RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 KRTAP21-3Q3LHN1 58 aa9.03□□□□□ -0.96
CDC27-210ENST00000533415 C10orf25Q5T742 122 aa9.03□□□□□ -0.96
CDC27-210ENST00000533415 C6orf226Q5I0X4 101 aa9.02□□□□□ -0.97
CDC27-210ENST00000533415 NHLRC4P0CG21 123 aaPredicted RBP9.02□□□□□ -0.97
CDC27-210ENST00000533415 LINC01556Q5JQF7 62 aa9.02□□□□□ -0.97
CDC27-210ENST00000533415 UBE2DNLQ8IWF7 75 aa9.01□□□□□ -0.97
CDC27-210ENST00000533415 KLK5Q9Y337 293 aaPredicted RBP9.01□□□□□ -0.97
CDC27-210ENST00000533415 KRTAP26-1Q6PEX3 210 aa9□□□□□ -0.97
CDC27-210ENST00000533415 SOSTDC1Q6X4U4 206 aa9□□□□□ -0.97
CDC27-210ENST00000533415 VPS13DQ5THJ4 4388 aa9□□□□□ -0.97
CDC27-210ENST00000533415 H7C2G1 150 aa9□□□□□ -0.97
CDC27-210ENST00000533415 TM2D2Q9BX73 214 aa9□□□□□ -0.97
CDC27-210ENST00000533415 A4D1N5 150 aa8.99□□□□□ -0.97
CDC27-210ENST00000533415 DNAH10OSP0CZ25 163 aa8.99□□□□□ -0.97
CDC27-210ENST00000533415 KIAA0087Q14695 138 aa8.99□□□□□ -0.97
CDC27-210ENST00000533415 UNQ6190/PRO20217Q6UXQ8 127 aa8.99□□□□□ -0.97
CDC27-210ENST00000533415 M0R2N4 97 aa8.98□□□□□ -0.97
CDC27-210ENST00000533415 LINC00158P58513 81 aa8.98□□□□□ -0.97
CDC27-210ENST00000533415 SPAG11BQ08648 103 aa8.98□□□□□ -0.97
CDC27-210ENST00000533415 C1orf43Q9BWL3 253 aa8.98□□□□□ -0.97
CDC27-210ENST00000533415 H3BUT2 72 aa8.97□□□□□ -0.97
CDC27-210ENST00000533415 TMEM238C9JI98 176 aa8.97□□□□□ -0.97
CDC27-210ENST00000533415 CKS1BP61024 79 aa8.97□□□□□ -0.97
CDC27-210ENST00000533415 MIR7-3HGQ8N6C7 128 aa8.97□□□□□ -0.97
CDC27-210ENST00000533415 DNAH2Q9P225 4427 aa8.96□□□□□ -0.97
CDC27-210ENST00000533415 MIAQ16674 131 aa8.96□□□□□ -0.97
CDC27-210ENST00000533415 CFC1BP0CG36 223 aa8.96□□□□□ -0.98
CDC27-210ENST00000533415 CFC1P0CG37 223 aa8.96□□□□□ -0.98
CDC27-210ENST00000533415 CFAP161Q6P656 301 aa8.96□□□□□ -0.98
CDC27-210ENST00000533415 SPANXB1Q9NS25 103 aaPredicted RBP8.96□□□□□ -0.98
CDC27-210ENST00000533415 A6NDN8 102 aa8.95□□□□□ -0.98
CDC27-210ENST00000533415 C15orf56Q8N910 161 aa8.95□□□□□ -0.98
CDC27-210ENST00000533415 COX11Q9Y6N1 276 aa8.95□□□□□ -0.98
CDC27-210ENST00000533415 WFDC2Q14508 124 aa8.94□□□□□ -0.98
CDC27-210ENST00000533415 TAL2Q16559 108 aa8.94□□□□□ -0.98
CDC27-210ENST00000533415 Q8IZM0 81 aa8.94□□□□□ -0.98
CDC27-210ENST00000533415 LINC00308Q8TCZ7 52 aa8.94□□□□□ -0.98
CDC27-210ENST00000533415 HYDINQ4G0P3 5121 aa8.93□□□□□ -0.98
CDC27-210ENST00000533415 PRR3P79522 188 aaKnown RBP8.93□□□□□ -0.98
CDC27-210ENST00000533415 NUPR2A6NF83 97 aa8.93□□□□□ -0.98
CDC27-210ENST00000533415 LBHQ53QV2 105 aaPredicted RBP8.93□□□□□ -0.98
CDC27-210ENST00000533415 ERG28Q9UKR5 140 aa8.93□□□□□ -0.98
CDC27-210ENST00000533415 TRAV8-4A0A0B4J246 113 aa8.92□□□□□ -0.98
CDC27-210ENST00000533415 IBA57-AS1B1ANH7 110 aa8.92□□□□□ -0.98
CDC27-210ENST00000533415 PGPEP1Q9NXJ5 209 aa8.92□□□□□ -0.98
CDC27-210ENST00000533415 CIRBPQ14011 172 aaKnown RBP8.91□□□□□ -0.98
CDC27-210ENST00000533415 VAMP3Q15836 100 aa8.91□□□□□ -0.98
CDC27-210ENST00000533415 SPANXDQ9BXN6 97 aa8.91□□□□□ -0.98
CDC27-210ENST00000533415 SPANXCQ9NY87 97 aa8.91□□□□□ -0.98
CDC27-210ENST00000533415 FUSP35637 526 aaKnown RBP eCLIP8.91□□□□□ -0.98
CDC27-210ENST00000533415 UPK3BQ9BT76 320 aa8.91□□□□□ -0.98
CDC27-210ENST00000533415 Q8NDZ9 215 aa8.9□□□□□ -0.98
CDC27-210ENST00000533415 C6orf48Q9UBA6 75 aa8.9□□□□□ -0.98
CDC27-210ENST00000533415 Q6ZRU5 148 aa8.9□□□□□ -0.99
CDC27-210ENST00000533415 C9orf118A6NHY6 69 aa8.89□□□□□ -0.99
CDC27-210ENST00000533415 ZNF561-AS1K7EIQ3 104 aa8.89□□□□□ -0.99
CDC27-210ENST00000533415 TSPAN13O95857 204 aa8.89□□□□□ -0.99
CDC27-210ENST00000533415 HERV-K104P63124 156 aa8.89□□□□□ -0.99
CDC27-210ENST00000533415 XAGE1AQ9HD64 81 aa8.89□□□□□ -0.99
CDC27-210ENST00000533415 SLPIP03973 132 aa8.89□□□□□ -0.99
CDC27-210ENST00000533415 MTURNQ8N3F0 131 aa8.89□□□□□ -0.99
CDC27-210ENST00000533415 USP17L23D6RBM5 183 aa8.88□□□□□ -0.99
CDC27-210ENST00000533415 RPL24P83731 157 aaKnown RBP8.88□□□□□ -0.99
CDC27-210ENST00000533415 CAMK2N2Q96S95 79 aa8.88□□□□□ -0.99
CDC27-210ENST00000533415 NTN5Q8WTR8 489 aaPredicted RBP8.88□□□□□ -0.99
CDC27-210ENST00000533415 MUC7Q8TAX7 377 aa8.87□□□□□ -0.99
CDC27-210ENST00000533415 TIMM17BO60830 172 aa8.87□□□□□ -0.99
CDC27-210ENST00000533415 TMEM238LA0A1B0GVL6 79 aa8.86□□□□□ -0.99
CDC27-210ENST00000533415 A0A1B0GWB2 263 aa8.86□□□□□ -0.99
CDC27-210ENST00000533415 A6NJY4 79 aa8.86□□□□□ -0.99
CDC27-210ENST00000533415 LOC107984156A0A0G2JMH3 177 aa8.86□□□□□ -0.99
CDC27-210ENST00000533415 Q1RN00 199 aa8.86□□□□□ -0.99
CDC27-210ENST00000533415 ARL17AQ8IVW1 177 aa8.86□□□□□ -0.99
CDC27-210ENST00000533415 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
CDC27-210ENST00000533415 GAGE2EQ4V326 116 aa8.85□□□□□ -0.99
CDC27-210ENST00000533415 SND1-IT1Q9HBX3 110 aa8.85□□□□□ -0.99
CDC27-210ENST00000533415 GAGE2DQ9UEU5 116 aa8.85□□□□□ -0.99
CDC27-210ENST00000533415 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.85□□□□□ -0.99
CDC27-210ENST00000533415 A0A1W2PPM0 123 aa8.85□□□□□ -0.99
CDC27-210ENST00000533415 LINC01561Q8N1V8 128 aa8.85□□□□□ -0.99
CDC27-210ENST00000533415 PRO1854Q9UHT4 67 aa8.85□□□□□ -0.99
CDC27-210ENST00000533415 IGKV2-28A0A075B6P5 120 aa8.84□□□□□ -0.99
CDC27-210ENST00000533415 LY6G6CO95867 125 aa8.84□□□□□ -0.99
CDC27-210ENST00000533415 IGKV2D-28P01615 120 aa8.84□□□□□ -0.99
CDC27-210ENST00000533415 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
CDC27-210ENST00000533415 NBDYA0A0U1RRE5 68 aa8.83□□□□□ -1
CDC27-210ENST00000533415 PSCAO43653 123 aa8.83□□□□□ -1
CDC27-210ENST00000533415 LINC00337Q8N6G1 96 aa8.83□□□□□ -1
CDC27-210ENST00000533415 NCR3O14931 201 aa8.83□□□□□ -1
CDC27-210ENST00000533415 SPCS1Q9Y6A9 102 aa8.82□□□□□ -1
CDC27-210ENST00000533415 PSMB2P49721 201 aa8.81□□□□□ -1
CDC27-210ENST00000533415 IFITM1P13164 125 aa8.81□□□□□ -1
CDC27-210ENST00000533415 GVQW2A0A096LPI5 108 aaPredicted RBP8.8□□□□□ -1
CDC27-210ENST00000533415 CXCL5P42830 114 aa8.8□□□□□ -1
CDC27-210ENST00000533415 Q6ZRP5 223 aa8.8□□□□□ -1
CDC27-210ENST00000533415 A0A0B4J2C4 111 aa8.8□□□□□ -1
CDC27-210ENST00000533415 FABP2P12104 132 aa8.8□□□□□ -1
CDC27-210ENST00000533415 SYCNQ0VAF6 134 aa8.8□□□□□ -1
CDC27-210ENST00000533415 OR13C6PQ8NH95 151 aa8.8□□□□□ -1
CDC27-210ENST00000533415 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms