RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 SMIM4Q8WVI0 70 aa3.07□□□□□ -1.92
XIST-201ENST00000416330 CFAP43Q8NDM7 1665 aa3.07□□□□□ -1.92
XIST-201ENST00000416330 IFT172Q9UG01 1749 aa3.07□□□□□ -1.92
XIST-201ENST00000416330 ALPK2Q86TB3 2170 aa3.07□□□□□ -1.92
XIST-201ENST00000416330 TRAV21A0A0B4J279 112 aa3.06□□□□□ -1.92
XIST-201ENST00000416330 J3QRE1 110 aa3.06□□□□□ -1.92
XIST-201ENST00000416330 ACYP2P14621 99 aa3.06□□□□□ -1.92
XIST-201ENST00000416330 COX17Q14061 63 aa3.06□□□□□ -1.92
XIST-201ENST00000416330 IGFL1Q6UW32 110 aa3.06□□□□□ -1.92
XIST-201ENST00000416330 TMEM263Q8WUH6 116 aaKnown RBP3.06□□□□□ -1.92
XIST-201ENST00000416330 ZNF236Q9UL36 1845 aa3.06□□□□□ -1.92
XIST-201ENST00000416330 SDK1Q7Z5N4 2213 aa3.05□□□□□ -1.92
XIST-201ENST00000416330 COL5A1P20908 1838 aaPredicted RBP3.05□□□□□ -1.92
XIST-201ENST00000416330 UGGT1Q9NYU2 1555 aa3.05□□□□□ -1.92
XIST-201ENST00000416330 SHROOM3Q8TF72 1996 aa3.05□□□□□ -1.92
XIST-201ENST00000416330 MAST1Q9Y2H9 1570 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 DNAJC13O75165 2243 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 FREM1Q5H8C1 2179 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 CAV3P56539 151 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 KRTAP12-2P59991 146 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 NREPQ16612 68 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 CCL19Q99731 98 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 WIZO95785 1651 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 ZNF831Q5JPB2 1677 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 NHSQ6T4R5 1651 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 NHSL1Q5SYE7 1610 aa3.04□□□□□ -1.92
XIST-201ENST00000416330 CPS1P31327 1500 aa3.03□□□□□ -1.92
XIST-201ENST00000416330 ANKRD50Q9ULJ7 1429 aa3.03□□□□□ -1.92
XIST-201ENST00000416330 NDUFB1O75438 58 aa3.03□□□□□ -1.92
XIST-201ENST00000416330 NCBP2-AS2Q69YL0 99 aa3.02□□□□□ -1.93
XIST-201ENST00000416330 Q6ZQY7 126 aa3.02□□□□□ -1.93
XIST-201ENST00000416330 RTTNQ86VV8 2226 aa3.02□□□□□ -1.93
XIST-201ENST00000416330 UBR3Q6ZT12 1888 aa3.02□□□□□ -1.93
XIST-201ENST00000416330 ZFHX3Q15911 3703 aa3.02□□□□□ -1.93
XIST-201ENST00000416330 PHRF1Q9P1Y6 1649 aaKnown RBP3.01□□□□□ -1.93
XIST-201ENST00000416330 FN1P02751 2386 aaKnown RBP3.01□□□□□ -1.93
XIST-201ENST00000416330 WFDC9Q8NEX5 89 aa3.01□□□□□ -1.93
XIST-201ENST00000416330 ZCCHC13Q8WW36 166 aaKnown RBP3.01□□□□□ -1.93
XIST-201ENST00000416330 NUP188Q5SRE5 1749 aa3.01□□□□□ -1.93
XIST-201ENST00000416330 ANKRD36A6QL64 1941 aa3.01□□□□□ -1.93
XIST-201ENST00000416330 PKD1L3Q7Z443 1732 aa3□□□□□ -1.93
XIST-201ENST00000416330 TIAM2Q8IVF5 1701 aa3□□□□□ -1.93
XIST-201ENST00000416330 TRBV30A0A0K0K1B3 111 aa3□□□□□ -1.93
XIST-201ENST00000416330 VWDEQ8N2E2 1590 aa3□□□□□ -1.93
XIST-201ENST00000416330 CROCC2H7BZ55 1655 aa2.99□□□□□ -1.93
XIST-201ENST00000416330 MYO7AQ13402 2215 aa2.99□□□□□ -1.93
XIST-201ENST00000416330 TSC2P49815 1807 aa2.99□□□□□ -1.93
XIST-201ENST00000416330 CICQ96RK0 1608 aaPredicted RBP2.99□□□□□ -1.93
XIST-201ENST00000416330 OBSCN-AS1Q96MR7 158 aa2.98□□□□□ -1.93
XIST-201ENST00000416330 C5P01031 1676 aa2.98□□□□□ -1.93
XIST-201ENST00000416330 PARP4Q9UKK3 1724 aaKnown RBP2.97□□□□□ -1.93
XIST-201ENST00000416330 SAMD9Q5K651 1589 aa2.97□□□□□ -1.93
XIST-201ENST00000416330 TRBV6-1A0A0K0K1D8 114 aa2.97□□□□□ -1.93
XIST-201ENST00000416330 LCE6AA0A183 80 aa2.97□□□□□ -1.93
XIST-201ENST00000416330 FCER1GP30273 86 aa2.97□□□□□ -1.93
XIST-201ENST00000416330 DEFB112Q30KQ8 113 aa2.97□□□□□ -1.93
XIST-201ENST00000416330 GAFA1Q96PS6 74 aa2.97□□□□□ -1.93
XIST-201ENST00000416330 ENHOQ6UWT2 76 aa2.96□□□□□ -1.94
XIST-201ENST00000416330 TOMM5Q8N4H5 51 aa2.96□□□□□ -1.94
XIST-201ENST00000416330 KIAA0556O60303 1618 aa2.96□□□□□ -1.94
XIST-201ENST00000416330 ABCC6O95255 1503 aa2.95□□□□□ -1.94
XIST-201ENST00000416330 LINC00959A0A1B0GUT2 108 aa2.95□□□□□ -1.94
XIST-201ENST00000416330 RICTORQ6R327 1708 aa2.95□□□□□ -1.94
XIST-201ENST00000416330 EFCAB6Q5THR3 1501 aa2.93□□□□□ -1.94
XIST-201ENST00000416330 ABCA5Q8WWZ7 1642 aa2.93□□□□□ -1.94
XIST-201ENST00000416330 FMN2Q9NZ56 1722 aa2.93□□□□□ -1.94
XIST-201ENST00000416330 A0A1B0GU69 56 aa2.93□□□□□ -1.94
XIST-201ENST00000416330 K7EMI3 77 aa2.93□□□□□ -1.94
XIST-201ENST00000416330 PRH1P02810 166 aa2.93□□□□□ -1.94
XIST-201ENST00000416330 BIVM-ERCC5R4GMW8 1640 aa2.93□□□□□ -1.94
XIST-201ENST00000416330 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.92□□□□□ -1.94
XIST-201ENST00000416330 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
XIST-201ENST00000416330 EIF2AK4Q9P2K8 1649 aaKnown RBP2.92□□□□□ -1.94
XIST-201ENST00000416330 COL14A1Q05707 1796 aaKnown RBP2.92□□□□□ -1.94
XIST-201ENST00000416330 INTS1Q8N201 2190 aaKnown RBP2.91□□□□□ -1.94
XIST-201ENST00000416330 G3V318 75 aa2.91□□□□□ -1.94
XIST-201ENST00000416330 Q6ZRX8 168 aa2.91□□□□□ -1.94
XIST-201ENST00000416330 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
XIST-201ENST00000416330 BCORQ6W2J9 1755 aa2.91□□□□□ -1.94
XIST-201ENST00000416330 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
XIST-201ENST00000416330 GVQW2A0A096LPI5 108 aaPredicted RBP2.89□□□□□ -1.95
XIST-201ENST00000416330 HAMPP81172 84 aa2.89□□□□□ -1.95
XIST-201ENST00000416330 C10orf99Q6UWK7 81 aa2.89□□□□□ -1.95
XIST-201ENST00000416330 UBL5Q9BZL1 73 aa2.89□□□□□ -1.95
XIST-201ENST00000416330 NCOA6Q14686 2063 aaPredicted RBP2.89□□□□□ -1.95
XIST-201ENST00000416330 MED13LQ71F56 2210 aa2.88□□□□□ -1.95
XIST-201ENST00000416330 SMIM11BQ8TCY0 68 aa2.88□□□□□ -1.95
XIST-201ENST00000416330 NMES1Q9C002 83 aa2.88□□□□□ -1.95
XIST-201ENST00000416330 A0A096LNT2 108 aa2.87□□□□□ -1.95
XIST-201ENST00000416330 KRTAP10-1P60331 282 aa2.87□□□□□ -1.95
XIST-201ENST00000416330 CMC2Q9NRP2 79 aa2.87□□□□□ -1.95
XIST-201ENST00000416330 SLIT1O75093 1534 aa2.87□□□□□ -1.95
XIST-201ENST00000416330 PAPPA2Q9BXP8 1791 aa2.87□□□□□ -1.95
XIST-201ENST00000416330 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
XIST-201ENST00000416330 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
XIST-201ENST00000416330 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
XIST-201ENST00000416330 SSBP3-AS1Q7Z2R9 100 aa2.86□□□□□ -1.95
XIST-201ENST00000416330 KIAA0586Q9BVV6 1533 aa2.86□□□□□ -1.95
XIST-201ENST00000416330 NDUFA4O00483 81 aa2.85□□□□□ -1.95
XIST-201ENST00000416330 NCR3O14931 201 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms