RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 H0Y9P7 68 aa1□□□□□ -2.25
TM9SF3-204ENST00000475401 WFDC2Q14508 124 aa1□□□□□ -2.25
TM9SF3-204ENST00000475401 LINC00643Q86TS7 51 aa1□□□□□ -2.25
TM9SF3-204ENST00000475401 CNFNQ9BYD5 112 aa1□□□□□ -2.25
TM9SF3-204ENST00000475401 SUPT6HQ7KZ85 1726 aaKnown RBP1□□□□□ -2.25
TM9SF3-204ENST00000475401 C5P01031 1676 aa1□□□□□ -2.25
TM9SF3-204ENST00000475401 ALKQ9UM73 1620 aa1□□□□□ -2.25
TM9SF3-204ENST00000475401 MEGF8Q7Z7M0 2845 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 DNAJC13O75165 2243 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 A0A0D9SFI3 127 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 D6R8Y8 96 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 I3L2K1 104 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 LEPROTL1O95214 131 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 S100A3P33764 101 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 MUSTN1Q8IVN3 82 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 DEFB107AQ8IZN7 70 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 S100A13Q99584 98 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 ST20Q9HBF5 79 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 UBE2D4Q9Y2X8 147 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 SPCS1Q9Y6A9 102 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.99□□□□□ -2.255e-10■■■■□ 22.2
TM9SF3-204ENST00000475401 KDM5DQ9BY66 1539 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 DCAF1Q9Y4B6 1507 aa0.99□□□□□ -2.25
TM9SF3-204ENST00000475401 IQCF6A8MYZ5 107 aa0.98□□□□□ -2.25
TM9SF3-204ENST00000475401 ACYP1P07311 99 aa0.98□□□□□ -2.25
TM9SF3-204ENST00000475401 FAM208BQ5VWN6 2430 aa0.98□□□□□ -2.25
TM9SF3-204ENST00000475401 LRRC9Q6ZRR7 1453 aa0.98□□□□□ -2.25
TM9SF3-204ENST00000475401 PAPPAQ13219 1627 aa0.97□□□□□ -2.25
TM9SF3-204ENST00000475401 SAMD9Q5K651 1589 aa0.97□□□□□ -2.25
TM9SF3-204ENST00000475401 LINC00959A0A1B0GUT2 108 aa0.97□□□□□ -2.25
TM9SF3-204ENST00000475401 COX6A2Q02221 97 aa0.97□□□□□ -2.25
TM9SF3-204ENST00000475401 KRTAP19-3Q7Z4W3 81 aa0.97□□□□□ -2.25
TM9SF3-204ENST00000475401 C6orf201Q7Z4U5 140 aa0.96□□□□□ -2.26
TM9SF3-204ENST00000475401 MAP3K1Q13233 1512 aa0.95□□□□□ -2.26
TM9SF3-204ENST00000475401 MYMXA0A1B0GTQ4 84 aa0.95□□□□□ -2.26
TM9SF3-204ENST00000475401 KANTRA0A1W2PQU2 76 aa0.95□□□□□ -2.26
TM9SF3-204ENST00000475401 IGLC3P0DOY3 106 aa0.95□□□□□ -2.26
TM9SF3-204ENST00000475401 TP53AIP1Q9HCN2 124 aa0.95□□□□□ -2.26
TM9SF3-204ENST00000475401 SLIT1O75093 1534 aa0.94□□□□□ -2.26
TM9SF3-204ENST00000475401 TRBV7-4A0A0J9YYF1 115 aa0.94□□□□□ -2.26
TM9SF3-204ENST00000475401 ADIRFQ15847 76 aa0.94□□□□□ -2.26
TM9SF3-204ENST00000475401 DEFB123Q8N688 67 aa0.94□□□□□ -2.26
TM9SF3-204ENST00000475401 RRBP1Q9P2E9 1410 aaKnown RBP0.94□□□□□ -2.26
TM9SF3-204ENST00000475401 ANKRD36A6QL64 1941 aa0.93□□□□□ -2.26
TM9SF3-204ENST00000475401 ATP7BP35670 1465 aa0.93□□□□□ -2.26
TM9SF3-204ENST00000475401 A0A1B0GU69 56 aa0.93□□□□□ -2.26
TM9SF3-204ENST00000475401 CFAP74Q9C0B2 1584 aa0.92□□□□□ -2.26
TM9SF3-204ENST00000475401 IGLC2P0DOY2 106 aa0.92□□□□□ -2.26
TM9SF3-204ENST00000475401 GNGT1P63211 74 aa0.92□□□□□ -2.26
TM9SF3-204ENST00000475401 PLGLAQ15195 96 aa0.92□□□□□ -2.26
TM9SF3-204ENST00000475401 AHCTF1Q8WYP5 2266 aa0.92□□□□□ -2.26
TM9SF3-204ENST00000475401 ANKRD17O75179 2603 aaKnown RBP0.92□□□□□ -2.26
TM9SF3-204ENST00000475401 BIVM-ERCC5R4GMW8 1640 aa0.91□□□□□ -2.26
TM9SF3-204ENST00000475401 PKD1L3Q7Z443 1732 aa0.91□□□□□ -2.26
TM9SF3-204ENST00000475401 BVES-AS1Q5T3Y7 98 aa0.9□□□□□ -2.27
TM9SF3-204ENST00000475401 PRO0255Q9UI72 69 aa0.9□□□□□ -2.27
TM9SF3-204ENST00000475401 PTPN23Q9H3S7 1636 aa0.89□□□□□ -2.27
TM9SF3-204ENST00000475401 LRRC37AA6NMS7 1700 aa0.89□□□□□ -2.27
TM9SF3-204ENST00000475401 CACNA1HO95180 2353 aa0.89□□□□□ -2.27
TM9SF3-204ENST00000475401 SETBP1Q9Y6X0 1596 aa0.89□□□□□ -2.27
TM9SF3-204ENST00000475401 DEFB121Q5J5C9 76 aa0.89□□□□□ -2.27
TM9SF3-204ENST00000475401 RGPD1P0DJD0 1748 aa0.89□□□□□ -2.27
TM9SF3-204ENST00000475401 NCOA2Q15596 1464 aa0.88□□□□□ -2.27
TM9SF3-204ENST00000475401 CEBPZOSA8MTT3 80 aa0.88□□□□□ -2.27
TM9SF3-204ENST00000475401 PIGYQ3MUY2 71 aa0.88□□□□□ -2.27
TM9SF3-204ENST00000475401 KIAA0556O60303 1618 aa0.88□□□□□ -2.27
TM9SF3-204ENST00000475401 ABCC1P33527 1531 aa0.88□□□□□ -2.27
TM9SF3-204ENST00000475401 ABCA8O94911 1581 aa0.87□□□□□ -2.27
TM9SF3-204ENST00000475401 LRRIQ1Q96JM4 1722 aa0.87□□□□□ -2.27
TM9SF3-204ENST00000475401 A0A1B0GUT8 65 aa0.87□□□□□ -2.27
TM9SF3-204ENST00000475401 FRAS1Q86XX4 4008 aa0.86□□□□□ -2.27
TM9SF3-204ENST00000475401 H3BUT2 72 aa0.86□□□□□ -2.27
TM9SF3-204ENST00000475401 KRTAP2-3P0C7H8 128 aa0.86□□□□□ -2.27
TM9SF3-204ENST00000475401 Q8IZM0 81 aa0.86□□□□□ -2.27
TM9SF3-204ENST00000475401 KRTAP2-4Q9BYR9 128 aa0.86□□□□□ -2.27
TM9SF3-204ENST00000475401 KRTAP2-1Q9BYU5 128 aa0.86□□□□□ -2.27
TM9SF3-204ENST00000475401 LTN1O94822 1766 aa0.85□□□□□ -2.27
TM9SF3-204ENST00000475401 KIF20BQ96Q89 1820 aa0.85□□□□□ -2.27
TM9SF3-204ENST00000475401 K7EQZ3 153 aa0.85□□□□□ -2.27
TM9SF3-204ENST00000475401 TTC28Q96AY4 2481 aa0.85□□□□□ -2.27
TM9SF3-204ENST00000475401 CEP170BQ9Y4F5 1589 aaPredicted RBP0.85□□□□□ -2.27
TM9SF3-204ENST00000475401 ZNF831Q5JPB2 1677 aa0.84□□□□□ -2.27
TM9SF3-204ENST00000475401 PPRC1Q5VV67 1664 aaKnown RBP0.84□□□□□ -2.27
TM9SF3-204ENST00000475401 QSER1Q2KHR3 1735 aa0.84□□□□□ -2.27
TM9SF3-204ENST00000475401 ANKARQ7Z5J8 1434 aa0.84□□□□□ -2.27
TM9SF3-204ENST00000475401 RGPD8O14715 1765 aaPredicted RBP0.84□□□□□ -2.27
TM9SF3-204ENST00000475401 RGPD2P0DJD1 1756 aa0.84□□□□□ -2.27
TM9SF3-204ENST00000475401 RGPD5Q99666 1765 aa0.84□□□□□ -2.27
TM9SF3-204ENST00000475401 C18orf32Q8TCD1 76 aa0.84□□□□□ -2.27
TM9SF3-204ENST00000475401 CCDC88BA6NC98 1476 aa0.84□□□□□ -2.28
TM9SF3-204ENST00000475401 USP32Q8NFA0 1604 aa0.83□□□□□ -2.28
TM9SF3-204ENST00000475401 PRH1P02810 166 aa0.83□□□□□ -2.28
TM9SF3-204ENST00000475401 NKTRP30414 1462 aaKnown RBP0.83□□□□□ -2.28
TM9SF3-204ENST00000475401 GOLGA4Q13439 2230 aaKnown RBP0.83□□□□□ -2.28
TM9SF3-204ENST00000475401 URB2Q14146 1524 aaKnown RBP0.82□□□□□ -2.28
TM9SF3-204ENST00000475401 SCN11AQ9UI33 1791 aa0.82□□□□□ -2.28
TM9SF3-204ENST00000475401 PIK3C2BO00750 1634 aa0.82□□□□□ -2.28
TM9SF3-204ENST00000475401 CCDC141Q6ZP82 1450 aa0.81□□□□□ -2.28
TM9SF3-204ENST00000475401 POLQO75417 2590 aa0.81□□□□□ -2.28
TM9SF3-204ENST00000475401 LRRC7Q96NW7 1537 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms