RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 hADV29S1A0JD25 119 aa3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 RBMY1BA6NDE4 496 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 RBMY1EA6NEQ0 496 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 IBA57-AS1B1ANH7 110 aa3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 NDUFC2O95298 119 aa3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 RBMY1DP0C7P1 496 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 RPL36AP83881 106 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 C3orf56Q8N813 242 aa3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 COX7B2Q8TF08 81 aa3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 RPL36ALQ969Q0 106 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 DPH3Q96FX2 82 aa3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 FBN3Q75N90 2809 aa3.52□□□□□ -1.85
CTNNA1-241ENST00000524127 A0A1W2PRX2 142 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 KNCNA6PVL3 124 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 USP17L23D6RBM5 183 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 JMJD7-PLA2G4BH0Y9G9 81 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 K7EQD1 137 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 CCKP06307 115 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 HOXD3P31249 432 aaPredicted RBP3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 SYNJ2BPP57105 145 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 DEFB131AP59861 70 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 LYPD5Q6UWN5 251 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 LINC01561Q8N1V8 128 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 SMIM11BQ8TCY0 68 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 SND1-IT1Q9HBX3 110 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 Q9UF83 564 aa3.51□□□□□ -1.85
CTNNA1-241ENST00000524127 IGKV2-28A0A075B6P5 120 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 TRAV25A0A0B4J276 109 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 IGHV3-38A0A0C4DH36 116 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 LOC107984640A0A0U1RRK4 108 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 J3QLI3 93 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 IGKV2D-28P01615 120 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 DEFB112Q30KQ8 113 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 LCE2AQ5TA79 106 aaPredicted RBP3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 MIR7-3HGQ8N6C7 128 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 LINC00337Q8N6G1 96 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 C11orf44Q8N8P7 122 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 TMEM243Q9BU79 118 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 MAP6D1Q9H9H5 199 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 Q9HAA7 133 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 LINC00846Q9NV44 126 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 ORMDL1Q9P0S3 153 aa3.5□□□□□ -1.85
CTNNA1-241ENST00000524127 NACAE9PAV3 2078 aa3.49□□□□□ -1.85
CTNNA1-241ENST00000524127 A0A087WYN8 130 aa3.49□□□□□ -1.85
CTNNA1-241ENST00000524127 TRAV13-1A0A0B4J241 112 aa3.49□□□□□ -1.85
CTNNA1-241ENST00000524127 TRBV6-4A0A1B0GX49 114 aa3.49□□□□□ -1.85
CTNNA1-241ENST00000524127 EPM2AB3EWF7 344 aa3.49□□□□□ -1.85
CTNNA1-241ENST00000524127 H3BQ85 93 aa3.49□□□□□ -1.85
CTNNA1-241ENST00000524127 CCL18P55774 89 aa3.49□□□□□ -1.85
CTNNA1-241ENST00000524127 HILS1P60008 231 aa3.49□□□□□ -1.85
CTNNA1-241ENST00000524127 NTM-AS1Q6ZSK4 140 aa3.49□□□□□ -1.85
CTNNA1-241ENST00000524127 C14orf132Q9NPU4 83 aa3.49□□□□□ -1.85
CTNNA1-241ENST00000524127 A0A087WZ39 114 aa3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 IGKV3D-7A0A0C4DH55 119 aa3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 A0A0U1RRA0 63 aa3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 DNAJC9-AS1A6NH13 148 aa3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 UBE2L6O14933 153 aa3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 IGHV4-59P01825 116 aa3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 HTN1P15515 57 aa3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 LINC00158P58513 81 aa3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 KRTAP10-3P60369 221 aa3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 ZNF702PQ9H963 129 aa3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 HUWE1Q7Z6Z7 4374 aaKnown RBP3.48□□□□□ -1.85
CTNNA1-241ENST00000524127 TRGV1A0A0A0MS02 117 aa3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 IGHV3OR16-9A0A0B4J2B5 98 aa3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 TMEM256-PLSCR3K7ERE1 68 aa3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 LECT2O14960 151 aa3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 CMC4P56277 68 aaPredicted RBP3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 SS18Q15532 418 aa3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 DEFB114Q30KQ6 69 aa3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 C9orf129Q5T035 196 aaKnown RBP3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 Q6YL49 198 aa3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 TMEM86BQ8N661 226 aa3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 SPATA3Q8NHX4 192 aa3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 MRAPQ8TCY5 172 aa3.47□□□□□ -1.85
CTNNA1-241ENST00000524127 TRAV7A0A075B6U4 112 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 LOC110117498A0A087WWA1 95 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 NCR3O14931 201 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 OXTP01178 125 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 GHRHP01286 108 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 RNASE1P07998 156 aaKnown RBP3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 PDE6GP18545 87 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 Q5XG85 94 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 C10orf99Q6UWK7 81 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 C1orf158Q8N1D5 194 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 MUC7Q8TAX7 377 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 DYNLRB2Q8TF09 96 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 C4orf3Q8WVX3 66 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 UBL5Q9BZL1 73 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 CYSTM1Q9H1C7 97 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 SERP1Q9Y6X1 66 aa3.46□□□□□ -1.86
CTNNA1-241ENST00000524127 MEGF8Q7Z7M0 2845 aa3.45□□□□□ -1.86
CTNNA1-241ENST00000524127 A0A087WVE0 104 aa3.45□□□□□ -1.86
CTNNA1-241ENST00000524127 FAM236DA0A1B0GTK5 79 aa3.45□□□□□ -1.86
CTNNA1-241ENST00000524127 PAX4O43316 350 aa3.45□□□□□ -1.86
CTNNA1-241ENST00000524127 PRM2P04554 102 aa3.45□□□□□ -1.86
CTNNA1-241ENST00000524127 FAM236CP0DP71 79 aa3.45□□□□□ -1.86
CTNNA1-241ENST00000524127 SLURP1P55000 103 aa3.45□□□□□ -1.86
CTNNA1-241ENST00000524127 COX17Q14061 63 aa3.45□□□□□ -1.86
CTNNA1-241ENST00000524127 Q8IZM0 81 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms