RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 C10orf113Q5VZT2 155 aa1.24□□□□□ -2.21
VPS36-205ENST00000492650 C6orf201Q7Z4U5 140 aa1.24□□□□□ -2.21
VPS36-205ENST00000492650 S100ZQ8WXG8 99 aa1.24□□□□□ -2.21
VPS36-205ENST00000492650 SETBP1Q9Y6X0 1596 aa1.24□□□□□ -2.21
VPS36-205ENST00000492650 ATP7BP35670 1465 aa1.24□□□□□ -2.21
VPS36-205ENST00000492650 C1orf167Q5SNV9 1468 aa1.24□□□□□ -2.21
VPS36-205ENST00000492650 SSC5DA1L4H1 1573 aa1.23□□□□□ -2.21
VPS36-205ENST00000492650 TRBV7-4A0A0J9YYF1 115 aa1.23□□□□□ -2.21
VPS36-205ENST00000492650 PIN1P1O15428 100 aa1.23□□□□□ -2.21
VPS36-205ENST00000492650 SPINK7P58062 85 aa1.23□□□□□ -2.21
VPS36-205ENST00000492650 ATP5EP2Q5VTU8 51 aa1.23□□□□□ -2.21
VPS36-205ENST00000492650 LAMA4Q16363 1823 aa1.23□□□□□ -2.21
VPS36-205ENST00000492650 LTN1O94822 1766 aa1.23□□□□□ -2.21
VPS36-205ENST00000492650 LRRC37A2A6NM11 1700 aa1.23□□□□□ -2.21
VPS36-205ENST00000492650 MROH1Q8NDA8 1641 aa1.22□□□□□ -2.21
VPS36-205ENST00000492650 MAP2P11137 1827 aaKnown RBP1.22□□□□□ -2.21
VPS36-205ENST00000492650 RGPD8O14715 1765 aaPredicted RBP1.22□□□□□ -2.21
VPS36-205ENST00000492650 RGPD5Q99666 1765 aa1.22□□□□□ -2.21
VPS36-205ENST00000492650 A0A1B0GUT8 65 aa1.22□□□□□ -2.21
VPS36-205ENST00000492650 GNGT1P63211 74 aa1.22□□□□□ -2.21
VPS36-205ENST00000492650 NUP188Q5SRE5 1749 aa1.22□□□□□ -2.21
VPS36-205ENST00000492650 NKTRP30414 1462 aaKnown RBP1.22□□□□□ -2.21
VPS36-205ENST00000492650 HFM1A2PYH4 1435 aa1.22□□□□□ -2.21
VPS36-205ENST00000492650 INO80Q9ULG1 1556 aaPredicted RBP1.21□□□□□ -2.22
VPS36-205ENST00000492650 RGPD2P0DJD1 1756 aa1.21□□□□□ -2.22
VPS36-205ENST00000492650 SCN11AQ9UI33 1791 aa1.21□□□□□ -2.22
VPS36-205ENST00000492650 EFCAB5A4FU69 1503 aa1.21□□□□□ -2.22
VPS36-205ENST00000492650 SHPRHQ149N8 1683 aa1.21□□□□□ -2.22
VPS36-205ENST00000492650 A0A087WWC5 75 aa1.21□□□□□ -2.22
VPS36-205ENST00000492650 TRBV6-1A0A0K0K1D8 114 aa1.21□□□□□ -2.22
VPS36-205ENST00000492650 J3QKU1 62 aa1.21□□□□□ -2.22
VPS36-205ENST00000492650 K7EIL1 84 aa1.21□□□□□ -2.22
VPS36-205ENST00000492650 IFI27P40305 119 aaPredicted RBP1.21□□□□□ -2.22
VPS36-205ENST00000492650 KNDC1Q76NI1 1749 aa1.2□□□□□ -2.22
VPS36-205ENST00000492650 URB2Q14146 1524 aaKnown RBP1.2□□□□□ -2.22
VPS36-205ENST00000492650 CNTRLQ7Z7A1 2325 aa1.2□□□□□ -2.22
VPS36-205ENST00000492650 MADDQ8WXG6 1647 aa1.2□□□□□ -2.22
VPS36-205ENST00000492650 ALKQ9UM73 1620 aa1.2□□□□□ -2.22
VPS36-205ENST00000492650 A0A087WXM4 84 aa1.2□□□□□ -2.22
VPS36-205ENST00000492650 LYNX1P0DP58 116 aa1.2□□□□□ -2.22
VPS36-205ENST00000492650 HAMPP81172 84 aa1.2□□□□□ -2.22
VPS36-205ENST00000492650 SAMD9Q5K651 1589 aa1.2□□□□□ -2.22
VPS36-205ENST00000492650 ASXL3Q9C0F0 2248 aa1.2□□□□□ -2.22
VPS36-205ENST00000492650 KMT2BQ9UMN6 2715 aaPredicted RBP1.19□□□□□ -2.22
VPS36-205ENST00000492650 NHSL1Q5SYE7 1610 aa1.19□□□□□ -2.22
VPS36-205ENST00000492650 KDM3BQ7LBC6 1761 aa1.19□□□□□ -2.22
VPS36-205ENST00000492650 CACNA1CQ13936 2221 aa1.19□□□□□ -2.22
VPS36-205ENST00000492650 CEP170BQ9Y4F5 1589 aaPredicted RBP1.19□□□□□ -2.22
VPS36-205ENST00000492650 CRYBG1Q9Y4K1 1723 aa1.19□□□□□ -2.22
VPS36-205ENST00000492650 TARBP1Q13395 1621 aaKnown RBP1.18□□□□□ -2.22
VPS36-205ENST00000492650 CD163L1Q9NR16 1453 aa1.18□□□□□ -2.22
VPS36-205ENST00000492650 ANKRD17O75179 2603 aaKnown RBP1.18□□□□□ -2.22
VPS36-205ENST00000492650 COX8AP10176 69 aa1.18□□□□□ -2.22
VPS36-205ENST00000492650 FXYD6P3P58550 94 aa1.18□□□□□ -2.22
VPS36-205ENST00000492650 ASXL1Q8IXJ9 1541 aa1.18□□□□□ -2.22
VPS36-205ENST00000492650 CADP27708 2225 aa1.17□□□□□ -2.22
VPS36-205ENST00000492650 C5P01031 1676 aa1.17□□□□□ -2.22
VPS36-205ENST00000492650 A0A1B0GU69 56 aa1.17□□□□□ -2.22
VPS36-205ENST00000492650 NDUFB1O75438 58 aa1.17□□□□□ -2.22
VPS36-205ENST00000492650 JMJD1CQ15652 2540 aa1.17□□□□□ -2.22
VPS36-205ENST00000492650 THOC2Q8NI27 1593 aaKnown RBP1.17□□□□□ -2.22
VPS36-205ENST00000492650 SORL1Q92673 2214 aa1.16□□□□□ -2.22
VPS36-205ENST00000492650 PIK3C2BO00750 1634 aa1.16□□□□□ -2.22
VPS36-205ENST00000492650 XRN1Q8IZH2 1706 aaKnown RBP1.16□□□□□ -2.22
VPS36-205ENST00000492650 S100A3P33764 101 aa1.16□□□□□ -2.22
VPS36-205ENST00000492650 UBE2DNLQ8IWF7 75 aa1.16□□□□□ -2.22
VPS36-205ENST00000492650 HILPDAQ9Y5L2 63 aa1.16□□□□□ -2.22
VPS36-205ENST00000492650 ARFGEF2Q9Y6D5 1785 aa1.16□□□□□ -2.22
VPS36-205ENST00000492650 NAV3Q8IVL0 2385 aa1.15□□□□□ -2.22
VPS36-205ENST00000492650 TRAV21A0A0B4J279 112 aa1.15□□□□□ -2.23
VPS36-205ENST00000492650 ANGP03950 147 aaKnown RBP1.15□□□□□ -2.23
VPS36-205ENST00000492650 IFI6P09912 130 aa1.15□□□□□ -2.23
VPS36-205ENST00000492650 DEFB112Q30KQ8 113 aa1.15□□□□□ -2.23
VPS36-205ENST00000492650 SSBP3-AS1Q7Z2R9 100 aa1.15□□□□□ -2.23
VPS36-205ENST00000492650 RGPD1P0DJD0 1748 aa1.15□□□□□ -2.23
VPS36-205ENST00000492650 RP1L1Q8IWN7 2480 aaPredicted RBP1.14□□□□□ -2.23
VPS36-205ENST00000492650 AHCTF1Q8WYP5 2266 aa1.14□□□□□ -2.23
VPS36-205ENST00000492650 H3BVH4 76 aa1.14□□□□□ -2.23
VPS36-205ENST00000492650 HMGA1P17096 107 aaKnown RBP1.14□□□□□ -2.23
VPS36-205ENST00000492650 LRP6O75581 1613 aa1.14□□□□□ -2.23
VPS36-205ENST00000492650 USP32Q8NFA0 1604 aa1.14□□□□□ -2.23
VPS36-205ENST00000492650 PAPPA2Q9BXP8 1791 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 GOLGA4Q13439 2230 aaKnown RBP1.13□□□□□ -2.23
VPS36-205ENST00000492650 CDC42BPGQ6DT37 1551 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 LINC00959A0A1B0GUT2 108 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 SFTA3P0C7M3 94 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 Q6ZSA8 131 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 GAFA1Q96PS6 74 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 LRRC7Q96NW7 1537 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 TENM1Q9UKZ4 2725 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 ANKRD50Q9ULJ7 1429 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 ANKRD36A6QL64 1941 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 ERCC6L2Q5T890 1561 aa1.13□□□□□ -2.23
VPS36-205ENST00000492650 ITSN1Q15811 1721 aa1.12□□□□□ -2.23
VPS36-205ENST00000492650 ABCA9Q8IUA7 1624 aa1.12□□□□□ -2.23
VPS36-205ENST00000492650 SLIT1O75093 1534 aa1.12□□□□□ -2.23
VPS36-205ENST00000492650 TULP4Q9NRJ4 1543 aa1.12□□□□□ -2.23
VPS36-205ENST00000492650 FXYD6-FXYD2A0A087WZ82 144 aa1.12□□□□□ -2.23
VPS36-205ENST00000492650 C3orf79P0CE67 100 aa1.12□□□□□ -2.23
VPS36-205ENST00000492650 WFDC9Q8NEX5 89 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms