RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 C18orf65Q6ZTR6 163 aa3.75□□□□□ -1.81
PCGEM1-201ENST00000454040 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
PCGEM1-201ENST00000454040 CAMK2N2Q96S95 79 aa3.75□□□□□ -1.81
PCGEM1-201ENST00000454040 DSCR8Q96T75 97 aa3.75□□□□□ -1.81
PCGEM1-201ENST00000454040 B9D2Q9BPU9 175 aa3.75□□□□□ -1.81
PCGEM1-201ENST00000454040 XAGE1AQ9HD64 81 aa3.75□□□□□ -1.81
PCGEM1-201ENST00000454040 SPTBN4Q9H254 2564 aa3.74□□□□□ -1.81
PCGEM1-201ENST00000454040 IGLV7-46A0A075B6I9 117 aa3.74□□□□□ -1.81
PCGEM1-201ENST00000454040 I3L3M4 83 aa3.74□□□□□ -1.81
PCGEM1-201ENST00000454040 ZNF688P0C7X2 276 aa3.74□□□□□ -1.81
PCGEM1-201ENST00000454040 ATP5EP56381 51 aaPredicted RBP3.74□□□□□ -1.81
PCGEM1-201ENST00000454040 AKAP6Q13023 2319 aa3.73□□□□□ -1.81
PCGEM1-201ENST00000454040 SPTAN1Q13813 2472 aaKnown RBP3.73□□□□□ -1.81
PCGEM1-201ENST00000454040 IGKV3-7A0A075B6H7 116 aa3.73□□□□□ -1.81
PCGEM1-201ENST00000454040 IGLV4-69A0A075B6H9 119 aa3.73□□□□□ -1.81
PCGEM1-201ENST00000454040 LEPROTO15243 131 aa3.73□□□□□ -1.81
PCGEM1-201ENST00000454040 Q8N377 158 aa3.73□□□□□ -1.81
PCGEM1-201ENST00000454040 NHP2Q9NX24 153 aaKnown RBP3.73□□□□□ -1.81
PCGEM1-201ENST00000454040 IGLV1-50A0A075B6I6 118 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 ZNF815PA8K554 130 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 CFC1BP0CG36 223 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 UBE2D1P51668 147 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 CMC4P56277 68 aaPredicted RBP3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 DEFB1P60022 68 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 FP248Q71RG6 208 aaPredicted RBP3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 SBSPONQ8IVN8 264 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 C20orf203Q8NBC4 194 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 C4orf3Q8WVX3 66 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 TTTY13Q9BZ97 58 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 CELA1Q9UNI1 258 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 ASH1LQ9NR48 2969 aaKnown RBP3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 ITPR1Q14643 2758 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 A0A0J9YY99 117 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 TRBV7-7A0A0K0K1E9 115 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 NACAE9PAV3 2078 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 H3BMM0 161 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 ZNF56Q15929 161 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 SPINK13Q1W4C9 94 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 DEFB113Q30KQ7 82 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 DOPEY1Q5JWR5 2465 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 C15orf53Q8NAA6 179 aa3.72□□□□□ -1.81
PCGEM1-201ENST00000454040 TMEM223A0PJW6 202 aa3.71□□□□□ -1.82
PCGEM1-201ENST00000454040 C3orf84H3BNL1 204 aa3.71□□□□□ -1.82
PCGEM1-201ENST00000454040 TCL1BO95988 128 aa3.71□□□□□ -1.82
PCGEM1-201ENST00000454040 CD28P10747 220 aa3.71□□□□□ -1.82
PCGEM1-201ENST00000454040 FUSP35637 526 aaKnown RBP eCLIP3.71□□□□□ -1.82
PCGEM1-201ENST00000454040 SOSTDC1Q6X4U4 206 aa3.71□□□□□ -1.82
PCGEM1-201ENST00000454040 CAMK2N1Q7Z7J9 78 aa3.71□□□□□ -1.82
PCGEM1-201ENST00000454040 AMELXQ99217 191 aa3.71□□□□□ -1.82
PCGEM1-201ENST00000454040 LITAFQ99732 161 aa3.71□□□□□ -1.82
PCGEM1-201ENST00000454040 C8orf17Q9NRJ1 99 aa3.71□□□□□ -1.82
PCGEM1-201ENST00000454040 DOPEY2Q9Y3R5 2298 aa3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 UBE2D3P61077 147 aa3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 UBE2D2P62837 147 aa3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 RPL39P62891 51 aaKnown RBP3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 TMEM170BQ5T4T1 132 aa3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 FAM74A4Q5TZK3 123 aa3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 C10orf99Q6UWK7 81 aa3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 C3orf56Q8N813 242 aa3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 TIMM21Q9BVV7 248 aa3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 NCOR2Q9Y618 2525 aa3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 CSPG4Q6UVK1 2322 aa3.7□□□□□ -1.82
PCGEM1-201ENST00000454040 ATOX1O00244 68 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 TIMM17BO60830 172 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 INSP01308 110 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 IGKV3-20P01619 116 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 IGHV3-53P01767 116 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 IGHV3-30P01768 117 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 IGHV3-30-5P0DP03 117 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 DEFB131AP59861 70 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 NANOS2P60321 138 aaKnown RBP3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 CIRBPQ14011 172 aaKnown RBP3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 SS18Q15532 418 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 DEFB114Q30KQ6 69 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 NDUFA11Q86Y39 141 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 PPDPFLQ8WWR9 84 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 PRO1854Q9UHT4 67 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 CACNA1AO00555 2505 aa3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 ANKRD17O75179 2603 aaKnown RBP3.69□□□□□ -1.82
PCGEM1-201ENST00000454040 A0A0B4J2C4 111 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 ZNF22P17026 224 aaPredicted RBP3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 TSPEAR-AS2P59090 65 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 KLHL30-AS1Q8NEE0 82 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 DYNLRB2Q8TF09 96 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 LINC01600Q96MT4 127 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 PRO0461Q9UI25 63 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 PKD1L2Q7Z442 2459 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 CHD8Q9HCK8 2581 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 TRBV10-1A0A0K0K1A3 114 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 CFC1P0CG37 223 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 WFDC2Q14508 124 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 ASB16-AS1Q495Z4 193 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 RNASE13Q5GAN3 156 aaKnown RBP3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 CFAP126Q5VTH2 177 aa3.68□□□□□ -1.82
PCGEM1-201ENST00000454040 RELNP78509 3460 aa3.67□□□□□ -1.82
PCGEM1-201ENST00000454040 SORL1Q92673 2214 aa3.67□□□□□ -1.82
PCGEM1-201ENST00000454040 CELSR1Q9NYQ6 3014 aa3.67□□□□□ -1.82
PCGEM1-201ENST00000454040 K7ERS5 55 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms