RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 POLR2JP52435 117 aaKnown RBP2.07□□□□□ -2.08
SMC4P1-201ENST00000414479 PFDN5Q99471 154 aa2.07□□□□□ -2.08
SMC4P1-201ENST00000414479 HECTD4Q9Y4D8 3996 aa2.07□□□□□ -2.08
SMC4P1-201ENST00000414479 PKHD1P08F94 4074 aa2.07□□□□□ -2.08
SMC4P1-201ENST00000414479 ABCA13Q86UQ4 5058 aa2.06□□□□□ -2.08
SMC4P1-201ENST00000414479 NUPR2A6NF83 97 aa2.06□□□□□ -2.08
SMC4P1-201ENST00000414479 IGF2P01344 180 aa2.06□□□□□ -2.08
SMC4P1-201ENST00000414479 CLLU1Q5K131 121 aa2.06□□□□□ -2.08
SMC4P1-201ENST00000414479 LYPD5Q6UWN5 251 aa2.06□□□□□ -2.08
SMC4P1-201ENST00000414479 ATP6V0E2Q8NHE4 81 aa2.06□□□□□ -2.08
SMC4P1-201ENST00000414479 DMAC1Q96GE9 116 aa2.06□□□□□ -2.08
SMC4P1-201ENST00000414479 HUWE1Q7Z6Z7 4374 aaKnown RBP2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 CSMD3Q7Z407 3707 aa2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 UQCRHLA0A096LP55 91 aa2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 TRBV30A0A0K0K1B3 111 aa2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 K7EIL1 84 aa2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 NCR2O95944 276 aa2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 BTG2P78543 158 aa2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 NCBP2-AS2Q69YL0 99 aa2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 PPDPFLQ8WWR9 84 aa2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 ATG5Q9H1Y0 275 aa2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 SAR1AQ9NR31 198 aa2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 MRPL35Q9NZE8 188 aaKnown RBP2.05□□□□□ -2.08
SMC4P1-201ENST00000414479 HIGD1CA8MV81 97 aa2.04□□□□□ -2.08
SMC4P1-201ENST00000414479 TSPAN19P0C672 248 aa2.04□□□□□ -2.08
SMC4P1-201ENST00000414479 IL7P13232 177 aa2.04□□□□□ -2.08
SMC4P1-201ENST00000414479 ATP11AUNQ6ZP68 121 aa2.04□□□□□ -2.08
SMC4P1-201ENST00000414479 SLC25A26Q70HW3 274 aa2.04□□□□□ -2.08
SMC4P1-201ENST00000414479 CTAGE3PQ8IX95 158 aa2.04□□□□□ -2.08
SMC4P1-201ENST00000414479 WFDC9Q8NEX5 89 aa2.04□□□□□ -2.08
SMC4P1-201ENST00000414479 STARD9Q9P2P6 4700 aa2.04□□□□□ -2.08
SMC4P1-201ENST00000414479 NOP16Q9Y3C1 178 aaKnown RBP2.04□□□□□ -2.08
SMC4P1-201ENST00000414479 IGLC6P0CF74 106 aa2.03□□□□□ -2.08
SMC4P1-201ENST00000414479 DEFB121Q5J5C9 76 aa2.03□□□□□ -2.08
SMC4P1-201ENST00000414479 ALMS1Q8TCU4 4167 aa2.03□□□□□ -2.08
SMC4P1-201ENST00000414479 PLECQ15149 4684 aaKnown RBP2.02□□□□□ -2.09
SMC4P1-201ENST00000414479 HSPG2P98160 4391 aa2.02□□□□□ -2.09
SMC4P1-201ENST00000414479 GLYATL3Q5SZD4 288 aa2.02□□□□□ -2.09
SMC4P1-201ENST00000414479 XAF1Q6GPH4 301 aa2.02□□□□□ -2.09
SMC4P1-201ENST00000414479 SNX29P2Q8IUI4 249 aa2.02□□□□□ -2.09
SMC4P1-201ENST00000414479 ATOH7Q8N100 152 aa2.02□□□□□ -2.09
SMC4P1-201ENST00000414479 Q8N6K4 173 aa2.02□□□□□ -2.09
SMC4P1-201ENST00000414479 KMT2AQ03164 3969 aa2.01□□□□□ -2.09
SMC4P1-201ENST00000414479 SRRM2Q9UQ35 2752 aaKnown RBP2.01□□□□□ -2.09
SMC4P1-201ENST00000414479 DNAH10Q8IVF4 4471 aa2.01□□□□□ -2.09
SMC4P1-201ENST00000414479 TRBV20-1A0A075B6N2 111 aa2.01□□□□□ -2.09
SMC4P1-201ENST00000414479 K7ERU9 68 aa2.01□□□□□ -2.09
SMC4P1-201ENST00000414479 HMGN1P05114 100 aa2.01□□□□□ -2.09
SMC4P1-201ENST00000414479 DEFB108BQ8NET1 73 aa2.01□□□□□ -2.09
SMC4P1-201ENST00000414479 M0R2P5 195 aa2□□□□□ -2.09
SMC4P1-201ENST00000414479 IGKCP01834 107 aa2□□□□□ -2.09
SMC4P1-201ENST00000414479 APOC1P02654 83 aa2□□□□□ -2.09
SMC4P1-201ENST00000414479 CCDC58Q4VC31 144 aa2□□□□□ -2.09
SMC4P1-201ENST00000414479 DYNLRB2Q8TF09 96 aa2□□□□□ -2.09
SMC4P1-201ENST00000414479 DOCK11Q5JSL3 2073 aa2□□□□□ -2.09
SMC4P1-201ENST00000414479 DYNC1H1Q14204 4646 aaKnown RBP1.99□□□□□ -2.09
SMC4P1-201ENST00000414479 ATP6V1G2-DDX39BF2Z307 99 aa1.99□□□□□ -2.09
SMC4P1-201ENST00000414479 J3QLW9 94 aa1.99□□□□□ -2.09
SMC4P1-201ENST00000414479 CAV3P56539 151 aa1.99□□□□□ -2.09
SMC4P1-201ENST00000414479 IQCJQ1A5X6 159 aa1.99□□□□□ -2.09
SMC4P1-201ENST00000414479 Q86TA4 180 aa1.99□□□□□ -2.09
SMC4P1-201ENST00000414479 NDUFA11Q86Y39 141 aa1.99□□□□□ -2.09
SMC4P1-201ENST00000414479 DYNLRB1Q9NP97 96 aa1.99□□□□□ -2.09
SMC4P1-201ENST00000414479 DNAH11Q96DT5 4516 aa1.99□□□□□ -2.09
SMC4P1-201ENST00000414479 CCL22O00626 93 aa1.98□□□□□ -2.09
SMC4P1-201ENST00000414479 DEFB112Q30KQ8 113 aa1.98□□□□□ -2.09
SMC4P1-201ENST00000414479 LSM2Q9Y333 95 aaKnown RBP1.98□□□□□ -2.09
SMC4P1-201ENST00000414479 TRBV10-1A0A0K0K1A3 114 aa1.97□□□□□ -2.09
SMC4P1-201ENST00000414479 LYNX1G3V0Z9 82 aa1.97□□□□□ -2.09
SMC4P1-201ENST00000414479 LINC00694P0DN24 101 aa1.97□□□□□ -2.09
SMC4P1-201ENST00000414479 FAT2Q9NYQ8 4349 aa1.97□□□□□ -2.09
SMC4P1-201ENST00000414479 VPS13DQ5THJ4 4388 aa1.96□□□□□ -2.09
SMC4P1-201ENST00000414479 FXYD6P3P58550 94 aa1.96□□□□□ -2.1
SMC4P1-201ENST00000414479 SARNPP82979 210 aaKnown RBP1.96□□□□□ -2.1
SMC4P1-201ENST00000414479 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SMC4P1-201ENST00000414479 DNAH6Q9C0G6 4158 aa1.95□□□□□ -2.1
SMC4P1-201ENST00000414479 APOC4-APOC2K7ER74 178 aa1.95□□□□□ -2.1
SMC4P1-201ENST00000414479 APOC2P02655 101 aa1.95□□□□□ -2.1
SMC4P1-201ENST00000414479 CCKP06307 115 aa1.95□□□□□ -2.1
SMC4P1-201ENST00000414479 TPT1P8Q9HAU6 139 aa1.95□□□□□ -2.1
SMC4P1-201ENST00000414479 DNAH2Q9P225 4427 aa1.94□□□□□ -2.1
SMC4P1-201ENST00000414479 CCDC179H3BU77 68 aa1.94□□□□□ -2.1
SMC4P1-201ENST00000414479 MRPL33O75394 65 aaKnown RBP1.94□□□□□ -2.1
SMC4P1-201ENST00000414479 COPZ1P61923 177 aa1.94□□□□□ -2.1
SMC4P1-201ENST00000414479 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
SMC4P1-201ENST00000414479 DNAH17Q9UFH2 4485 aa1.93□□□□□ -2.1
SMC4P1-201ENST00000414479 HMCN2Q8NDA2 5059 aa1.93□□□□□ -2.1
SMC4P1-201ENST00000414479 IFI6P09912 130 aa1.93□□□□□ -2.1
SMC4P1-201ENST00000414479 CCL8P80075 99 aa1.93□□□□□ -2.1
SMC4P1-201ENST00000414479 C10orf99Q6UWK7 81 aa1.93□□□□□ -2.1
SMC4P1-201ENST00000414479 TSC22D3Q99576 134 aa1.93□□□□□ -2.1
SMC4P1-201ENST00000414479 ERG28Q9UKR5 140 aa1.93□□□□□ -2.1
SMC4P1-201ENST00000414479 FAM236AA0A1B0GUQ0 79 aa1.92□□□□□ -2.1
SMC4P1-201ENST00000414479 FAM236BA0A1B0GV22 79 aa1.92□□□□□ -2.1
SMC4P1-201ENST00000414479 LOC101927531A0A1B0GV80 90 aa1.92□□□□□ -2.1
SMC4P1-201ENST00000414479 NPFFO15130 113 aa1.92□□□□□ -2.1
SMC4P1-201ENST00000414479 LY6G6CO95867 125 aa1.92□□□□□ -2.1
SMC4P1-201ENST00000414479 RPS25P62851 125 aaKnown RBP1.92□□□□□ -2.1
SMC4P1-201ENST00000414479 FXYD3Q14802 87 aa1.92□□□□□ -2.1
SMC4P1-201ENST00000414479 SLC48A1Q6P1K1 146 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms