RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 SERF2P84101 59 aa2.15□□□□□ -2.07
FXN-204ENST00000484259 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
FXN-204ENST00000484259 ZNF563Q8TA94 476 aa2.15□□□□□ -2.07
FXN-204ENST00000484259 SEC16AO15027 2179 aa2.15□□□□□ -2.07
FXN-204ENST00000484259 FAM208BQ5VWN6 2430 aa2.15□□□□□ -2.07
FXN-204ENST00000484259 ANKRD11Q6UB99 2663 aaPredicted RBP2.14□□□□□ -2.07
FXN-204ENST00000484259 IGF2RP11717 2491 aa2.14□□□□□ -2.07
FXN-204ENST00000484259 ARID1AO14497 2285 aa2.14□□□□□ -2.07
FXN-204ENST00000484259 IGKV3-7A0A075B6H7 116 aa2.14□□□□□ -2.07
FXN-204ENST00000484259 TRAV1-2A0A0B4J238 106 aa2.14□□□□□ -2.07
FXN-204ENST00000484259 F8VRH5 84 aa2.14□□□□□ -2.07
FXN-204ENST00000484259 WISP3O95389 354 aaPredicted RBP2.14□□□□□ -2.07
FXN-204ENST00000484259 FCER1GP30273 86 aa2.14□□□□□ -2.07
FXN-204ENST00000484259 SNRPGP62308 76 aaKnown RBP2.14□□□□□ -2.07
FXN-204ENST00000484259 U3KQA8 63 aa2.14□□□□□ -2.07
FXN-204ENST00000484259 ANKRD12Q6UB98 2062 aa2.14□□□□□ -2.07
FXN-204ENST00000484259 SPTA1P02549 2419 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 PTPRQQ9UMZ3 2332 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 MGPP08493 103 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 CCL3L1P16619 93 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 PLNP26678 52 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 CCL18P55774 89 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 KIF26BQ2KJY2 2108 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 MRGPRG-AS1Q2M3A8 158 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 SPINT4Q6UDR6 99 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 MED12LQ86YW9 2145 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 C9orf163Q8N9P6 203 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 COX7B2Q8TF08 81 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 PATE1Q8WXA2 126 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 LINC00846Q9NV44 126 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 LINC01558Q9Y6Z2 57 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 WDR87Q6ZQQ6 2873 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 PKD1L2Q7Z442 2459 aa2.13□□□□□ -2.07
FXN-204ENST00000484259 RP1L1Q8IWN7 2480 aaPredicted RBP2.13□□□□□ -2.07
FXN-204ENST00000484259 WDFY4Q6ZS81 3184 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 IGKV3D-7A0A0C4DH55 119 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 SMIM27A0A1W2PRY6 76 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 CCL22O00626 93 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 UQCR11O14957 56 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 NREPQ16612 68 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 Q6ZTI0 123 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 PRO2289Q9P1D8 64 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 SPTBP11277 2137 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 CNTRLQ7Z7A1 2325 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 CACNA1GO43497 2377 aa2.12□□□□□ -2.07
FXN-204ENST00000484259 COL6A6A6NMZ7 2263 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 USP24Q9UPU5 2620 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 KIAA2026Q5HYC2 2103 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 ZNF861PO60384 105 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 IGKV2-30P06310 120 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 CTSGP08311 255 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 PDE6GP18545 87 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 CAV3P56539 151 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 LCE1EQ5T753 118 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 HCP5Q6MZN7 132 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 FDCSPQ8NFU4 85 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 TMEM263Q8WUH6 116 aaKnown RBP2.11□□□□□ -2.07
FXN-204ENST00000484259 TTTY12Q9BZ98 90 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 UBL5Q9BZL1 73 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 PLAC8Q9NZF1 115 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 HEATR5BQ9P2D3 2071 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 CFAP54Q96N23 3096 aa2.11□□□□□ -2.07
FXN-204ENST00000484259 SDK2Q58EX2 2172 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 MDC1Q14676 2089 aaKnown RBP2.1□□□□□ -2.07
FXN-204ENST00000484259 COL27A1Q8IZC6 1860 aaPredicted RBP2.1□□□□□ -2.07
FXN-204ENST00000484259 CTXND1A0A1B0GTU2 59 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 A0A1W2PNU3 283 aaPredicted RBP2.1□□□□□ -2.07
FXN-204ENST00000484259 H0Y9P7 68 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 M0R135 149 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 M0R3E3 92 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 LY6EQ16553 131 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 LINC00208Q96KT6 92 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 WFDC6Q9BQY6 131 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 V9GYV3 84 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 ATRXP46100 2492 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 VPS13AQ96RL7 3174 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 ZFYVE26Q68DK2 2539 aa2.1□□□□□ -2.07
FXN-204ENST00000484259 PLXNB1O43157 2135 aa2.09□□□□□ -2.07
FXN-204ENST00000484259 SNRNP200O75643 2136 aaKnown RBP2.09□□□□□ -2.07
FXN-204ENST00000484259 TLN1Q9Y490 2541 aaKnown RBP2.09□□□□□ -2.07
FXN-204ENST00000484259 LCE6AA0A183 80 aa2.09□□□□□ -2.07
FXN-204ENST00000484259 TRBV6-4A0A1B0GX49 114 aa2.09□□□□□ -2.07
FXN-204ENST00000484259 JMJD7-PLA2G4BH0Y9G9 81 aa2.09□□□□□ -2.07
FXN-204ENST00000484259 H0YGG7 62 aa2.09□□□□□ -2.07
FXN-204ENST00000484259 DEFB109BQ30KR1 87 aa2.09□□□□□ -2.07
FXN-204ENST00000484259 KLK9Q9UKQ9 250 aa2.09□□□□□ -2.07
FXN-204ENST00000484259 DOCK11Q5JSL3 2073 aa2.09□□□□□ -2.07
FXN-204ENST00000484259 USP34Q70CQ2 3546 aa2.09□□□□□ -2.08
FXN-204ENST00000484259 CHD6Q8TD26 2715 aa2.09□□□□□ -2.08
FXN-204ENST00000484259 FASNP49327 2511 aaKnown RBP2.09□□□□□ -2.08
FXN-204ENST00000484259 KMT2BQ9UMN6 2715 aaPredicted RBP2.08□□□□□ -2.08
FXN-204ENST00000484259 IGKV3OR2-268A0A0C4DH90 116 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 COX17Q14061 63 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 DEFB110Q30KQ9 67 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 OBSCN-AS1Q96MR7 158 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 R4GN34 69 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 DMXL1Q9Y485 3027 aa2.08□□□□□ -2.08
FXN-204ENST00000484259 SCN3AQ9NY46 2000 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms