP1-203ENST00000535916 MYO7AQ13402 2215 aa0.5□□□□□ -2.33
VBP1-203ENST00000535916 URB2Q14146 1524 aaKnown RBP0.5□□□□□ -2.33
VBP1-203ENST00000535916 CCDC88BA6NC98 1476 aa0.5□□□□□ -2.33
VBP1-203ENST00000535916 NCOA2Q15596 1464 aa0.5□□□□□ -2.33
VBP1-203ENST00000535916 A0A1B0GUT8 65 aa0.5□□□□□ -2.33
VBP1-203ENST00000535916 RGPD2P0DJD1 1756 aa0.5□□□□□ -2.33
VBP1-203ENST00000535916 H3BUT2 72 aa0.49□□□□□ -2.33
VBP1-203ENST00000535916 DEFB112Q30KQ8 113 aa0.49□□□□□ -2.33
VBP1-203ENST00000535916 SPINK6Q6UWN8 80 aa0.49□□□□□ -2.33
VBP1-203ENST00000535916 ASXL3Q9C0F0 2248 aa0.49□□□□□ -2.33
VBP1-203ENST00000535916 FXYD6-FXYD2A0A087WZ82 144 aa0.48□□□□□ -2.33
VBP1-203ENST00000535916 COX6B1P14854 86 aa0.48□□□□□ -2.33
VBP1-203ENST00000535916 DEFB121Q5J5C9 76 aa0.48□□□□□ -2.33
VBP1-203ENST00000535916 FAM208BQ5VWN6 2430 aa0.48□□□□□ -2.33
VBP1-203ENST00000535916 NAV3Q8IVL0 2385 aa0.48□□□□□ -2.33
VBP1-203ENST00000535916 ANKARQ7Z5J8 1434 aa0.47□□□□□ -2.33
VBP1-203ENST00000535916 FMN2Q9NZ56 1722 aa0.47□□□□□ -2.33
VBP1-203ENST00000535916 PREX1Q8TCU6 1659 aa0.47□□□□□ -2.33
VBP1-203ENST00000535916 USMG5Q96IX5 58 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms