RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 M0R1W7 72 aa3.92□□□□□ -1.78
CLK1-202ENST00000409403 NDUFA1O15239 70 aa3.92□□□□□ -1.78
CLK1-202ENST00000409403 LOXP28300 417 aaPredicted RBP3.92□□□□□ -1.78
CLK1-202ENST00000409403 RPL39P62891 51 aaKnown RBP3.92□□□□□ -1.78
CLK1-202ENST00000409403 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
CLK1-202ENST00000409403 LINC00336Q6ZUF6 198 aa3.92□□□□□ -1.78
CLK1-202ENST00000409403 C20orf203Q8NBC4 194 aa3.92□□□□□ -1.78
CLK1-202ENST00000409403 NPBQ8NG41 125 aa3.92□□□□□ -1.78
CLK1-202ENST00000409403 DEFB127Q9H1M4 99 aa3.92□□□□□ -1.78
CLK1-202ENST00000409403 PRR14LQ5THK1 2151 aa3.92□□□□□ -1.78
CLK1-202ENST00000409403 IGLV4-3A0A075B6K6 122 aa3.91□□□□□ -1.78
CLK1-202ENST00000409403 TRAV13-2A0A0B4J235 113 aa3.91□□□□□ -1.78
CLK1-202ENST00000409403 SOCS3O14543 225 aa3.91□□□□□ -1.78
CLK1-202ENST00000409403 CD28P10747 220 aa3.91□□□□□ -1.78
CLK1-202ENST00000409403 PKIGQ9Y2B9 76 aa3.91□□□□□ -1.78
CLK1-202ENST00000409403 UBE2D4Q9Y2X8 147 aa3.91□□□□□ -1.78
CLK1-202ENST00000409403 TRAV12-3A0A0B4J271 114 aa3.9□□□□□ -1.78
CLK1-202ENST00000409403 A0A0J9YXV3 536 aa3.9□□□□□ -1.78
CLK1-202ENST00000409403 H0YGX0 51 aa3.9□□□□□ -1.78
CLK1-202ENST00000409403 CTSGP08311 255 aa3.9□□□□□ -1.78
CLK1-202ENST00000409403 APRG1Q8IVJ8 170 aa3.9□□□□□ -1.78
CLK1-202ENST00000409403 CYSTM1Q9H1C7 97 aa3.9□□□□□ -1.78
CLK1-202ENST00000409403 KIF25-AS1Q9Y6Z4 181 aa3.9□□□□□ -1.78
CLK1-202ENST00000409403 MALRD1Q5VYJ5 2156 aa3.9□□□□□ -1.78
CLK1-202ENST00000409403 ABCA13Q86UQ4 5058 aa3.9□□□□□ -1.78
CLK1-202ENST00000409403 DNAH1Q9P2D7 4330 aa3.9□□□□□ -1.78
CLK1-202ENST00000409403 IGHV3-64A0A075B6Q5 118 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 TRAV7A0A075B6U4 112 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 KRTAP29-1A8MX34 341 aaPredicted RBP3.9□□□□□ -1.79
CLK1-202ENST00000409403 XCL1P47992 114 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 C6orf226Q5I0X4 101 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 IGFL2Q6UWQ7 119 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 LINC01561Q8N1V8 128 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 ZFAND2AQ8N6M9 145 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 LINC00308Q8TCZ7 52 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 OBSCN-AS1Q96MR7 158 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 XCL2Q9UBD3 114 aa3.9□□□□□ -1.79
CLK1-202ENST00000409403 PLXNB1O43157 2135 aa3.89□□□□□ -1.79
CLK1-202ENST00000409403 IGKV3D-7A0A0C4DH55 119 aa3.89□□□□□ -1.79
CLK1-202ENST00000409403 FAM223BA6NKX1 122 aa3.89□□□□□ -1.79
CLK1-202ENST00000409403 PRB4P10163 310 aaPredicted RBP3.89□□□□□ -1.79
CLK1-202ENST00000409403 RPL28P46779 137 aaKnown RBP3.89□□□□□ -1.79
CLK1-202ENST00000409403 LINC00315P59091 139 aa3.89□□□□□ -1.79
CLK1-202ENST00000409403 KLKP1Q107X0 134 aa3.89□□□□□ -1.79
CLK1-202ENST00000409403 KLK9Q2XQG4 91 aa3.89□□□□□ -1.79
CLK1-202ENST00000409403 ADAMTSL4-AS1Q5T5F5 129 aa3.89□□□□□ -1.79
CLK1-202ENST00000409403 KLK9Q9UKQ9 250 aa3.89□□□□□ -1.79
CLK1-202ENST00000409403 JMJD7-PLA2G4BH0Y9G9 81 aa3.88□□□□□ -1.79
CLK1-202ENST00000409403 CRPP02741 224 aa3.88□□□□□ -1.79
CLK1-202ENST00000409403 RNASE3P12724 160 aaKnown RBP3.88□□□□□ -1.79
CLK1-202ENST00000409403 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
CLK1-202ENST00000409403 DPM3Q9P2X0 92 aa3.88□□□□□ -1.79
CLK1-202ENST00000409403 H7BZZ5 65 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 CCKP06307 115 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 PRR9Q5T870 116 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 VMO1Q7Z5L0 202 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 C1orf158Q8N1D5 194 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 BRK1Q8WUW1 75 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 UBL5Q9BZL1 73 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 CADP27708 2225 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 KIAA1109Q2LD37 5005 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 ROS1P08922 2347 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 M0QY20 66 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 TRBV12-3P01733 135 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 CCL19Q99731 98 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 C16orf95Q9H693 158 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 LINC00846Q9NV44 126 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 S4R3C0 116 aa3.87□□□□□ -1.79
CLK1-202ENST00000409403 DNAJC13O75165 2243 aa3.86□□□□□ -1.79
CLK1-202ENST00000409403 A0A087WVE0 104 aa3.86□□□□□ -1.79
CLK1-202ENST00000409403 PRB2P02812 416 aaPredicted RBP3.86□□□□□ -1.79
CLK1-202ENST00000409403 COX7A1P24310 79 aa3.86□□□□□ -1.79
CLK1-202ENST00000409403 BLCAPP62952 87 aa3.86□□□□□ -1.79
CLK1-202ENST00000409403 RBM3P98179 157 aaKnown RBP3.86□□□□□ -1.79
CLK1-202ENST00000409403 C15orf32Q32M92 178 aa3.86□□□□□ -1.79
CLK1-202ENST00000409403 LYPD5Q6UWN5 251 aa3.86□□□□□ -1.79
CLK1-202ENST00000409403 FAM223AQ8IWN6 122 aa3.86□□□□□ -1.79
CLK1-202ENST00000409403 CCL17Q92583 94 aa3.86□□□□□ -1.79
CLK1-202ENST00000409403 C14orf132Q9NPU4 83 aa3.86□□□□□ -1.79
CLK1-202ENST00000409403 C22orf24Q9Y442 160 aa3.86□□□□□ -1.79
CLK1-202ENST00000409403 A0A087WZ39 114 aa3.85□□□□□ -1.79
CLK1-202ENST00000409403 TMEM89A2RUT3 159 aa3.85□□□□□ -1.79
CLK1-202ENST00000409403 CLPSL1A2RUU4 121 aa3.85□□□□□ -1.79
CLK1-202ENST00000409403 IGHV3-23P01764 117 aa3.85□□□□□ -1.79
CLK1-202ENST00000409403 LYPD2Q6UXB3 125 aa3.85□□□□□ -1.79
CLK1-202ENST00000409403 Q8N2B8 174 aa3.85□□□□□ -1.79
CLK1-202ENST00000409403 ORMDL1Q9P0S3 153 aa3.85□□□□□ -1.79
CLK1-202ENST00000409403 TRBV7-6A0A0J9YX20 115 aa3.84□□□□□ -1.79
CLK1-202ENST00000409403 KLLNB2CW77 178 aa3.84□□□□□ -1.79
CLK1-202ENST00000409403 GNRH2O43555 120 aa3.84□□□□□ -1.79
CLK1-202ENST00000409403 DYNLRB2Q8TF09 96 aa3.84□□□□□ -1.79
CLK1-202ENST00000409403 OPRPNQ99935 248 aaPredicted RBP3.84□□□□□ -1.79
CLK1-202ENST00000409403 TRAV23DV6A0A075B6W5 121 aa3.84□□□□□ -1.8
CLK1-202ENST00000409403 PLAC8L1A1L4L8 177 aa3.84□□□□□ -1.8
CLK1-202ENST00000409403 ERC2-IT1O76042 136 aa3.84□□□□□ -1.8
CLK1-202ENST00000409403 MINOS1Q5TGZ0 78 aa3.84□□□□□ -1.8
CLK1-202ENST00000409403 FAM74A4Q5TZK3 123 aa3.84□□□□□ -1.8
CLK1-202ENST00000409403 FP248Q71RG6 208 aaPredicted RBP3.84□□□□□ -1.8
CLK1-202ENST00000409403 PRR15Q8IV56 129 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms