RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 F2Z2F3 143 aa4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 SH2D1AO60880 128 aa4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 IGLV2-8P01709 118 aa4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 HLA-DQA1P01909 254 aa4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 RNASE3P12724 160 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 VPS13DQ5THJ4 4388 aa4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 TRBV20OR9-2A0A075B6H5 130 aa4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 MRPS36P82909 103 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 NXT2Q9NPJ8 142 aaKnown RBP4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 HIGD1BQ9P298 99 aa4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 HYDINQ4G0P3 5121 aa4.36□□□□□ -1.71
ATPAF1-209ENST00000529214 H3BNG1 76 aa4.36□□□□□ -1.71
ATPAF1-209ENST00000529214 UBE2L6O14933 153 aa4.36□□□□□ -1.71
ATPAF1-209ENST00000529214 ARMS2P0C7Q2 107 aa4.36□□□□□ -1.71
ATPAF1-209ENST00000529214 S100A4P26447 101 aaKnown RBP4.36□□□□□ -1.71
ATPAF1-209ENST00000529214 FHL2Q14192 279 aa4.36□□□□□ -1.71
ATPAF1-209ENST00000529214 ZNF876PQ49A33 203 aa4.36□□□□□ -1.71
ATPAF1-209ENST00000529214 FP248Q71RG6 208 aaPredicted RBP4.36□□□□□ -1.71
ATPAF1-209ENST00000529214 IL36BQ9NZH7 164 aa4.36□□□□□ -1.71
ATPAF1-209ENST00000529214 RYR3Q15413 4870 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 C19orf71A6NCJ1 209 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 C9JCJ5 164 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 ZNF73O43830 326 aaPredicted RBP4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 LY6G6CO95867 125 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 IGHV3-53P01767 116 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 MGST1P10620 155 aaKnown RBP4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 HERVK_113P61574 105 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 VSIG2Q96IQ7 327 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 PGLYRP4Q96LB8 373 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 CHAC1Q9BUX1 264 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 PRO0255Q9UI72 69 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 ALMS1Q8TCU4 4167 aa4.35□□□□□ -1.71
ATPAF1-209ENST00000529214 RYR2Q92736 4967 aa4.34□□□□□ -1.71
ATPAF1-209ENST00000529214 TMSB15BA0A087X1C1 80 aa4.34□□□□□ -1.71
ATPAF1-209ENST00000529214 IGHV1-24A0A0C4DH33 117 aa4.34□□□□□ -1.71
ATPAF1-209ENST00000529214 A0A0J9YY99 117 aa4.34□□□□□ -1.71
ATPAF1-209ENST00000529214 M0R378 163 aa4.34□□□□□ -1.71
ATPAF1-209ENST00000529214 FAM19A3Q7Z5A8 133 aa4.34□□□□□ -1.71
ATPAF1-209ENST00000529214 C6orf223Q8N319 242 aa4.34□□□□□ -1.71
ATPAF1-209ENST00000529214 FAM19A2Q8N3H0 131 aa4.34□□□□□ -1.71
ATPAF1-209ENST00000529214 UPK3BQ9BT76 320 aa4.34□□□□□ -1.71
ATPAF1-209ENST00000529214 KMT2AQ03164 3969 aa4.33□□□□□ -1.72
ATPAF1-209ENST00000529214 TRGV4A0A0C4DH28 118 aa4.33□□□□□ -1.72
ATPAF1-209ENST00000529214 H3BVH4 76 aa4.33□□□□□ -1.72
ATPAF1-209ENST00000529214 SS18Q15532 418 aa4.33□□□□□ -1.72
ATPAF1-209ENST00000529214 SERP2Q8N6R1 65 aa4.33□□□□□ -1.72
ATPAF1-209ENST00000529214 NHP2Q9NX24 153 aaKnown RBP4.33□□□□□ -1.72
ATPAF1-209ENST00000529214 PHLDA3Q9Y5J5 127 aa4.33□□□□□ -1.72
ATPAF1-209ENST00000529214 LY96Q9Y6Y9 160 aa4.33□□□□□ -1.72
ATPAF1-209ENST00000529214 MUC4Q99102 2169 aa4.33□□□□□ -1.72
ATPAF1-209ENST00000529214 IGLV5-45A0A087WSX0 123 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 A0A096LPF7 62 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 IGLV5-52A0A0A0MRZ9 124 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 TRAV8-3A0A0A6YYJ7 113 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 TRBV27A0A0K0K1C4 114 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 A8MUN3 132 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 K7ERJ3 54 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 TIMM17BO60830 172 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 INAFM2P0DMQ5 153 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 FXYD2P54710 66 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 ZNF56Q15929 161 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 ZFP2Q6ZN57 461 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 MPLKIPQ8TAP9 179 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 TIMM17AQ99595 171 aa4.32□□□□□ -1.72
ATPAF1-209ENST00000529214 IGHV3-73A0A0B4J1V6 119 aa4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 TRBV6-4A0A1B0GX49 114 aa4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 TMEM256-PLSCR3K7ERE1 68 aa4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 M0R381 172 aa4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 LST1O00453 97 aa4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 CCL18P55774 89 aa4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 HIST1H4AP62805 103 aaKnown RBP4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 HBBP68871 147 aa4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 ESRGQ1W209 222 aa4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 LCA10Q71F78 164 aa4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 SLC25A29Q8N8R3 303 aa4.31□□□□□ -1.72
ATPAF1-209ENST00000529214 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 K7EQD1 137 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 NXPH4O95158 308 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 ACYP1P07311 99 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 PSMB2P49721 201 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 TMEM170BQ5T4T1 132 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 SPANXN1Q5VSR9 72 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 UBE2DNLQ8IWF7 75 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 CYSTM1Q9H1C7 97 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 RPP21Q9H633 154 aaKnown RBP4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 LINC00588Q9Y4M8 146 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 ICOSQ9Y6W8 199 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 LOC100131303A0A0U1RQF7 123 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 LEPROTL1O95214 131 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 MP68P56378 58 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 RHOHQ15669 191 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 LYPD5Q6UWN5 251 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 LYZL1Q6UWQ5 148 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 C5orf38Q86SI9 138 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 TOMM6Q96B49 74 aa4.3□□□□□ -1.72
ATPAF1-209ENST00000529214 CHCHD1Q96BP2 118 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms