RNA–Protein interactions for RNA: ENST00000498804.1

TRBVA-201, Transcript of T cell receptor beta variable A (pseudogene), humanhuman

BASIC

Gene TRBVA, Length 316 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVA-201ENST00000498804 CICQ96RK0 1608 aaPredicted RBP0.31□□□□□ -2.36
TRBVA-201ENST00000498804 ALPK2Q86TB3 2170 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 CFAP43Q8NDM7 1665 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 PREX1Q8TCU6 1659 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 LMTK2Q8IWU2 1503 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 LRRC7Q96NW7 1537 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 ZDBF2Q9HCK1 2354 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 TSC2P49815 1807 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 GVQW2A0A096LPI5 108 aaPredicted RBP0.3□□□□□ -2.36
TRBVA-201ENST00000498804 TRBV7-4A0A0J9YYF1 115 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 C7orf77A4D0Y5 90 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 HIGD1CA8MV81 97 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 TMEM14DPA8MWL7 114 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 F2Z2F3 143 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 PDCD5O14737 125 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 ARMS2P0C7Q2 107 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 LINC00032P0C843 101 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 SSBP1Q04837 148 aaKnown RBP0.3□□□□□ -2.36
TRBVA-201ENST00000498804 RPL7L1Q6DKI1 246 aaKnown RBP0.3□□□□□ -2.36
TRBVA-201ENST00000498804 C6orf201Q7Z4U5 140 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 COPS9Q8WXC6 57 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 PLAC4Q8WY50 150 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 LINC01600Q96MT4 127 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 ST20Q9HBF5 79 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 DYNLRB1Q9NP97 96 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 MED9Q9NWA0 146 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 LENEPQ9Y5L5 61 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 LINC01558Q9Y6Z2 57 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 INTS1Q8N201 2190 aaKnown RBP0.3□□□□□ -2.36
TRBVA-201ENST00000498804 PTPN23Q9H3S7 1636 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 DNAJC13O75165 2243 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 RTTNQ86VV8 2226 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 PLIN4Q96Q06 1357 aa0.3□□□□□ -2.36
TRBVA-201ENST00000498804 ATP7BP35670 1465 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 NCOA2Q15596 1464 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 TULP4Q9NRJ4 1543 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 SAMD9Q5K651 1589 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 KDM6BO15054 1643 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 F8VRH5 84 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 K7EIL1 84 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 K7EMI3 77 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 GYPAP02724 150 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 HMGN2P05204 90 aaKnown RBP0.29□□□□□ -2.36
TRBVA-201ENST00000498804 ACYP2P14621 99 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 HMGA1P17096 107 aaKnown RBP0.29□□□□□ -2.36
TRBVA-201ENST00000498804 DEFB112Q30KQ8 113 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 C6orf52Q5T4I8 152 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 UNQ6190/PRO20217Q6UXQ8 127 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 HEPN1Q6WQI6 88 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 Q6ZQY7 126 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 LINC00299Q6ZSB3 139 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 C18orf32Q8TCD1 76 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 TJP1Q07157 1748 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 JMJD1CQ15652 2540 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 IQSEC2Q5JU85 1478 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 CNTRLQ7Z7A1 2325 aa0.29□□□□□ -2.36
TRBVA-201ENST00000498804 EFCAB5A4FU69 1503 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 KCPQ6ZWJ8 1503 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 ZNF462Q96JM2 2506 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 QSER1Q2KHR3 1735 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 CACNA1CQ13936 2221 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 ASXL3Q9C0F0 2248 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 FXYD6-FXYD2A0A087WZ82 144 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 CTXND1A0A1B0GTU2 59 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 A6NIN4 97 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 BCE1O60756 84 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 IFI6P09912 130 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 RPL37P61927 97 aaKnown RBP0.28□□□□□ -2.36
TRBVA-201ENST00000498804 PSMG4Q5JS54 123 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 C10orf113Q5VZT2 155 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 UBE2D4Q9Y2X8 147 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 V9GYV3 84 aa0.28□□□□□ -2.36
TRBVA-201ENST00000498804 HFM1A2PYH4 1435 aa0.28□□□□□ -2.37
TRBVA-201ENST00000498804 CLASP1Q7Z460 1538 aa0.28□□□□□ -2.37
TRBVA-201ENST00000498804 ABCA10Q8WWZ4 1543 aa0.28□□□□□ -2.37
TRBVA-201ENST00000498804 TECTAO75443 2155 aa0.28□□□□□ -2.37
TRBVA-201ENST00000498804 KIAA0556O60303 1618 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 RNF17Q9BXT8 1623 aaKnown RBP0.27□□□□□ -2.37
TRBVA-201ENST00000498804 ALS2Q96Q42 1657 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 A0A0D9SG42 100 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 TRBV30A0A0K0K1B3 111 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 MYMXA0A1B0GTQ4 84 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 I3L2K1 104 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 CAV3P56539 151 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 DEFB121Q5J5C9 76 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 SPATA8Q6RVD6 105 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 Q6ZRX8 168 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 LINC00643Q86TS7 51 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 BAGE2Q86Y30 109 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 NDUFA11Q86Y39 141 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 S100A13Q99584 98 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 SMCO4Q9NRQ5 59 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 TMEM14CQ9P0S9 112 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 ANKARQ7Z5J8 1434 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 LRRC9Q6ZRR7 1453 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 PLXNC1O60486 1568 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 TIAM1Q13009 1591 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 LRRC37A2A6NM11 1700 aa0.27□□□□□ -2.37
TRBVA-201ENST00000498804 CSMD3Q7Z407 3707 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms