RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 HMGN3Q15651 99 aa0.12□□□□□ -2.39
RNU6-840P-201ENST00000517275 DEFB109BQ30KR1 87 aa0.12□□□□□ -2.39
RNU6-840P-201ENST00000517275 LCN9Q8WX39 176 aa0.12□□□□□ -2.39
RNU6-840P-201ENST00000517275 TROQ12816 1431 aaPredicted RBP0.12□□□□□ -2.39
RNU6-840P-201ENST00000517275 SCN7AQ01118 1682 aa0.11□□□□□ -2.39
RNU6-840P-201ENST00000517275 SETBP1Q9Y6X0 1596 aa0.11□□□□□ -2.39
RNU6-840P-201ENST00000517275 PLEKHH2Q8IVE3 1493 aa0.11□□□□□ -2.39
RNU6-840P-201ENST00000517275 RAPGEF2Q9Y4G8 1499 aa0.11□□□□□ -2.39
RNU6-840P-201ENST00000517275 DMBT1Q9UGM3 2413 aaPredicted RBP0.11□□□□□ -2.39
RNU6-840P-201ENST00000517275 K7EQZ3 153 aa0.11□□□□□ -2.39
RNU6-840P-201ENST00000517275 UQCRHP07919 91 aa0.11□□□□□ -2.39
RNU6-840P-201ENST00000517275 PSMG4Q5JS54 123 aa0.11□□□□□ -2.39
RNU6-840P-201ENST00000517275 IQSEC2Q5JU85 1478 aa0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 NRXN1Q9ULB1 1477 aa0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 ABCC2Q92887 1545 aa0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 COL7A1Q02388 2944 aa0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 A0A087WVE0 104 aa0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 H3BQF6 201 aa0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 SPRR1BP22528 89 aa0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 ALKAL2Q6UX46 152 aa0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 FDCSPQ8NFU4 85 aa0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 PPRC1Q5VV67 1664 aaKnown RBP0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 UBR5O95071 2799 aaPredicted RBP0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 SYNE2Q8WXH0 6885 aaKnown RBP0.1□□□□□ -2.39
RNU6-840P-201ENST00000517275 PKD1L1Q8TDX9 2849 aa0.09□□□□□ -2.39
RNU6-840P-201ENST00000517275 ABCA2Q9BZC7 2435 aa0.09□□□□□ -2.39
RNU6-840P-201ENST00000517275 EPRSP07814 1512 aaKnown RBP0.09□□□□□ -2.39
RNU6-840P-201ENST00000517275 KMT2AQ03164 3969 aa0.09□□□□□ -2.4
RNU6-840P-201ENST00000517275 CHD6Q8TD26 2715 aa0.09□□□□□ -2.4
RNU6-840P-201ENST00000517275 A0A0G2JMZ2 1700 aa0.09□□□□□ -2.4
RNU6-840P-201ENST00000517275 SPTBN1Q01082 2364 aaKnown RBP0.09□□□□□ -2.4
RNU6-840P-201ENST00000517275 PDCD11Q14690 1871 aaKnown RBP0.08□□□□□ -2.4
RNU6-840P-201ENST00000517275 NUP188Q5SRE5 1749 aa0.08□□□□□ -2.4
RNU6-840P-201ENST00000517275 ARMS2P0C7Q2 107 aa0.08□□□□□ -2.4
RNU6-840P-201ENST00000517275 DOPEY2Q9Y3R5 2298 aa0.08□□□□□ -2.4
RNU6-840P-201ENST00000517275 MYCBP2O75592 4640 aa0.07□□□□□ -2.4
RNU6-840P-201ENST00000517275 XRN1Q8IZH2 1706 aaKnown RBP0.07□□□□□ -2.4
RNU6-840P-201ENST00000517275 FAT2Q9NYQ8 4349 aa0.07□□□□□ -2.4
RNU6-840P-201ENST00000517275 FXYD6-FXYD2A0A087WZ82 144 aa0.07□□□□□ -2.4
RNU6-840P-201ENST00000517275 H0Y9P7 68 aa0.07□□□□□ -2.4
RNU6-840P-201ENST00000517275 GYPAP02724 150 aa0.07□□□□□ -2.4
RNU6-840P-201ENST00000517275 USMG5Q96IX5 58 aa0.07□□□□□ -2.4
RNU6-840P-201ENST00000517275 FANCAO15360 1455 aa0.07□□□□□ -2.4
RNU6-840P-201ENST00000517275 DNAJC13O75165 2243 aa0.07□□□□□ -2.4
RNU6-840P-201ENST00000517275 CACNA1AO00555 2505 aa0.07□□□□□ -2.4
RNU6-840P-201ENST00000517275 HMCN2Q8NDA2 5059 aa0.06□□□□□ -2.4
RNU6-840P-201ENST00000517275 EDC4Q6P2E9 1401 aaKnown RBP0.06□□□□□ -2.4
RNU6-840P-201ENST00000517275 WNK2Q9Y3S1 2297 aa0.06□□□□□ -2.4
RNU6-840P-201ENST00000517275 A0A1B0GU69 56 aa0.06□□□□□ -2.4
RNU6-840P-201ENST00000517275 FAUP35544 74 aaKnown RBP0.06□□□□□ -2.4
RNU6-840P-201ENST00000517275 C6orf201Q7Z4U5 140 aa0.06□□□□□ -2.4
RNU6-840P-201ENST00000517275 MARF1Q9Y4F3 1742 aaKnown RBP0.06□□□□□ -2.4
RNU6-840P-201ENST00000517275 GVINP1Q7Z2Y8 2422 aa0.06□□□□□ -2.4
RNU6-840P-201ENST00000517275 LPAP08519 4548 aa0.06□□□□□ -2.4
RNU6-840P-201ENST00000517275 NCOR1O75376 2440 aa0.05□□□□□ -2.4
RNU6-840P-201ENST00000517275 FSIP2Q5CZC0 6907 aa0.05□□□□□ -2.4
RNU6-840P-201ENST00000517275 UQCRHLA0A096LP55 91 aa0.05□□□□□ -2.4
RNU6-840P-201ENST00000517275 PSENENQ9NZ42 101 aa0.05□□□□□ -2.4
RNU6-840P-201ENST00000517275 PTPN13Q12923 2485 aa0.05□□□□□ -2.4
RNU6-840P-201ENST00000517275 NLRP1Q9C000 1473 aa0.04□□□□□ -2.4
RNU6-840P-201ENST00000517275 ZNF720Q7Z2F6 126 aa0.04□□□□□ -2.4
RNU6-840P-201ENST00000517275 DEFB107AQ8IZN7 70 aa0.04□□□□□ -2.4
RNU6-840P-201ENST00000517275 HIGD1BQ9P298 99 aa0.04□□□□□ -2.4
RNU6-840P-201ENST00000517275 URB1O60287 2271 aaKnown RBP0.04□□□□□ -2.4
RNU6-840P-201ENST00000517275 KIAA0556O60303 1618 aa0.03□□□□□ -2.4
RNU6-840P-201ENST00000517275 COX8AP10176 69 aa0.03□□□□□ -2.4
RNU6-840P-201ENST00000517275 PYY3Q5JQD4 70 aa0.03□□□□□ -2.4
RNU6-840P-201ENST00000517275 PRKDCP78527 4128 aaKnown RBP0.03□□□□□ -2.4
RNU6-840P-201ENST00000517275 CCDC141Q6ZP82 1450 aa0.03□□□□□ -2.41
RNU6-840P-201ENST00000517275 SLIT1O75093 1534 aa0.03□□□□□ -2.41
RNU6-840P-201ENST00000517275 CUX1P39880 1505 aa0.03□□□□□ -2.41
RNU6-840P-201ENST00000517275 TNXBP22105 4242 aa0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 F8WEM9 126 aa0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 ETDBQ3ZM63 59 aa0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 C20orf78Q9BR46 151 aa0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 BSNQ9UPA5 3926 aa0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 ATP10BO94823 1461 aa0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 SHPRHQ149N8 1683 aa0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 ANKRD26Q9UPS8 1709 aa0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 SPINK4O60575 86 aa0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 GNGT1P63211 74 aa0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 TARBP1Q13395 1621 aaKnown RBP0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 D6R8Y8 96 aa0□□□□□ -2.41
RNU6-840P-201ENST00000517275 PRM1P04553 51 aa0□□□□□ -2.41
RNU6-840P-201ENST00000517275 SPRR2DP22532 72 aa0□□□□□ -2.41
RNU6-840P-201ENST00000517275 ATRQ13535 2644 aa0□□□□□ -2.41
RNU6-840P-201ENST00000517275 SAMD9Q5K651 1589 aa0□□□□□ -2.41
RNU6-840P-201ENST00000517275 MUSTN1Q8IVN3 82 aa0□□□□□ -2.41
RNU6-840P-201ENST00000517275 V9GYS6 101 aa0□□□□□ -2.41
RNU6-840P-201ENST00000517275 SSPOA2VEC9 5147 aa-0□□□□□ -2.41
RNU6-840P-201ENST00000517275 PAPPA2Q9BXP8 1791 aa-0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 CEP162Q5TB80 1403 aa-0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 LEPROTL1O95214 131 aa-0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 SMIM11AP58511 58 aa-0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 CRIPTQ9P021 101 aa-0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 NSD1Q96L73 2696 aaPredicted RBP-0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 KNDC1Q76NI1 1749 aa-0.01□□□□□ -2.41
RNU6-840P-201ENST00000517275 NKTRP30414 1462 aaKnown RBP-0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 IGLC3P0DOY3 106 aa-0.02□□□□□ -2.41
RNU6-840P-201ENST00000517275 UBE2D4Q9Y2X8 147 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms