RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TRBV6-1A0A0K0K1D8 114 aa2.54□□□□□ -2
BRCA1-220ENST00000492859 KRTAP5-9P26371 169 aa2.54□□□□□ -2
BRCA1-220ENST00000492859 LINC00322Q6ZN03 302 aaPredicted RBP2.54□□□□□ -2
BRCA1-220ENST00000492859 PATE1Q8WXA2 126 aa2.54□□□□□ -2
BRCA1-220ENST00000492859 ALPK2Q86TB3 2170 aa2.53□□□□□ -2
BRCA1-220ENST00000492859 UQCR11O14957 56 aa2.53□□□□□ -2
BRCA1-220ENST00000492859 MRGPRG-AS1Q2M3A8 158 aa2.53□□□□□ -2
BRCA1-220ENST00000492859 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
BRCA1-220ENST00000492859 TNCP24821 2201 aa2.53□□□□□ -2
BRCA1-220ENST00000492859 ZNF318Q5VUA4 2279 aa2.53□□□□□ -2
BRCA1-220ENST00000492859 ZNF861PO60384 105 aa2.53□□□□□ -2.01
BRCA1-220ENST00000492859 IGLV3-19P01714 112 aa2.53□□□□□ -2.01
BRCA1-220ENST00000492859 IGLV3-1P01715 115 aa2.53□□□□□ -2.01
BRCA1-220ENST00000492859 MGPP08493 103 aa2.53□□□□□ -2.01
BRCA1-220ENST00000492859 RNASE3P12724 160 aaKnown RBP2.53□□□□□ -2.01
BRCA1-220ENST00000492859 NDPQ00604 133 aa2.53□□□□□ -2.01
BRCA1-220ENST00000492859 ADAMTS9Q9P2N4 1935 aa2.53□□□□□ -2.01
BRCA1-220ENST00000492859 A0A087WTM6 91 aa2.52□□□□□ -2.01
BRCA1-220ENST00000492859 NDUFA3O95167 84 aa2.52□□□□□ -2.01
BRCA1-220ENST00000492859 C10orf113Q5VZT2 155 aa2.52□□□□□ -2.01
BRCA1-220ENST00000492859 WFDC10AQ9H1F0 79 aa2.52□□□□□ -2.01
BRCA1-220ENST00000492859 PDE6GP18545 87 aa2.51□□□□□ -2.01
BRCA1-220ENST00000492859 JMJD7-PLA2G4BH0Y9G9 81 aa2.5□□□□□ -2.01
BRCA1-220ENST00000492859 ZNF625Q96I27 306 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-220ENST00000492859 GAFA1Q96PS6 74 aa2.5□□□□□ -2.01
BRCA1-220ENST00000492859 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
BRCA1-220ENST00000492859 KLK9Q9UKQ9 250 aa2.5□□□□□ -2.01
BRCA1-220ENST00000492859 ZFHX2Q9C0A1 2572 aaPredicted RBP2.5□□□□□ -2.01
BRCA1-220ENST00000492859 LINC00959A0A1B0GUT2 108 aa2.49□□□□□ -2.01
BRCA1-220ENST00000492859 MRPS21P82921 87 aaKnown RBP2.49□□□□□ -2.01
BRCA1-220ENST00000492859 SPINK14Q6IE38 97 aa2.49□□□□□ -2.01
BRCA1-220ENST00000492859 TMEM167BQ9NRX6 74 aa2.49□□□□□ -2.01
BRCA1-220ENST00000492859 DEFB112Q30KQ8 113 aa2.49□□□□□ -2.01
BRCA1-220ENST00000492859 SPINT4Q6UDR6 99 aa2.49□□□□□ -2.01
BRCA1-220ENST00000492859 RPS27LQ71UM5 84 aaKnown RBP2.49□□□□□ -2.01
BRCA1-220ENST00000492859 R4GN34 69 aa2.49□□□□□ -2.01
BRCA1-220ENST00000492859 NBDYA0A0U1RRE5 68 aa2.48□□□□□ -2.01
BRCA1-220ENST00000492859 NDUFA4O00483 81 aa2.48□□□□□ -2.01
BRCA1-220ENST00000492859 LINC00472Q9H8W2 130 aa2.48□□□□□ -2.01
BRCA1-220ENST00000492859 TRGV4A0A0C4DH28 118 aa2.47□□□□□ -2.01
BRCA1-220ENST00000492859 IGKV3-15P01624 115 aa2.47□□□□□ -2.01
BRCA1-220ENST00000492859 COA5Q86WW8 74 aa2.47□□□□□ -2.01
BRCA1-220ENST00000492859 PSORS1C2Q9UIG4 136 aa2.47□□□□□ -2.01
BRCA1-220ENST00000492859 CACNA1CQ13936 2221 aa2.47□□□□□ -2.01
BRCA1-220ENST00000492859 TRBV6-4A0A1B0GX49 114 aa2.46□□□□□ -2.02
BRCA1-220ENST00000492859 Q6ZTI0 123 aa2.46□□□□□ -2.02
BRCA1-220ENST00000492859 DEFB132Q7Z7B7 95 aa2.46□□□□□ -2.02
BRCA1-220ENST00000492859 LINC00612Q8N6U2 182 aa2.46□□□□□ -2.02
BRCA1-220ENST00000492859 C4orf3Q8WVX3 66 aa2.46□□□□□ -2.02
BRCA1-220ENST00000492859 MED13LQ71F56 2210 aa2.45□□□□□ -2.02
BRCA1-220ENST00000492859 IGKV2-40A0A087WW87 121 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-220ENST00000492859 A0A087WYN8 130 aa2.45□□□□□ -2.02
BRCA1-220ENST00000492859 IGKV2D-40P01614 121 aaPredicted RBP2.45□□□□□ -2.02
BRCA1-220ENST00000492859 HAMPP81172 84 aa2.45□□□□□ -2.02
BRCA1-220ENST00000492859 DEFB114Q30KQ6 69 aa2.45□□□□□ -2.02
BRCA1-220ENST00000492859 IGLV4-69A0A075B6H9 119 aa2.44□□□□□ -2.02
BRCA1-220ENST00000492859 LOC110117498A0A087WWA1 95 aa2.44□□□□□ -2.02
BRCA1-220ENST00000492859 RPL38P63173 70 aaKnown RBP2.44□□□□□ -2.02
BRCA1-220ENST00000492859 TFF3Q07654 80 aa2.44□□□□□ -2.02
BRCA1-220ENST00000492859 Q96NJ1 140 aa2.44□□□□□ -2.02
BRCA1-220ENST00000492859 SEC16AO15027 2179 aa2.44□□□□□ -2.02
BRCA1-220ENST00000492859 TNRC6CQ9HCJ0 1690 aaKnown RBP2.44□□□□□ -2.02
BRCA1-220ENST00000492859 IGKV2-29A2NJV5 120 aaPredicted RBP2.44□□□□□ -2.02
BRCA1-220ENST00000492859 NCR3O14931 201 aa2.44□□□□□ -2.02
BRCA1-220ENST00000492859 BRWD1Q9NSI6 2320 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 IGLV4-60A0A075B6I1 120 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 TRGV2A0A075B6R0 118 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 A0A0J9YWU9 116 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 A0A1W2PNN7 141 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 H0YGX0 51 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 IGKV4-1P06312 121 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 RPL37AP61513 92 aaKnown RBP2.43□□□□□ -2.02
BRCA1-220ENST00000492859 TPRXLQ17RH7 258 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 C5orf56Q8N8D9 126 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 LINC00304Q8N9R0 145 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 SPACA4Q8TDM5 124 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 KCNQ1DNQ9H478 68 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 CCL26Q9Y258 94 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 F5P12259 2224 aa2.43□□□□□ -2.02
BRCA1-220ENST00000492859 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.42□□□□□ -2.02
BRCA1-220ENST00000492859 TRGV1A0A0A0MS02 117 aa2.42□□□□□ -2.02
BRCA1-220ENST00000492859 A0A0G2JQZ4 141 aa2.42□□□□□ -2.02
BRCA1-220ENST00000492859 ETDCA0A1B0GVM5 59 aa2.42□□□□□ -2.02
BRCA1-220ENST00000492859 PRB2P02812 416 aaPredicted RBP2.42□□□□□ -2.02
BRCA1-220ENST00000492859 IAPPP10997 89 aa2.41□□□□□ -2.02
BRCA1-220ENST00000492859 COX17Q14061 63 aa2.41□□□□□ -2.02
BRCA1-220ENST00000492859 KMT2BQ9UMN6 2715 aaPredicted RBP2.41□□□□□ -2.02
BRCA1-220ENST00000492859 CPSF4LA6NMK7 179 aaKnown RBP2.4□□□□□ -2.02
BRCA1-220ENST00000492859 A0A1B0GU69 56 aa2.4□□□□□ -2.03
BRCA1-220ENST00000492859 HRES1P13985 223 aa2.4□□□□□ -2.03
BRCA1-220ENST00000492859 COX7BP24311 80 aa2.4□□□□□ -2.03
BRCA1-220ENST00000492859 KRTAP24-1Q3LI83 254 aa2.4□□□□□ -2.03
BRCA1-220ENST00000492859 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
BRCA1-220ENST00000492859 LY6EQ16553 131 aa2.39□□□□□ -2.03
BRCA1-220ENST00000492859 TTTY10Q9BZA0 68 aa2.39□□□□□ -2.03
BRCA1-220ENST00000492859 PRB1P04280 392 aa2.38□□□□□ -2.03
BRCA1-220ENST00000492859 ARHGAP5-AS1Q96IT6 56 aa2.38□□□□□ -2.03
BRCA1-220ENST00000492859 BPTFQ12830 3046 aa2.37□□□□□ -2.03
BRCA1-220ENST00000492859 IGLV6-57P01721 117 aa2.37□□□□□ -2.03
BRCA1-220ENST00000492859 FXYD4P59646 89 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms