RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 KNTC1P50748 2209 aa2.81□□□□□ -1.96
RBM39-233ENST00000482563 CEP170BQ9Y4F5 1589 aaPredicted RBP2.81□□□□□ -1.96
RBM39-233ENST00000482563 GCHFRP30047 84 aa2.81□□□□□ -1.96
RBM39-233ENST00000482563 Q6JHZ5 121 aa2.81□□□□□ -1.96
RBM39-233ENST00000482563 TARBP1Q13395 1621 aaKnown RBP2.81□□□□□ -1.96
RBM39-233ENST00000482563 ANKRD36A6QL64 1941 aa2.8□□□□□ -1.96
RBM39-233ENST00000482563 INO80Q9ULG1 1556 aaPredicted RBP2.79□□□□□ -1.96
RBM39-233ENST00000482563 LYNX1P0DP58 116 aa2.79□□□□□ -1.96
RBM39-233ENST00000482563 C5P01031 1676 aa2.79□□□□□ -1.96
RBM39-233ENST00000482563 ALKQ9UM73 1620 aa2.79□□□□□ -1.96
RBM39-233ENST00000482563 PAPPA2Q9BXP8 1791 aa2.79□□□□□ -1.96
RBM39-233ENST00000482563 TRBV7-4A0A0J9YYF1 115 aa2.79□□□□□ -1.96
RBM39-233ENST00000482563 ATP7BP35670 1465 aa2.79□□□□□ -1.96
RBM39-233ENST00000482563 ITSN1Q15811 1721 aa2.78□□□□□ -1.96
RBM39-233ENST00000482563 ANKRD17O75179 2603 aaKnown RBP2.78□□□□□ -1.96
RBM39-233ENST00000482563 SETBP1Q9Y6X0 1596 aa2.78□□□□□ -1.96
RBM39-233ENST00000482563 ZNF831Q5JPB2 1677 aa2.77□□□□□ -1.97
RBM39-233ENST00000482563 KMT2BQ9UMN6 2715 aaPredicted RBP2.77□□□□□ -1.97
RBM39-233ENST00000482563 K7EIL1 84 aa2.77□□□□□ -1.97
RBM39-233ENST00000482563 DEFB119Q8N690 84 aa2.77□□□□□ -1.97
RBM39-233ENST00000482563 SORL1Q92673 2214 aa2.77□□□□□ -1.97
RBM39-233ENST00000482563 CNTRLQ7Z7A1 2325 aa2.77□□□□□ -1.97
RBM39-233ENST00000482563 UMAD1C9J7I0 102 aa2.76□□□□□ -1.97
RBM39-233ENST00000482563 ASXL3Q9C0F0 2248 aa2.76□□□□□ -1.97
RBM39-233ENST00000482563 HAMPP81172 84 aa2.75□□□□□ -1.97
RBM39-233ENST00000482563 GNGT1P63211 74 aa2.73□□□□□ -1.97
RBM39-233ENST00000482563 RGPD1P0DJD0 1748 aa2.73□□□□□ -1.97
RBM39-233ENST00000482563 S100A3P33764 101 aa2.73□□□□□ -1.97
RBM39-233ENST00000482563 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
RBM39-233ENST00000482563 PIK3C2BO00750 1634 aa2.73□□□□□ -1.97
RBM39-233ENST00000482563 HIVEP2P31629 2446 aa2.72□□□□□ -1.97
RBM39-233ENST00000482563 CD163L1Q9NR16 1453 aa2.72□□□□□ -1.97
RBM39-233ENST00000482563 J3QKU1 62 aa2.72□□□□□ -1.97
RBM39-233ENST00000482563 SAMD9Q5K651 1589 aa2.72□□□□□ -1.97
RBM39-233ENST00000482563 EFCAB5A4FU69 1503 aa2.71□□□□□ -1.98
RBM39-233ENST00000482563 ASXL1Q8IXJ9 1541 aa2.71□□□□□ -1.98
RBM39-233ENST00000482563 PLXNB2O15031 1838 aa2.7□□□□□ -1.98
RBM39-233ENST00000482563 PKD1L3Q7Z443 1732 aa2.7□□□□□ -1.98
RBM39-233ENST00000482563 XRN1Q8IZH2 1706 aaKnown RBP2.7□□□□□ -1.98
RBM39-233ENST00000482563 A0A1B0GUT8 65 aa2.7□□□□□ -1.98
RBM39-233ENST00000482563 LRP6O75581 1613 aa2.69□□□□□ -1.98
RBM39-233ENST00000482563 JMJD1CQ15652 2540 aa2.69□□□□□ -1.98
RBM39-233ENST00000482563 ATP5EP2Q5VTU8 51 aa2.68□□□□□ -1.98
RBM39-233ENST00000482563 S100ZQ8WXG8 99 aa2.68□□□□□ -1.98
RBM39-233ENST00000482563 TRBV6-1A0A0K0K1D8 114 aa2.68□□□□□ -1.98
RBM39-233ENST00000482563 IFI27P40305 119 aaPredicted RBP2.68□□□□□ -1.98
RBM39-233ENST00000482563 HILPDAQ9Y5L2 63 aa2.68□□□□□ -1.98
RBM39-233ENST00000482563 LAMC1P11047 1609 aa2.67□□□□□ -1.98
RBM39-233ENST00000482563 NKTRP30414 1462 aaKnown RBP2.67□□□□□ -1.98
RBM39-233ENST00000482563 THOC2Q8NI27 1593 aaKnown RBP2.67□□□□□ -1.98
RBM39-233ENST00000482563 URB2Q14146 1524 aaKnown RBP2.66□□□□□ -1.98
RBM39-233ENST00000482563 USP32Q8NFA0 1604 aa2.66□□□□□ -1.98
RBM39-233ENST00000482563 RP1L1Q8IWN7 2480 aaPredicted RBP2.66□□□□□ -1.98
RBM39-233ENST00000482563 A0A087WXM4 84 aa2.66□□□□□ -1.98
RBM39-233ENST00000482563 PIN1P1O15428 100 aa2.66□□□□□ -1.98
RBM39-233ENST00000482563 HFM1A2PYH4 1435 aa2.65□□□□□ -1.98
RBM39-233ENST00000482563 A0A1B0GU69 56 aa2.65□□□□□ -1.99
RBM39-233ENST00000482563 LINC00959A0A1B0GUT2 108 aa2.65□□□□□ -1.99
RBM39-233ENST00000482563 A0A087WWC5 75 aa2.64□□□□□ -1.99
RBM39-233ENST00000482563 SLIT1O75093 1534 aa2.64□□□□□ -1.99
RBM39-233ENST00000482563 IFI6P09912 130 aa2.64□□□□□ -1.99
RBM39-233ENST00000482563 SSBP3-AS1Q7Z2R9 100 aa2.64□□□□□ -1.99
RBM39-233ENST00000482563 ABCA9Q8IUA7 1624 aa2.63□□□□□ -1.99
RBM39-233ENST00000482563 COX8AP10176 69 aa2.63□□□□□ -1.99
RBM39-233ENST00000482563 CDC42BPGQ6DT37 1551 aa2.63□□□□□ -1.99
RBM39-233ENST00000482563 COL6A6A6NMZ7 2263 aa2.63□□□□□ -1.99
RBM39-233ENST00000482563 TRAV21A0A0B4J279 112 aa2.62□□□□□ -1.99
RBM39-233ENST00000482563 HMGA1P17096 107 aaKnown RBP2.62□□□□□ -1.99
RBM39-233ENST00000482563 Q6ZSA8 131 aa2.62□□□□□ -1.99
RBM39-233ENST00000482563 LRRC7Q96NW7 1537 aa2.61□□□□□ -1.99
RBM39-233ENST00000482563 NAV3Q8IVL0 2385 aa2.6□□□□□ -1.99
RBM39-233ENST00000482563 UBE2DNLQ8IWF7 75 aa2.6□□□□□ -1.99
RBM39-233ENST00000482563 H3BVH4 76 aa2.59□□□□□ -2
RBM39-233ENST00000482563 ROS1P08922 2347 aa2.58□□□□□ -2
RBM39-233ENST00000482563 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
RBM39-233ENST00000482563 KIAA0556O60303 1618 aa2.58□□□□□ -2
RBM39-233ENST00000482563 DEFB112Q30KQ8 113 aa2.58□□□□□ -2
RBM39-233ENST00000482563 ERCC6L2Q5T890 1561 aa2.57□□□□□ -2
RBM39-233ENST00000482563 TIAM2Q8IVF5 1701 aa2.56□□□□□ -2
RBM39-233ENST00000482563 DIP2AQ14689 1571 aa2.56□□□□□ -2
RBM39-233ENST00000482563 ASH1LQ9NR48 2969 aaKnown RBP2.56□□□□□ -2
RBM39-233ENST00000482563 TULP4Q9NRJ4 1543 aa2.56□□□□□ -2
RBM39-233ENST00000482563 C10orf95Q9H7T3 257 aa2.55□□□□□ -2
RBM39-233ENST00000482563 PAPPAQ13219 1627 aa2.55□□□□□ -2
RBM39-233ENST00000482563 CCDC180Q9P1Z9 1646 aa2.55□□□□□ -2
RBM39-233ENST00000482563 A0A0G2JMZ2 1700 aa2.55□□□□□ -2
RBM39-233ENST00000482563 PARP4Q9UKK3 1724 aaKnown RBP2.55□□□□□ -2
RBM39-233ENST00000482563 WIZO95785 1651 aa2.54□□□□□ -2
RBM39-233ENST00000482563 ANGP03950 147 aaKnown RBP2.54□□□□□ -2
RBM39-233ENST00000482563 UBR3Q6ZT12 1888 aa2.53□□□□□ -2
RBM39-233ENST00000482563 PLCH1Q4KWH8 1693 aa2.53□□□□□ -2
RBM39-233ENST00000482563 POLR1AO95602 1720 aaPredicted RBP2.52□□□□□ -2.01
RBM39-233ENST00000482563 FXYD6-FXYD2A0A087WZ82 144 aa2.52□□□□□ -2.01
RBM39-233ENST00000482563 SFTA3P0C7M3 94 aa2.52□□□□□ -2.01
RBM39-233ENST00000482563 WFDC9Q8NEX5 89 aa2.52□□□□□ -2.01
RBM39-233ENST00000482563 GAFA1Q96PS6 74 aa2.52□□□□□ -2.01
RBM39-233ENST00000482563 AHCTF1Q8WYP5 2266 aa2.52□□□□□ -2.01
RBM39-233ENST00000482563 NDUFB1O75438 58 aa2.51□□□□□ -2.01
RBM39-233ENST00000482563 C3orf79P0CE67 100 aa2.51□□□□□ -2.01
RBM39-233ENST00000482563 FXYD6P3P58550 94 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms