RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 DNAJC13O75165 2243 aa2.64□□□□□ -1.99
NEDD4-209ENST00000508871 IGHV3-33P01772 117 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 LCE2CQ5TA81 110 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 Q8TAT8 98 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 NDPQ00604 133 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 CFAP126Q5VTH2 177 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 Q6ZTI0 123 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 LINC00474Q9P2X8 69 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 MUC4Q99102 2169 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 MALRD1Q5VYJ5 2156 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 MUC7Q8TAX7 377 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 DMDP11532 3685 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 SPENQ96T58 3664 aaKnown RBP2.63□□□□□ -1.99
NEDD4-209ENST00000508871 TRAV12-1A0A0B4J245 112 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 SDHAF1A6NFY7 115 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 ARMS2P0C7Q2 107 aa2.63□□□□□ -1.99
NEDD4-209ENST00000508871 C2orf70A6NJV1 201 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 Q6ZR54 194 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 CR1P17927 2039 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 A0A087WVE0 104 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 PRB1P04280 392 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 COX17Q14061 63 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 CFAP54Q96N23 3096 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 TRGV4A0A0C4DH28 118 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 BCE1O60756 84 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 ALPK2Q86TB3 2170 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 LINC01549A6NIU2 74 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 ARHGAP32A7KAX9 2087 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 CADP27708 2225 aa2.62□□□□□ -1.99
NEDD4-209ENST00000508871 H3BUX3 64 aa2.61□□□□□ -1.99
NEDD4-209ENST00000508871 RPL37AP61513 92 aaKnown RBP2.61□□□□□ -1.99
NEDD4-209ENST00000508871 TRGV2A0A075B6R0 118 aa2.61□□□□□ -1.99
NEDD4-209ENST00000508871 FP248Q71RG6 208 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-209ENST00000508871 SMAD5-AS1Q9Y6J3 95 aa2.61□□□□□ -1.99
NEDD4-209ENST00000508871 LINC01546A6NGU7 62 aa2.61□□□□□ -1.99
NEDD4-209ENST00000508871 UQCR11O14957 56 aa2.61□□□□□ -1.99
NEDD4-209ENST00000508871 TRBV25-1A0A075B6N4 114 aa2.6□□□□□ -1.99
NEDD4-209ENST00000508871 VCANP13611 3396 aa2.6□□□□□ -1.99
NEDD4-209ENST00000508871 CSAG1Q6PB30 78 aa2.6□□□□□ -1.99
NEDD4-209ENST00000508871 BRD3OSQ6XYD6 125 aa2.6□□□□□ -1.99
NEDD4-209ENST00000508871 CACNA1CQ13936 2221 aa2.6□□□□□ -1.99
NEDD4-209ENST00000508871 Q8N1X5 172 aa2.6□□□□□ -1.99
NEDD4-209ENST00000508871 FLG2Q5D862 2391 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-209ENST00000508871 NCR3O14931 201 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 PRB3Q04118 309 aaPredicted RBP2.59□□□□□ -1.99
NEDD4-209ENST00000508871 Q6ZQY7 126 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 LINC00167Q96N53 147 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 CNFNQ9BYD5 112 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 DOCK11Q5JSL3 2073 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 CFC1P0CG37 223 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 Q6JHZ5 121 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 LOC101927531A0A1B0GV80 90 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 A8MTW9 85 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 C1orf137Q5JT78 98 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 TP53TG3Q9ULZ0 132 aa2.59□□□□□ -1.99
NEDD4-209ENST00000508871 MYO15AQ9UKN7 3530 aa2.59□□□□□ -2
NEDD4-209ENST00000508871 A0A087X002 238 aa2.59□□□□□ -2
NEDD4-209ENST00000508871 G3V318 75 aa2.59□□□□□ -2
NEDD4-209ENST00000508871 IGKV4-1P06312 121 aa2.59□□□□□ -2
NEDD4-209ENST00000508871 ZDBF2Q9HCK1 2354 aa2.59□□□□□ -2
NEDD4-209ENST00000508871 WDR87Q6ZQQ6 2873 aa2.59□□□□□ -2
NEDD4-209ENST00000508871 TRAV22A0A0B4J277 110 aa2.59□□□□□ -2
NEDD4-209ENST00000508871 APELAP0DMC3 54 aa2.59□□□□□ -2
NEDD4-209ENST00000508871 ROMO1P60602 79 aa2.59□□□□□ -2
NEDD4-209ENST00000508871 SSBP3-AS1Q7Z2R9 100 aa2.59□□□□□ -2
NEDD4-209ENST00000508871 PLNP26678 52 aa2.58□□□□□ -2
NEDD4-209ENST00000508871 COA5Q86WW8 74 aa2.58□□□□□ -2
NEDD4-209ENST00000508871 LAMA1P25391 3075 aa2.58□□□□□ -2
NEDD4-209ENST00000508871 KRTAP1-1Q07627 177 aa2.58□□□□□ -2
NEDD4-209ENST00000508871 Q1T7F1 81 aa2.58□□□□□ -2
NEDD4-209ENST00000508871 FRYLO94915 3013 aa2.58□□□□□ -2
NEDD4-209ENST00000508871 K7EMI3 77 aa2.58□□□□□ -2
NEDD4-209ENST00000508871 ABCA1O95477 2261 aa2.58□□□□□ -2
NEDD4-209ENST00000508871 PRRC2AP48634 2157 aaKnown RBP2.58□□□□□ -2
NEDD4-209ENST00000508871 UBE2D4Q9Y2X8 147 aa2.58□□□□□ -2
NEDD4-209ENST00000508871 ZFHX4Q86UP3 3567 aa2.58□□□□□ -2
NEDD4-209ENST00000508871 C20orf166-AS1Q96NR2 134 aa2.57□□□□□ -2
NEDD4-209ENST00000508871 SPINK4O60575 86 aa2.57□□□□□ -2
NEDD4-209ENST00000508871 KRTAP10-9P60411 292 aa2.57□□□□□ -2
NEDD4-209ENST00000508871 NTM-AS1Q6ZSK4 140 aa2.57□□□□□ -2
NEDD4-209ENST00000508871 NDUFA11Q86Y39 141 aa2.57□□□□□ -2
NEDD4-209ENST00000508871 TRBV6-4A0A1B0GX49 114 aa2.57□□□□□ -2
NEDD4-209ENST00000508871 KNL1Q8NG31 2342 aa2.57□□□□□ -2
NEDD4-209ENST00000508871 A8MUU9 505 aa2.57□□□□□ -2
NEDD4-209ENST00000508871 RHPN1-AS1Q9BWJ2 59 aa2.57□□□□□ -2
NEDD4-209ENST00000508871 IGKV2-40A0A087WW87 121 aaPredicted RBP2.56□□□□□ -2
NEDD4-209ENST00000508871 IGKV2D-40P01614 121 aaPredicted RBP2.56□□□□□ -2
NEDD4-209ENST00000508871 UBE2D1P51668 147 aa2.56□□□□□ -2
NEDD4-209ENST00000508871 COL6A3P12111 3177 aa2.56□□□□□ -2
NEDD4-209ENST00000508871 URB1O60287 2271 aaKnown RBP2.56□□□□□ -2
NEDD4-209ENST00000508871 A0A1B0GU69 56 aa2.56□□□□□ -2
NEDD4-209ENST00000508871 A0A1B0GUV1 79 aa2.56□□□□□ -2
NEDD4-209ENST00000508871 LINC00208Q96KT6 92 aa2.56□□□□□ -2
NEDD4-209ENST00000508871 DOPEY2Q9Y3R5 2298 aa2.56□□□□□ -2
NEDD4-209ENST00000508871 IGKV2-29A2NJV5 120 aaPredicted RBP2.56□□□□□ -2
NEDD4-209ENST00000508871 CRIP1P50238 77 aa2.56□□□□□ -2
NEDD4-209ENST00000508871 IGHV3-30P01768 117 aa2.55□□□□□ -2
NEDD4-209ENST00000508871 IGHV3-30-5P0DP03 117 aa2.55□□□□□ -2
NEDD4-209ENST00000508871 LCE2AQ5TA79 106 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms